RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SEZ6LQ9BYH1 1024 aa9.07□□□□□ -0.96
GPNMB-201ENST00000258733 SPATA7Q9P0W8 599 aa9.07□□□□□ -0.96
GPNMB-201ENST00000258733 N6AMT1Q9Y5N5 214 aa9.07□□□□□ -0.96
GPNMB-201ENST00000258733 USP19O94966 1318 aa9.07□□□□□ -0.96
GPNMB-201ENST00000258733 F8VZ95 297 aa9.07□□□□□ -0.96
GPNMB-201ENST00000258733 ZBED6P86452 979 aa9.07□□□□□ -0.96
GPNMB-201ENST00000258733 SOGA3Q5TF21 947 aa9.07□□□□□ -0.96
GPNMB-201ENST00000258733 HMGB1P1B2RPK0 211 aaPredicted RBP9.06□□□□□ -0.96
GPNMB-201ENST00000258733 GPS2Q13227 327 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 GBP6Q6ZN66 633 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 C3orf20Q8ND61 904 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 GOLGA5Q8TBA6 731 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 PMM1Q92871 262 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 TMEM98Q9Y2Y6 226 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 CFAP69A5D8W1 941 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 SGSM2O43147 1006 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 CBFA2T2O43439 604 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 MYO1BO43795 1136 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 KRT38O76015 456 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 VDRP11473 427 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 CYP11B2P19099 503 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 HDLBPQ00341 1268 aaKnown RBP9.06□□□□□ -0.96
GPNMB-201ENST00000258733 CRYMQ14894 314 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 PREPLQ4J6C6 727 aaPredicted RBP9.06□□□□□ -0.96
GPNMB-201ENST00000258733 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 AMOTL1Q8IY63 956 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 PARD3BQ8TEW8 1205 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 GBP4Q96PP9 640 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 SPTLC3Q9NUV7 552 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 HMMRO75330 724 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 CA8P35219 290 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 USP8P40818 1118 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 NEDD9Q14511 834 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 FILIP1LQ4L180 1135 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 SPC24Q8NBT2 197 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 FAM81BQ96LP2 452 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
GPNMB-201ENST00000258733 UNCXA6NJT0 531 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 EIF3CLB5ME19 914 aaKnown RBP9.05□□□□□ -0.96
GPNMB-201ENST00000258733 RRP1P56182 461 aaKnown RBP9.05□□□□□ -0.96
GPNMB-201ENST00000258733 NUCB2P80303 420 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 PTK7Q13308 1070 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 SPATA21Q7Z572 469 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 ZNF397Q8NF99 534 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-201ENST00000258733 VTI1AQ96AJ9 217 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 EIF3CQ99613 913 aaKnown RBP9.05□□□□□ -0.96
GPNMB-201ENST00000258733 KLHL42Q9P2K6 505 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 DIS3Q9Y2L1 958 aaKnown RBP9.05□□□□□ -0.96
GPNMB-201ENST00000258733 KIF27Q86VH2 1401 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 RAB27AP51159 221 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 USP4Q13107 963 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 FXNQ16595 210 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 ARMC9Q7Z3E5 817 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 ANKRD18AQ8IVF6 992 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 RBM17Q96I25 401 aaKnown RBP9.05□□□□□ -0.96
GPNMB-201ENST00000258733 RMDN2Q96LZ7 410 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 TBC1D2Q9BYX2 928 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 LRRC27Q9C0I9 530 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 ARHGAP35Q9NRY4 1499 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 MKS1Q9NXB0 559 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 MRFAP1Q9Y605 127 aa9.05□□□□□ -0.96
GPNMB-201ENST00000258733 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-201ENST00000258733 BAG4O95429 457 aaKnown RBP9.04□□□□□ -0.96
GPNMB-201ENST00000258733 MAGEA10P43363 369 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-201ENST00000258733 NBPF8Q3BBV2 869 aa9.04□□□□□ -0.96
GPNMB-201ENST00000258733 LARP1BQ659C4 914 aaKnown RBP9.04□□□□□ -0.96
GPNMB-201ENST00000258733 USP25Q9UHP3 1055 aa9.04□□□□□ -0.96
GPNMB-201ENST00000258733 TIAM1Q13009 1591 aa9.04□□□□□ -0.96
GPNMB-201ENST00000258733 GAPVD1Q14C86 1478 aa9.04□□□□□ -0.96
GPNMB-201ENST00000258733 ANKRD13BQ86YJ7 626 aa9.04□□□□□ -0.96
GPNMB-201ENST00000258733 KIAA0825Q8IV33 1275 aa9.04□□□□□ -0.96
GPNMB-201ENST00000258733 MYOCDQ8IZQ8 938 aa9.04□□□□□ -0.96
GPNMB-201ENST00000258733 IQUBQ8NA54 791 aa9.04□□□□□ -0.96
GPNMB-201ENST00000258733 CTCFLQ8NI51 663 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-201ENST00000258733 TARBP1Q13395 1621 aaKnown RBP9.04□□□□□ -0.96
GPNMB-201ENST00000258733 SCAPERQ9BY12 1400 aa9.04□□□□□ -0.96
GPNMB-201ENST00000258733 MYCLP1P12525 358 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-201ENST00000258733 ZNF445P59923 1031 aa9.03□□□□□ -0.96
GPNMB-201ENST00000258733 PKN1Q16512 942 aa9.03□□□□□ -0.96
GPNMB-201ENST00000258733 SMC5Q8IY18 1101 aa9.03□□□□□ -0.96
GPNMB-201ENST00000258733 CCDC47Q96A33 483 aaKnown RBP9.03□□□□□ -0.96
GPNMB-201ENST00000258733 SYAP1Q96A49 352 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-201ENST00000258733 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
GPNMB-201ENST00000258733 COMMD10Q9Y6G5 202 aa9.03□□□□□ -0.96
GPNMB-201ENST00000258733 MMEP08473 750 aa9.03□□□□□ -0.96
GPNMB-201ENST00000258733 SMARCA1P28370 1054 aa9.03□□□□□ -0.96
GPNMB-201ENST00000258733 HOXA10P31260 410 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-201ENST00000258733 LRRC31Q6UY01 552 aa9.03□□□□□ -0.96
GPNMB-201ENST00000258733 PHACTR1Q9C0D0 580 aa9.03□□□□□ -0.96
GPNMB-201ENST00000258733 RSPH9Q9H1X1 276 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-201ENST00000258733 ZSCAN16Q9H4T2 348 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-201ENST00000258733 FBXO9Q9UK97 447 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-201ENST00000258733 GCKP35557 465 aa9.02□□□□□ -0.96
GPNMB-201ENST00000258733 ZRSR1Q15695 479 aaKnown RBP9.02□□□□□ -0.96
GPNMB-201ENST00000258733 PARP9Q8IXQ6 854 aa9.02□□□□□ -0.96
GPNMB-201ENST00000258733 CLASRPQ8N2M8 674 aaKnown RBP9.02□□□□□ -0.96
GPNMB-201ENST00000258733 C1orf131Q8NDD1 294 aaKnown RBP9.02□□□□□ -0.96
GPNMB-201ENST00000258733 EZH1Q92800 747 aaPredicted RBP9.02□□□□□ -0.96
GPNMB-201ENST00000258733 N4BP2L2Q92802 583 aaPredicted RBP9.02□□□□□ -0.96
GPNMB-201ENST00000258733 KCNN1Q92952 543 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms