RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 PSMA5P28066 241 aa17.56■□□□□ 0.4
CAB39-201ENST00000258418 HAND2P61296 217 aa17.56■□□□□ 0.4
CAB39-201ENST00000258418 KSR2Q6VAB6 950 aa17.56■□□□□ 0.4
CAB39-201ENST00000258418 DNM1Q05193 864 aaKnown RBP17.55■□□□□ 0.4
CAB39-201ENST00000258418 ANKRD13DQ6ZTN6 518 aa17.55■□□□□ 0.4
CAB39-201ENST00000258418 AATKQ6ZMQ8 1374 aa17.55■□□□□ 0.4
CAB39-201ENST00000258418 BECN2A8MW95 431 aa17.55■□□□□ 0.4
CAB39-201ENST00000258418 NMIQ13287 307 aaPredicted RBP17.55■□□□□ 0.4
CAB39-201ENST00000258418 CCDC129Q6ZRS4 1044 aa17.55■□□□□ 0.4
CAB39-201ENST00000258418 ATP7BP35670 1465 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 MROH1Q8NDA8 1641 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 CHAF1AQ13111 956 aaPredicted RBP17.54■□□□□ 0.4
CAB39-201ENST00000258418 CREBRFQ8IUR6 639 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 SUCLG2Q96I99 432 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 HYPKQ9NX55 129 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 NRXN1Q9ULB1 1477 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 FRMPD1Q5SYB0 1578 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 DIP2CQ9Y2E4 1556 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
CAB39-201ENST00000258418 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 ZSCAN30Q86W11 494 aa17.54■□□□□ 0.4
CAB39-201ENST00000258418 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
CAB39-201ENST00000258418 LMBRD1Q9NUN5 540 aa17.53■□□□□ 0.4
CAB39-201ENST00000258418 TMEM63CQ9P1W3 806 aa17.53■□□□□ 0.4
CAB39-201ENST00000258418 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
CAB39-201ENST00000258418 MYOM1P52179 1685 aa17.53■□□□□ 0.4
CAB39-201ENST00000258418 RASEFQ8IZ41 740 aa17.53■□□□□ 0.4
CAB39-201ENST00000258418 LMTK2Q8IWU2 1503 aa17.53■□□□□ 0.4
CAB39-201ENST00000258418 BRPF1P55201 1214 aaPredicted RBP17.53■□□□□ 0.4
CAB39-201ENST00000258418 GOLGA6L19H0YKK7 550 aa17.52■□□□□ 0.4
CAB39-201ENST00000258418 PIK3C2BO00750 1634 aa17.52■□□□□ 0.4
CAB39-201ENST00000258418 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.4
CAB39-201ENST00000258418 PTH1RQ03431 593 aa17.52■□□□□ 0.39
CAB39-201ENST00000258418 RRP12Q5JTH9 1297 aaKnown RBP17.52■□□□□ 0.39
CAB39-201ENST00000258418 TRIM5Q9C035 493 aa17.52■□□□□ 0.39
CAB39-201ENST00000258418 KIAA0232Q92628 1395 aa17.52■□□□□ 0.39
CAB39-201ENST00000258418 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
CAB39-201ENST00000258418 USP16Q9Y5T5 823 aa17.51■□□□□ 0.39
CAB39-201ENST00000258418 TIMM10P62072 90 aa17.51■□□□□ 0.39
CAB39-201ENST00000258418 KRT85P78386 507 aa17.51■□□□□ 0.39
CAB39-201ENST00000258418 SASS6Q6UVJ0 657 aa17.51■□□□□ 0.39
CAB39-201ENST00000258418 SNX14Q9Y5W7 946 aa17.51■□□□□ 0.39
CAB39-201ENST00000258418 TULP1O00294 542 aaPredicted RBP17.51■□□□□ 0.39
CAB39-201ENST00000258418 SPATA32Q96LK8 384 aa17.51■□□□□ 0.39
CAB39-201ENST00000258418 VWDEQ8N2E2 1590 aa17.5■□□□□ 0.39
CAB39-201ENST00000258418 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
CAB39-201ENST00000258418 SYT1P21579 422 aa17.5■□□□□ 0.39
CAB39-201ENST00000258418 RALYLQ86SE5 291 aaKnown RBP17.5■□□□□ 0.39
CAB39-201ENST00000258418 EVI5LQ96CN4 794 aa17.5■□□□□ 0.39
CAB39-201ENST00000258418 PTCH1Q13635 1447 aa17.5■□□□□ 0.39
CAB39-201ENST00000258418 CCDC57Q2TAC2 916 aa17.5■□□□□ 0.39
CAB39-201ENST00000258418 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
CAB39-201ENST00000258418 SDF4Q9BRK5 362 aa17.5■□□□□ 0.39
CAB39-201ENST00000258418 TLR7Q9NYK1 1049 aaKnown RBP17.5■□□□□ 0.39
CAB39-201ENST00000258418 CD163L1Q9NR16 1453 aa17.5■□□□□ 0.39
CAB39-201ENST00000258418 TFCP2Q12800 502 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 NFXL1Q6ZNB6 911 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 IFNL2Q8IZJ0 200 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 CNNM1Q9NRU3 951 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
CAB39-201ENST00000258418 CDK12Q9NYV4 1490 aaPredicted RBP17.49■□□□□ 0.39
CAB39-201ENST00000258418 SGSM2O43147 1006 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 TTC39AQ5SRH9 613 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.49■□□□□ 0.39
CAB39-201ENST00000258418 CCDC82Q8N4S0 544 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 GPT2Q8TD30 523 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 BRF1Q92994 677 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
CAB39-201ENST00000258418 TNMDQ9H2S6 317 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 CCDC39Q9UFE4 941 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 CFAP74Q9C0B2 1584 aa17.49■□□□□ 0.39
CAB39-201ENST00000258418 MYO3AQ8NEV4 1616 aa17.48■□□□□ 0.39
CAB39-201ENST00000258418 IDH1O75874 414 aaKnown RBP17.48■□□□□ 0.39
CAB39-201ENST00000258418 ADCK5Q3MIX3 580 aa17.48■□□□□ 0.39
CAB39-201ENST00000258418 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
CAB39-201ENST00000258418 EAF2Q96CJ1 260 aaPredicted RBP17.48■□□□□ 0.39
CAB39-201ENST00000258418 ZSCAN22P10073 491 aaPredicted RBP17.48■□□□□ 0.39
CAB39-201ENST00000258418 CLCN1P35523 988 aa17.48■□□□□ 0.39
CAB39-201ENST00000258418 BEND3Q5T5X7 828 aa17.48■□□□□ 0.39
CAB39-201ENST00000258418 TTC12Q9H892 705 aaPredicted RBP17.48■□□□□ 0.39
CAB39-201ENST00000258418 ME1P48163 572 aa17.47■□□□□ 0.39
CAB39-201ENST00000258418 SSH3Q8TE77 659 aa17.47■□□□□ 0.39
CAB39-201ENST00000258418 ARHGEF10O15013 1369 aa17.47■□□□□ 0.39
CAB39-201ENST00000258418 HIP1O00291 1037 aa17.47■□□□□ 0.39
CAB39-201ENST00000258418 GIGYF1O75420 1035 aaPredicted RBP17.47■□□□□ 0.39
CAB39-201ENST00000258418 IFIT1P09914 478 aaKnown RBP17.47■□□□□ 0.39
CAB39-201ENST00000258418 SEC62Q99442 399 aaKnown RBP17.47■□□□□ 0.39
CAB39-201ENST00000258418 DBNDD2Q9BQY9 259 aa17.47■□□□□ 0.39
CAB39-201ENST00000258418 IL25Q9H293 177 aa17.47■□□□□ 0.39
CAB39-201ENST00000258418 A1BGP04217 495 aa17.47■□□□□ 0.39
CAB39-201ENST00000258418 LRSAM1Q6UWE0 723 aa17.47■□□□□ 0.39
CAB39-201ENST00000258418 C17orf53Q8N3J3 647 aaPredicted RBP17.47■□□□□ 0.39
CAB39-201ENST00000258418 TRDNQ13061 729 aa17.46■□□□□ 0.39
CAB39-201ENST00000258418 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
CAB39-201ENST00000258418 CCDC73Q6ZRK6 1079 aa17.46■□□□□ 0.39
CAB39-201ENST00000258418 AXIN2Q9Y2T1 843 aa17.46■□□□□ 0.39
CAB39-201ENST00000258418 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.39
CAB39-201ENST00000258418 SNRPA1P09661 255 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms