RNA–Protein interactions for RNA: ENST00000255674.11

RTTN-201, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 6,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-201ENST00000255674 NPHP3Q7Z494 1330 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 KCNH5Q8NCM2 988 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 TOMM22Q9NS69 142 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 CNTNAP2Q9UHC6 1331 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 LRRC10BA6NIK2 292 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 SLC15A2Q16348 729 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 CT47A1Q5JQC4 288 aaPredicted RBP4.47□□□□□ -1.69
RTTN-201ENST00000255674 VGLL2Q8N8G2 317 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 HIRIP3Q9BW71 556 aaPredicted RBP4.47□□□□□ -1.69
RTTN-201ENST00000255674 USP20Q9Y2K6 914 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 ATRNL1Q5VV63 1379 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 NUTM2FA1L443 756 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 SPOCK2Q92563 424 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 MBOAT7Q96N66 472 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 ISCA1Q9BUE6 129 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 BEGAINQ9BUH8 593 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 PGAP2Q9UHJ9 254 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 THRAP3Q9Y2W1 955 aaKnown RBP4.47□□□□□ -1.69
RTTN-201ENST00000255674 ELP1O95163 1332 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 APBB1O00213 710 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 NFE2L2Q16236 605 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 RC3H1Q5TC82 1133 aaKnown RBP4.47□□□□□ -1.69
RTTN-201ENST00000255674 SIRT2Q8IXJ6 389 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 CACNA1FO60840 1977 aa4.47□□□□□ -1.69
RTTN-201ENST00000255674 KIAA1551Q9HCM1 1747 aa4.46□□□□□ -1.69
RTTN-201ENST00000255674 FRAT1Q92837 279 aaPredicted RBP4.46□□□□□ -1.69
RTTN-201ENST00000255674 TERF2IPQ9NYB0 399 aa4.46□□□□□ -1.7
RTTN-201ENST00000255674 COL5A3P25940 1745 aaPredicted RBP4.46□□□□□ -1.7
RTTN-201ENST00000255674 UQCRHLA0A096LP55 91 aa4.46□□□□□ -1.7
RTTN-201ENST00000255674 UQCRHP07919 91 aa4.46□□□□□ -1.7
RTTN-201ENST00000255674 RGL3Q3MIN7 710 aa4.46□□□□□ -1.7
RTTN-201ENST00000255674 EIF5P55010 431 aaKnown RBP4.46□□□□□ -1.7
RTTN-201ENST00000255674 CRYGNQ8WXF5 182 aa4.46□□□□□ -1.7
RTTN-201ENST00000255674 R3HCC1Q9Y3T6 440 aaKnown RBP4.46□□□□□ -1.7
RTTN-201ENST00000255674 COL14A1Q05707 1796 aaKnown RBP4.46□□□□□ -1.7
RTTN-201ENST00000255674 RGS3P49796 1198 aa4.46□□□□□ -1.7
RTTN-201ENST00000255674 SGIP1Q9BQI5 828 aa4.46□□□□□ -1.7
RTTN-201ENST00000255674 CLEC11AQ9Y240 323 aa4.46□□□□□ -1.7
RTTN-201ENST00000255674 LTBP3Q9NS15 1303 aa4.46□□□□□ -1.7
RTTN-201ENST00000255674 C8orf34Q49A92 452 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 CADPS2Q86UW7 1296 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 ZNF710Q8N1W2 664 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 RUNDC1Q96C34 613 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 FUCA2Q9BTY2 467 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 SPINK5Q9NQ38 1064 aaPredicted RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 CNTNAP4Q9C0A0 1308 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 B3GNT9Q6UX72 402 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 CARD10Q9BWT7 1032 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 UBXN6Q9BZV1 441 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 MAGEC2Q9UBF1 373 aaPredicted RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 NKX3-2P78367 333 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 C1orf131Q8NDD1 294 aaKnown RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 WWC3Q9ULE0 1092 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 SPATA31A6Q5VVP1 1343 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 ZBED3Q96IU2 234 aaPredicted RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 CCDC43Q96MW1 224 aaKnown RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 CHMP4BQ9H444 224 aaKnown RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 ITGB4P16144 1822 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 DHX16O60231 1041 aaKnown RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 FGFR2P21802 821 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 NOP2P46087 812 aaKnown RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 LTV1Q96GA3 475 aaPredicted RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 PMM2O15305 246 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 MKRN3Q13064 507 aaKnown RBP4.45□□□□□ -1.7
RTTN-201ENST00000255674 DMRT2Q9Y5R5 561 aa4.45□□□□□ -1.7
RTTN-201ENST00000255674 BIN2Q9UBW5 565 aaPredicted RBP4.44□□□□□ -1.7
RTTN-201ENST00000255674 KNSTRNQ9Y448 316 aa4.44□□□□□ -1.7
RTTN-201ENST00000255674 PATL2C9JE40 543 aaKnown RBP4.44□□□□□ -1.7
RTTN-201ENST00000255674 VTI1AQ96AJ9 217 aa4.44□□□□□ -1.7
RTTN-201ENST00000255674 PHLPP1O60346 1717 aa4.44□□□□□ -1.7
RTTN-201ENST00000255674 COL1A2P08123 1366 aa4.44□□□□□ -1.7
RTTN-201ENST00000255674 SMARCA1P28370 1054 aa4.44□□□□□ -1.7
RTTN-201ENST00000255674 CCDC96Q2M329 555 aa4.44□□□□□ -1.7
RTTN-201ENST00000255674 CLEC4GQ6UXB4 293 aa4.44□□□□□ -1.7
RTTN-201ENST00000255674 WDHD1O75717 1129 aaPredicted RBP4.44□□□□□ -1.7
RTTN-201ENST00000255674 POU5F1Q01860 360 aaKnown RBP4.44□□□□□ -1.7
RTTN-201ENST00000255674 ZNF830Q96NB3 372 aaPredicted RBP4.44□□□□□ -1.7
RTTN-201ENST00000255674 STK26Q9P289 416 aa4.44□□□□□ -1.7
RTTN-201ENST00000255674 LOC102724159A0A0B4J2E5 919 aa4.44□□□□□ -1.7
RTTN-201ENST00000255674 IKQ13123 557 aaPredicted RBP4.44□□□□□ -1.7
RTTN-201ENST00000255674 PWP2Q15269 919 aaKnown RBP4.44□□□□□ -1.7
RTTN-201ENST00000255674 ERVV-1B6SEH8 477 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 TCEAL1Q15170 157 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 LINS1Q8NG48 757 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 COL4A6Q14031 1691 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 MSNP26038 577 aaKnown RBP4.43□□□□□ -1.7
RTTN-201ENST00000255674 CDC42EP4Q9H3Q1 356 aaKnown RBP4.43□□□□□ -1.7
RTTN-201ENST00000255674 MTMR7Q9Y216 660 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 ZNF646O15015 1829 aaPredicted RBP4.43□□□□□ -1.7
RTTN-201ENST00000255674 HSP90B1P14625 803 aaKnown RBP4.43□□□□□ -1.7
RTTN-201ENST00000255674 CYB5RLQ6IPT4 315 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 FOXP2O15409 715 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 SLC26A4O43511 780 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 SASH1O94885 1247 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 MCCP23508 829 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 AMOTQ4VCS5 1084 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 GIMAP6Q6P9H5 292 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 VPS37DQ86XT2 251 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 NEUROD6Q96NK8 337 aa4.43□□□□□ -1.7
RTTN-201ENST00000255674 LAMB4A4D0S4 1761 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms