RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
PDE6B-201ENST00000255622 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
PDE6B-201ENST00000255622 SOS1Q07889 1333 aaPredicted RBP13.63□□□□□ -0.23
PDE6B-201ENST00000255622 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
PDE6B-201ENST00000255622 GPT2Q8TD30 523 aa13.63□□□□□ -0.23
PDE6B-201ENST00000255622 XPCQ01831 940 aaPredicted RBP13.63□□□□□ -0.23
PDE6B-201ENST00000255622 ZSCAN23Q3MJ62 389 aa13.63□□□□□ -0.23
PDE6B-201ENST00000255622 AXDND1Q5T1B0 1012 aaPredicted RBP13.63□□□□□ -0.23
PDE6B-201ENST00000255622 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 NASPP49321 788 aaPredicted RBP13.62□□□□□ -0.23
PDE6B-201ENST00000255622 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
PDE6B-201ENST00000255622 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 SRCIN1Q9C0H9 1055 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 STAP2Q9UGK3 403 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 NSFL1CQ9UNZ2 370 aaKnown RBP13.62□□□□□ -0.23
PDE6B-201ENST00000255622 RGPD2P0DJD1 1756 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 PI4KAP2A4QPH2 592 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 PI4KAP1Q8N8J0 262 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 SSH3Q8TE77 659 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 CEMIPQ8WUJ3 1361 aa13.62□□□□□ -0.23
PDE6B-201ENST00000255622 OFD1O75665 1012 aa13.61□□□□□ -0.23
PDE6B-201ENST00000255622 FOXD4L6Q3SYB3 417 aaPredicted RBP13.61□□□□□ -0.23
PDE6B-201ENST00000255622 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
PDE6B-201ENST00000255622 FOXD4L3Q6VB84 417 aaPredicted RBP13.61□□□□□ -0.23
PDE6B-201ENST00000255622 BANK1Q8NDB2 785 aa13.61□□□□□ -0.23
PDE6B-201ENST00000255622 N4BP2Q86UW6 1770 aaPredicted RBP13.61□□□□□ -0.23
PDE6B-201ENST00000255622 IP6K1Q92551 441 aa13.61□□□□□ -0.23
PDE6B-201ENST00000255622 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
PDE6B-201ENST00000255622 CACNA1FO60840 1977 aa13.61□□□□□ -0.23
PDE6B-201ENST00000255622 TNNT3P45378 269 aaPredicted RBP13.6□□□□□ -0.23
PDE6B-201ENST00000255622 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
PDE6B-201ENST00000255622 RHPN1Q8TCX5 695 aa13.6□□□□□ -0.23
PDE6B-201ENST00000255622 NFAT5O94916 1531 aa13.6□□□□□ -0.23
PDE6B-201ENST00000255622 MCCP23508 829 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 PSME1Q06323 249 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 POLA2Q14181 598 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 BEND3Q5T5X7 828 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 PI4K2BQ8TCG2 481 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 PRAMEF22A3QJZ6 481 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
PDE6B-201ENST00000255622 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
PDE6B-201ENST00000255622 BABAM1Q9NWV8 329 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
PDE6B-201ENST00000255622 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
PDE6B-201ENST00000255622 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
PDE6B-201ENST00000255622 TEFQ10587 303 aa13.58□□□□□ -0.24
PDE6B-201ENST00000255622 RBSNQ9H1K0 784 aa13.58□□□□□ -0.24
PDE6B-201ENST00000255622 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.24
PDE6B-201ENST00000255622 PXDNQ92626 1479 aa13.58□□□□□ -0.24
PDE6B-201ENST00000255622 ADCY9O60503 1353 aa13.58□□□□□ -0.24
PDE6B-201ENST00000255622 DTNBO60941 627 aa13.58□□□□□ -0.24
PDE6B-201ENST00000255622 ZNF445P59923 1031 aa13.58□□□□□ -0.24
PDE6B-201ENST00000255622 MED1Q15648 1581 aaPredicted RBP13.57□□□□□ -0.24
PDE6B-201ENST00000255622 LMOD2Q6P5Q4 547 aa13.57□□□□□ -0.24
PDE6B-201ENST00000255622 CUL4AQ13619 759 aa13.57□□□□□ -0.24
PDE6B-201ENST00000255622 KDM3BQ7LBC6 1761 aa13.57□□□□□ -0.24
PDE6B-201ENST00000255622 ORAI2Q96SN7 254 aa13.56□□□□□ -0.24
PDE6B-201ENST00000255622 GDPD2Q9HCC8 539 aa13.56□□□□□ -0.24
PDE6B-201ENST00000255622 BRD1O95696 1058 aa13.56□□□□□ -0.24
PDE6B-201ENST00000255622 ANAPC15P60006 121 aa13.56□□□□□ -0.24
PDE6B-201ENST00000255622 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
PDE6B-201ENST00000255622 SPG7Q9UQ90 795 aa13.56□□□□□ -0.24
PDE6B-201ENST00000255622 SYCE3A1L190 88 aa13.56□□□□□ -0.24
PDE6B-201ENST00000255622 RAB11FIP3O75154 756 aa13.56□□□□□ -0.24
PDE6B-201ENST00000255622 KIF1BPQ96EK5 621 aa13.56□□□□□ -0.24
PDE6B-201ENST00000255622 HSPA4P34932 840 aa13.55□□□□□ -0.24
PDE6B-201ENST00000255622 CCDC173Q0VFZ6 552 aa13.55□□□□□ -0.24
PDE6B-201ENST00000255622 CWF19L2Q2TBE0 894 aaKnown RBP13.55□□□□□ -0.24
PDE6B-201ENST00000255622 PA2G4Q9UQ80 394 aaKnown RBP13.55□□□□□ -0.24
PDE6B-201ENST00000255622 AOX1Q06278 1338 aa13.55□□□□□ -0.24
PDE6B-201ENST00000255622 CPA1P15085 419 aa13.55□□□□□ -0.24
PDE6B-201ENST00000255622 MCM2P49736 904 aa13.55□□□□□ -0.24
PDE6B-201ENST00000255622 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
PDE6B-201ENST00000255622 MAP3K2Q9Y2U5 619 aa13.55□□□□□ -0.24
PDE6B-201ENST00000255622 TNNT1P13805 278 aa13.54□□□□□ -0.24
PDE6B-201ENST00000255622 AKAP4Q5JQC9 854 aa13.54□□□□□ -0.24
PDE6B-201ENST00000255622 PPP1R9BQ96SB3 815 aa13.54□□□□□ -0.24
PDE6B-201ENST00000255622 DYNC1I1O14576 645 aa13.54□□□□□ -0.24
PDE6B-201ENST00000255622 SGSM2O43147 1006 aa13.54□□□□□ -0.24
PDE6B-201ENST00000255622 CHD2O14647 1828 aaKnown RBP13.54□□□□□ -0.24
PDE6B-201ENST00000255622 PHF14O94880 888 aa13.54□□□□□ -0.24
PDE6B-201ENST00000255622 SNX14Q9Y5W7 946 aa13.54□□□□□ -0.24
PDE6B-201ENST00000255622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.54□□□□□ -0.24
PDE6B-201ENST00000255622 GCP02774 474 aa13.53□□□□□ -0.24
PDE6B-201ENST00000255622 AXIN2Q9Y2T1 843 aa13.53□□□□□ -0.24
PDE6B-201ENST00000255622 RAD50Q92878 1312 aa13.53□□□□□ -0.24
PDE6B-201ENST00000255622 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
PDE6B-201ENST00000255622 LSG1Q9H089 658 aaKnown RBP13.53□□□□□ -0.24
PDE6B-201ENST00000255622 LMO7Q8WWI1 1683 aa13.53□□□□□ -0.24
PDE6B-201ENST00000255622 CLSTN1O94985 981 aa13.52□□□□□ -0.24
PDE6B-201ENST00000255622 PLEKHO1Q53GL0 409 aaPredicted RBP13.52□□□□□ -0.24
PDE6B-201ENST00000255622 ANKLE2Q86XL3 938 aa13.52□□□□□ -0.24
PDE6B-201ENST00000255622 CNTROBQ8N137 903 aa13.52□□□□□ -0.24
PDE6B-201ENST00000255622 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.24
PDE6B-201ENST00000255622 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.24
PDE6B-201ENST00000255622 TSC1Q92574 1164 aa13.52□□□□□ -0.24
PDE6B-201ENST00000255622 INTS4Q96HW7 963 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms