RNA–Protein interactions for RNA: ENST00000254661.4

RAMP1-201, Transcript of receptor activity modifying protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAMP1, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP1-201ENST00000254661 GNAT3A8MTJ3 354 aa22.72■■□□□ 1.23
RAMP1-201ENST00000254661 U2SURPO15042 1029 aaKnown RBP22.72■■□□□ 1.23
RAMP1-201ENST00000254661 NPHP1O15259 732 aa22.72■■□□□ 1.23
RAMP1-201ENST00000254661 STYK1Q6J9G0 422 aa22.72■■□□□ 1.23
RAMP1-201ENST00000254661 CACNA1SQ13698 1873 aa22.71■■□□□ 1.23
RAMP1-201ENST00000254661 FOXN1O15353 648 aa22.71■■□□□ 1.23
RAMP1-201ENST00000254661 FMNL2Q96PY5 1086 aa22.71■■□□□ 1.23
RAMP1-201ENST00000254661 COL3A1P02461 1466 aaPredicted RBP22.71■■□□□ 1.23
RAMP1-201ENST00000254661 SIPA1L3O60292 1781 aaPredicted RBP22.71■■□□□ 1.23
RAMP1-201ENST00000254661 PRAMEF22A3QJZ6 481 aa22.7■■□□□ 1.22
RAMP1-201ENST00000254661 ST5P78524 1137 aa22.7■■□□□ 1.22
RAMP1-201ENST00000254661 DDX10Q13206 875 aaKnown RBP22.7■■□□□ 1.22
RAMP1-201ENST00000254661 DZIP3Q86Y13 1208 aaKnown RBP22.7■■□□□ 1.22
RAMP1-201ENST00000254661 C7orf43Q8WVR3 580 aa22.7■■□□□ 1.22
RAMP1-201ENST00000254661 MASTLQ96GX5 879 aa22.7■■□□□ 1.22
RAMP1-201ENST00000254661 USP16Q9Y5T5 823 aa22.7■■□□□ 1.22
RAMP1-201ENST00000254661 OLFM4Q6UX06 510 aa22.69■■□□□ 1.22
RAMP1-201ENST00000254661 GAS2L2Q8NHY3 880 aa22.69■■□□□ 1.22
RAMP1-201ENST00000254661 CNTNAP1P78357 1384 aa22.68■■□□□ 1.22
RAMP1-201ENST00000254661 PASKQ96RG2 1323 aa22.68■■□□□ 1.22
RAMP1-201ENST00000254661 TAF1DQ9H5J8 278 aaPredicted RBP22.68■■□□□ 1.22
RAMP1-201ENST00000254661 PHACTR3Q96KR7 559 aa22.67■■□□□ 1.22
RAMP1-201ENST00000254661 CEMIPQ8WUJ3 1361 aa22.66■■□□□ 1.22
RAMP1-201ENST00000254661 ZNF541Q9H0D2 1346 aa22.66■■□□□ 1.22
RAMP1-201ENST00000254661 BTBD11A6QL63 1104 aa22.66■■□□□ 1.22
RAMP1-201ENST00000254661 NPM2Q86SE8 214 aaKnown RBP22.66■■□□□ 1.22
RAMP1-201ENST00000254661 LDHDQ86WU2 507 aa22.66■■□□□ 1.22
RAMP1-201ENST00000254661 L3MBTL3Q96JM7 780 aaPredicted RBP22.66■■□□□ 1.22
RAMP1-201ENST00000254661 ZNF277Q9NRM2 450 aaPredicted RBP22.66■■□□□ 1.22
RAMP1-201ENST00000254661 BCORQ6W2J9 1755 aa22.66■■□□□ 1.22
RAMP1-201ENST00000254661 SOGA3Q5TF21 947 aa22.65■■□□□ 1.22
RAMP1-201ENST00000254661 NBPF5PQ86XG9 351 aaPredicted RBP22.65■■□□□ 1.22
RAMP1-201ENST00000254661 ARFGEF2Q9Y6D5 1785 aa22.64■■□□□ 1.22
RAMP1-201ENST00000254661 IQCA1LA6NCM1 817 aa22.64■■□□□ 1.21
RAMP1-201ENST00000254661 ITGBL1O95965 494 aaPredicted RBP22.64■■□□□ 1.21
RAMP1-201ENST00000254661 VEGFBP49765 207 aa22.64■■□□□ 1.21
RAMP1-201ENST00000254661 CCDC93Q567U6 631 aa22.64■■□□□ 1.21
RAMP1-201ENST00000254661 EAPPQ56P03 285 aaPredicted RBP22.64■■□□□ 1.21
RAMP1-201ENST00000254661 FAM177BA6PVY3 158 aa22.62■■□□□ 1.21
RAMP1-201ENST00000254661 NPR1P16066 1061 aa22.61■■□□□ 1.21
RAMP1-201ENST00000254661 PRKAR2BP31323 418 aa22.61■■□□□ 1.21
RAMP1-201ENST00000254661 FKBP4Q02790 459 aaKnown RBP eCLIP22.61■■□□□ 1.21
RAMP1-201ENST00000254661 KLRG2A4D1S0 409 aaPredicted RBP22.6■■□□□ 1.21
RAMP1-201ENST00000254661 TMEM88BA6NKF7 163 aa22.6■■□□□ 1.21
RAMP1-201ENST00000254661 CLEC11AQ9Y240 323 aa22.6■■□□□ 1.21
RAMP1-201ENST00000254661 SCN4AP35499 1836 aa22.59■■□□□ 1.21
RAMP1-201ENST00000254661 NBPF26B4DH59 902 aa22.59■■□□□ 1.21
RAMP1-201ENST00000254661 NBPF10Q6P3W6 841 aaKnown RBP22.59■■□□□ 1.21
RAMP1-201ENST00000254661 CLEC4GQ6UXB4 293 aa22.59■■□□□ 1.21
RAMP1-201ENST00000254661 MCM10Q7L590 875 aa22.59■■□□□ 1.21
RAMP1-201ENST00000254661 NBPF15Q8N660 670 aa22.59■■□□□ 1.21
RAMP1-201ENST00000254661 RSPH6AQ9H0K4 717 aa22.59■■□□□ 1.21
RAMP1-201ENST00000254661 PRDM10Q9NQV6 1147 aa22.59■■□□□ 1.21
RAMP1-201ENST00000254661 HACL1Q9UJ83 578 aa22.59■■□□□ 1.21
RAMP1-201ENST00000254661 NIP7Q9Y221 180 aaKnown RBP eCLIP22.59■■□□□ 1.21
RAMP1-201ENST00000254661 EPHX2P34913 555 aa22.58■■□□□ 1.21
RAMP1-201ENST00000254661 MAP1SQ66K74 1059 aaPredicted RBP22.58■■□□□ 1.21
RAMP1-201ENST00000254661 RNF123Q5XPI4 1314 aa22.57■■□□□ 1.2
RAMP1-201ENST00000254661 SNRPA1P09661 255 aaKnown RBP22.57■■□□□ 1.2
RAMP1-201ENST00000254661 CTCFP49711 727 aaPredicted RBP22.57■■□□□ 1.2
RAMP1-201ENST00000254661 HLFQ16534 295 aa22.57■■□□□ 1.2
RAMP1-201ENST00000254661 AIDAQ96BJ3 306 aa22.57■■□□□ 1.2
RAMP1-201ENST00000254661 WBP1LQ9NX94 342 aa22.57■■□□□ 1.2
RAMP1-201ENST00000254661 ZNF652Q9Y2D9 606 aa22.57■■□□□ 1.2
RAMP1-201ENST00000254661 LBX1P52954 281 aa22.56■■□□□ 1.2
RAMP1-201ENST00000254661 DCTN1Q14203 1278 aa22.56■■□□□ 1.2
RAMP1-201ENST00000254661 TPTE2Q6XPS3 522 aa22.56■■□□□ 1.2
RAMP1-201ENST00000254661 SYNE4Q8N205 404 aa22.56■■□□□ 1.2
RAMP1-201ENST00000254661 ADAMTSL1Q8N6G6 1762 aa22.55■■□□□ 1.2
RAMP1-201ENST00000254661 IARSP41252 1262 aaKnown RBP22.55■■□□□ 1.2
RAMP1-201ENST00000254661 CNTROBQ8N137 903 aa22.55■■□□□ 1.2
RAMP1-201ENST00000254661 NPC1L1Q9UHC9 1359 aa22.54■■□□□ 1.2
RAMP1-201ENST00000254661 FZD9O00144 591 aa22.54■■□□□ 1.2
RAMP1-201ENST00000254661 RTKN2Q8IZC4 609 aa22.54■■□□□ 1.2
RAMP1-201ENST00000254661 SLC51AQ86UW1 340 aa22.53■■□□□ 1.2
RAMP1-201ENST00000254661 FMR1Q06787 632 aaKnown RBP eCLIP22.52■■□□□ 1.2
RAMP1-201ENST00000254661 SNED1Q8TER0 1413 aa22.51■■□□□ 1.19
RAMP1-201ENST00000254661 RASSF10A6NK89 507 aa22.51■■□□□ 1.19
RAMP1-201ENST00000254661 DEFB115Q30KQ5 88 aa22.51■■□□□ 1.19
RAMP1-201ENST00000254661 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
RAMP1-201ENST00000254661 COL4A5P29400 1685 aa22.51■■□□□ 1.19
RAMP1-201ENST00000254661 ABCC12Q96J65 1359 aa22.5■■□□□ 1.19
RAMP1-201ENST00000254661 HSPA8P11142 646 aaKnown RBP22.5■■□□□ 1.19
RAMP1-201ENST00000254661 PNMA8AQ86V59 439 aaPredicted RBP22.5■■□□□ 1.19
RAMP1-201ENST00000254661 NUTM1Q86Y26 1132 aa22.5■■□□□ 1.19
RAMP1-201ENST00000254661 RTF1Q92541 710 aaKnown RBP22.5■■□□□ 1.19
RAMP1-201ENST00000254661 MIS18AQ9NYP9 233 aa22.5■■□□□ 1.19
RAMP1-201ENST00000254661 U2AF1L5P0DN76 240 aaPredicted RBP22.49■■□□□ 1.19
RAMP1-201ENST00000254661 GTF2E1P29083 439 aaPredicted RBP22.49■■□□□ 1.19
RAMP1-201ENST00000254661 ALDH1B1P30837 517 aa22.49■■□□□ 1.19
RAMP1-201ENST00000254661 U2AF1Q01081 240 aaKnown RBP eCLIP22.49■■□□□ 1.19
RAMP1-201ENST00000254661 GPC2Q8N158 579 aa22.49■■□□□ 1.19
RAMP1-201ENST00000254661 NGEFQ8N5V2 710 aa22.49■■□□□ 1.19
RAMP1-201ENST00000254661 ABT1Q9ULW3 272 aaKnown RBP22.49■■□□□ 1.19
RAMP1-201ENST00000254661 GJA3Q9Y6H8 435 aa22.49■■□□□ 1.19
RAMP1-201ENST00000254661 WDR33Q9C0J8 1336 aaKnown RBP22.49■■□□□ 1.19
RAMP1-201ENST00000254661 CRY2Q49AN0 593 aa22.47■■□□□ 1.19
RAMP1-201ENST00000254661 CFAP53Q96M91 514 aa22.47■■□□□ 1.19
RAMP1-201ENST00000254661 LTBP1Q14766 1721 aa22.47■■□□□ 1.19
RAMP1-201ENST00000254661 RGL2O15211 777 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms