RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 CCDC24Q8N4L8 307 aa23.31■■□□□ 1.32
SNRPA1-201ENST00000254193 C8orf58Q8NAV2 365 aa23.31■■□□□ 1.32
SNRPA1-201ENST00000254193 ZBTB3Q9H5J0 574 aa23.31■■□□□ 1.32
SNRPA1-201ENST00000254193 CHPF2Q9P2E5 772 aa23.31■■□□□ 1.32
SNRPA1-201ENST00000254193 MAP3K15Q6ZN16 1313 aa23.31■■□□□ 1.32
SNRPA1-201ENST00000254193 ERVV-1B6SEH8 477 aa23.3■■□□□ 1.32
SNRPA1-201ENST00000254193 RGL2O15211 777 aa23.3■■□□□ 1.32
SNRPA1-201ENST00000254193 CHRNA5P30532 468 aa23.3■■□□□ 1.32
SNRPA1-201ENST00000254193 DIEXFQ68CQ4 756 aaKnown RBP23.3■■□□□ 1.32
SNRPA1-201ENST00000254193 DDX21Q9NR30 783 aaKnown RBP eCLIP23.3■■□□□ 1.32
SNRPA1-201ENST00000254193 NIP7Q9Y221 180 aaKnown RBP eCLIP23.3■■□□□ 1.32
SNRPA1-201ENST00000254193 LAMB4A4D0S4 1761 aa23.29■■□□□ 1.32
SNRPA1-201ENST00000254193 CCER2I3L3R5 266 aa23.29■■□□□ 1.32
SNRPA1-201ENST00000254193 KCNA3P22001 575 aa23.29■■□□□ 1.32
SNRPA1-201ENST00000254193 PRR5LQ6MZQ0 368 aa23.29■■□□□ 1.32
SNRPA1-201ENST00000254193 IL16Q14005 1332 aa23.29■■□□□ 1.32
SNRPA1-201ENST00000254193 GRIN3BO60391 1043 aa23.28■■□□□ 1.32
SNRPA1-201ENST00000254193 AIMP1Q12904 312 aaKnown RBP23.28■■□□□ 1.32
SNRPA1-201ENST00000254193 COPS6Q7L5N1 327 aa23.28■■□□□ 1.32
SNRPA1-201ENST00000254193 XAGE3Q8WTP9 111 aa23.28■■□□□ 1.32
SNRPA1-201ENST00000254193 SCN7AQ01118 1682 aa23.28■■□□□ 1.32
SNRPA1-201ENST00000254193 NPHP1O15259 732 aa23.27■■□□□ 1.32
SNRPA1-201ENST00000254193 NBPF5PQ86XG9 351 aaPredicted RBP23.27■■□□□ 1.32
SNRPA1-201ENST00000254193 WDR63Q8IWG1 891 aa23.27■■□□□ 1.32
SNRPA1-201ENST00000254193 TSPYL6Q8N831 410 aa23.27■■□□□ 1.32
SNRPA1-201ENST00000254193 CNBD1Q8NA66 436 aa23.27■■□□□ 1.32
SNRPA1-201ENST00000254193 FAM177BA6PVY3 158 aa23.26■■□□□ 1.31
SNRPA1-201ENST00000254193 DBF4Q9UBU7 674 aaPredicted RBP23.26■■□□□ 1.31
SNRPA1-201ENST00000254193 BCS1LQ9Y276 419 aa23.26■■□□□ 1.31
SNRPA1-201ENST00000254193 YY1P25490 414 aa23.25■■□□□ 1.31
SNRPA1-201ENST00000254193 PIM2Q9P1W9 311 aa23.25■■□□□ 1.31
SNRPA1-201ENST00000254193 GPTP24298 496 aa23.24■■□□□ 1.31
SNRPA1-201ENST00000254193 C2CD5Q86YS7 1000 aa23.24■■□□□ 1.31
SNRPA1-201ENST00000254193 BRIP1Q9BX63 1249 aa23.24■■□□□ 1.31
SNRPA1-201ENST00000254193 GIGYF2Q6Y7W6 1299 aaKnown RBP23.23■■□□□ 1.31
SNRPA1-201ENST00000254193 MIER1Q8N108 512 aa23.23■■□□□ 1.31
SNRPA1-201ENST00000254193 SPINK5Q9NQ38 1064 aaPredicted RBP23.23■■□□□ 1.31
SNRPA1-201ENST00000254193 ST5P78524 1137 aa23.22■■□□□ 1.31
SNRPA1-201ENST00000254193 TPTE2Q6XPS3 522 aa23.22■■□□□ 1.31
SNRPA1-201ENST00000254193 FANCIQ9NVI1 1328 aa23.22■■□□□ 1.31
SNRPA1-201ENST00000254193 H0YIN7 160 aa23.21■■□□□ 1.31
SNRPA1-201ENST00000254193 DALRD3Q5D0E6 543 aaKnown RBP23.21■■□□□ 1.31
SNRPA1-201ENST00000254193 ZNF34Q8IZ26 560 aa23.21■■□□□ 1.31
SNRPA1-201ENST00000254193 HYPKQ9NX55 129 aa23.21■■□□□ 1.31
SNRPA1-201ENST00000254193 ATP10DQ9P241 1426 aa23.21■■□□□ 1.31
SNRPA1-201ENST00000254193 KIF13BQ9NQT8 1826 aa23.2■■□□□ 1.3
SNRPA1-201ENST00000254193 BCORQ6W2J9 1755 aa23.2■■□□□ 1.3
SNRPA1-201ENST00000254193 UBN2Q6ZU65 1347 aa23.2■■□□□ 1.3
SNRPA1-201ENST00000254193 PDE6BP35913 854 aa23.2■■□□□ 1.3
SNRPA1-201ENST00000254193 NRXN2Q9P2S2 1712 aa23.19■■□□□ 1.3
SNRPA1-201ENST00000254193 GTF2E1P29083 439 aaPredicted RBP23.19■■□□□ 1.3
SNRPA1-201ENST00000254193 TWISTNBQ3B726 338 aaPredicted RBP23.19■■□□□ 1.3
SNRPA1-201ENST00000254193 SUSD4Q5VX71 490 aa23.19■■□□□ 1.3
SNRPA1-201ENST00000254193 KIAA1551Q9HCM1 1747 aa23.19■■□□□ 1.3
SNRPA1-201ENST00000254193 TCERG1O14776 1098 aaKnown RBP23.18■■□□□ 1.3
SNRPA1-201ENST00000254193 CCDC30Q5VVM6 783 aa23.18■■□□□ 1.3
SNRPA1-201ENST00000254193 NUTM1Q86Y26 1132 aa23.18■■□□□ 1.3
SNRPA1-201ENST00000254193 PHAXQ9H814 394 aaKnown RBP23.18■■□□□ 1.3
SNRPA1-201ENST00000254193 ZNF521Q96K83 1311 aa23.17■■□□□ 1.3
SNRPA1-201ENST00000254193 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
SNRPA1-201ENST00000254193 ANKRD13DQ6ZTN6 518 aa23.17■■□□□ 1.3
SNRPA1-201ENST00000254193 PLBD2Q8NHP8 589 aa23.17■■□□□ 1.3
SNRPA1-201ENST00000254193 EXOSC9Q06265 439 aaKnown RBP23.16■■□□□ 1.3
SNRPA1-201ENST00000254193 ZNF622Q969S3 477 aaKnown RBP eCLIP23.16■■□□□ 1.31e-7■□□□□ 10.2
SNRPA1-201ENST00000254193 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
SNRPA1-201ENST00000254193 NYXQ9GZU5 481 aa23.16■■□□□ 1.3
SNRPA1-201ENST00000254193 MYH16Q9H6N6 1097 aa23.16■■□□□ 1.3
SNRPA1-201ENST00000254193 PDZRN3Q9UPQ7 1066 aa23.16■■□□□ 1.3
SNRPA1-201ENST00000254193 AFDNP55196 1824 aaKnown RBP23.16■■□□□ 1.3
SNRPA1-201ENST00000254193 N4BP2Q86UW6 1770 aaPredicted RBP23.16■■□□□ 1.3
SNRPA1-201ENST00000254193 TCIRG1Q13488 830 aa23.15■■□□□ 1.3
SNRPA1-201ENST00000254193 ERFEQ4G0M1 354 aa23.15■■□□□ 1.3
SNRPA1-201ENST00000254193 PARP10Q53GL7 1025 aa23.15■■□□□ 1.3
SNRPA1-201ENST00000254193 HSP90AB3PQ58FF7 597 aa23.15■■□□□ 1.3
SNRPA1-201ENST00000254193 ARHGAP27Q6ZUM4 889 aa23.15■■□□□ 1.3
SNRPA1-201ENST00000254193 TTLL6Q8N841 843 aa23.15■■□□□ 1.3
SNRPA1-201ENST00000254193 UTRNP46939 3433 aa23.15■■□□□ 1.3
SNRPA1-201ENST00000254193 GOLGB1Q14789 3259 aaKnown RBP23.14■■□□□ 1.29
SNRPA1-201ENST00000254193 NTSR2O95665 410 aa23.13■■□□□ 1.29
SNRPA1-201ENST00000254193 SRGNP10124 158 aa23.13■■□□□ 1.29
SNRPA1-201ENST00000254193 PPP1R42Q7Z4L9 355 aa23.13■■□□□ 1.29
SNRPA1-201ENST00000254193 ZNF428Q96B54 188 aa23.13■■□□□ 1.29
SNRPA1-201ENST00000254193 ABCC12Q96J65 1359 aa23.13■■□□□ 1.29
SNRPA1-201ENST00000254193 KLRG2A4D1S0 409 aaPredicted RBP23.12■■□□□ 1.29
SNRPA1-201ENST00000254193 VAMP4O75379 141 aa23.12■■□□□ 1.29
SNRPA1-201ENST00000254193 RIC3Q7Z5B4 369 aa23.12■■□□□ 1.29
SNRPA1-201ENST00000254193 NLRP10Q86W26 655 aa23.12■■□□□ 1.29
SNRPA1-201ENST00000254193 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
SNRPA1-201ENST00000254193 STK31Q9BXU1 1019 aa23.12■■□□□ 1.29
SNRPA1-201ENST00000254193 ATP5J2-PTCD1G3V325 749 aa23.11■■□□□ 1.29
SNRPA1-201ENST00000254193 STYK1Q6J9G0 422 aa23.11■■□□□ 1.29
SNRPA1-201ENST00000254193 MASTLQ96GX5 879 aa23.11■■□□□ 1.29
SNRPA1-201ENST00000254193 IBTKQ9P2D0 1353 aaPredicted RBP23.11■■□□□ 1.29
SNRPA1-201ENST00000254193 SLC4A2P04920 1241 aa23.09■■□□□ 1.29
SNRPA1-201ENST00000254193 CNKSR1Q969H4 720 aa23.09■■□□□ 1.29
SNRPA1-201ENST00000254193 ISCA1Q9BUE6 129 aa23.09■■□□□ 1.29
SNRPA1-201ENST00000254193 ZNF219Q9P2Y4 722 aaPredicted RBP23.09■■□□□ 1.29
SNRPA1-201ENST00000254193 NPR1P16066 1061 aa23.08■■□□□ 1.29
SNRPA1-201ENST00000254193 G2E3Q7L622 706 aa23.08■■□□□ 1.29
SNRPA1-201ENST00000254193 SYNE4Q8N205 404 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms