RNA–Protein interactions for RNA: ENST00000251241.8

DHX40-201, Transcript of DEAH-box helicase 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHX40, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-201ENST00000251241 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
DHX40-201ENST00000251241 GEMIN8Q9NWZ8 242 aaKnown RBP11.55□□□□□ -0.56
DHX40-201ENST00000251241 F6X3S4 739 aa11.55□□□□□ -0.56
DHX40-201ENST00000251241 PHF14O94880 888 aa11.55□□□□□ -0.56
DHX40-201ENST00000251241 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
DHX40-201ENST00000251241 ARHGEF25Q86VW2 580 aa11.55□□□□□ -0.56
DHX40-201ENST00000251241 PSMD1Q99460 953 aa11.55□□□□□ -0.56
DHX40-201ENST00000251241 CDK12Q9NYV4 1490 aaPredicted RBP11.54□□□□□ -0.56
DHX40-201ENST00000251241 FLT4P35916 1363 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 KIAA0232Q92628 1395 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 ANKRD26Q9UPS8 1709 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 ZBTB7BO15156 539 aaPredicted RBP11.54□□□□□ -0.56
DHX40-201ENST00000251241 EIF2S2P20042 333 aaKnown RBP11.54□□□□□ -0.56
DHX40-201ENST00000251241 HSPA1LP34931 641 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 FKBP5Q13451 457 aaPredicted RBP11.54□□□□□ -0.56
DHX40-201ENST00000251241 GAS2L2Q8NHY3 880 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 CWC22Q9HCG8 908 aaKnown RBP11.54□□□□□ -0.56
DHX40-201ENST00000251241 ZKSCAN5Q9Y2L8 839 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 SMC5Q8IY18 1101 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 MYRIPQ8NFW9 859 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 NEK11Q8NG66 645 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 IP6K1Q92551 441 aa11.54□□□□□ -0.56
DHX40-201ENST00000251241 USP19O94966 1318 aa11.53□□□□□ -0.56
DHX40-201ENST00000251241 DHX16O60231 1041 aaKnown RBP11.53□□□□□ -0.56
DHX40-201ENST00000251241 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
DHX40-201ENST00000251241 EVA1CP58658 441 aa11.53□□□□□ -0.56
DHX40-201ENST00000251241 RASSF4Q9H2L5 321 aa11.53□□□□□ -0.56
DHX40-201ENST00000251241 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
DHX40-201ENST00000251241 RBM27Q9P2N5 1060 aaKnown RBP11.53□□□□□ -0.56
DHX40-201ENST00000251241 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
DHX40-201ENST00000251241 CCDC172P0C7W6 258 aa11.53□□□□□ -0.56
DHX40-201ENST00000251241 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
DHX40-201ENST00000251241 GOLGA6L6A8MZA4 724 aa11.53□□□□□ -0.56
DHX40-201ENST00000251241 GOLGA6L22H0YM25 854 aa11.52□□□□□ -0.56
DHX40-201ENST00000251241 ZNF853P0CG23 659 aa11.52□□□□□ -0.56
DHX40-201ENST00000251241 ANKRD24Q8TF21 1146 aa11.52□□□□□ -0.56
DHX40-201ENST00000251241 SRRTQ9BXP5 876 aaKnown RBP11.52□□□□□ -0.56
DHX40-201ENST00000251241 PRDM16Q9HAZ2 1276 aa11.52□□□□□ -0.56
DHX40-201ENST00000251241 TRPM3Q9HCF6 1732 aaPredicted RBP11.52□□□□□ -0.57
DHX40-201ENST00000251241 RAD51AP2Q09MP3 1159 aa11.52□□□□□ -0.57
DHX40-201ENST00000251241 ARHGAP45Q92619 1136 aa11.52□□□□□ -0.57
DHX40-201ENST00000251241 GCC1Q96CN9 775 aa11.52□□□□□ -0.57
DHX40-201ENST00000251241 NOL7Q9UMY1 257 aaKnown RBP11.52□□□□□ -0.57
DHX40-201ENST00000251241 NUCB1Q02818 461 aa11.51□□□□□ -0.57
DHX40-201ENST00000251241 GBP4Q96PP9 640 aa11.51□□□□□ -0.57
DHX40-201ENST00000251241 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
DHX40-201ENST00000251241 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
DHX40-201ENST00000251241 MCTP1Q6DN14 999 aa11.51□□□□□ -0.57
DHX40-201ENST00000251241 TNPO1Q92973 898 aaKnown RBP11.51□□□□□ -0.57
DHX40-201ENST00000251241 SGSM3Q96HU1 749 aa11.51□□□□□ -0.57
DHX40-201ENST00000251241 TBC1D32Q96NH3 1257 aa11.51□□□□□ -0.57
DHX40-201ENST00000251241 ARMC3Q5W041 872 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 CHL1O00533 1208 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 SMARCA5O60264 1052 aaPredicted RBP11.5□□□□□ -0.57
DHX40-201ENST00000251241 PHLPP1O60346 1717 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 TERF1P54274 439 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 MEX3CQ5U5Q3 659 aaKnown RBP11.5□□□□□ -0.57
DHX40-201ENST00000251241 GTF3C6Q969F1 213 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 MEIS3Q99687 375 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 RBSNQ9H1K0 784 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 KAT6BQ8WYB5 2073 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 MAP2K1Q02750 393 aaPredicted RBP11.5□□□□□ -0.57
DHX40-201ENST00000251241 TTC19Q6DKK2 380 aaPredicted RBP11.5□□□□□ -0.57
DHX40-201ENST00000251241 G2E3Q7L622 706 aa11.5□□□□□ -0.57
DHX40-201ENST00000251241 MED1Q15648 1581 aaPredicted RBP11.5□□□□□ -0.57
DHX40-201ENST00000251241 SLFN14P0C7P3 912 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 LRCH2Q5VUJ6 765 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 TOM1L2Q6ZVM7 507 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 DEF6Q9H4E7 631 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 SUFUQ9UMX1 484 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
DHX40-201ENST00000251241 ARMCX6Q7L4S7 300 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 NCAPGQ9BPX3 1015 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 BTG4Q9NY30 223 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 RBM5P52756 815 aaKnown RBP eCLIP11.49□□□□□ -0.57
DHX40-201ENST00000251241 TEFQ10587 303 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 NBPF6Q5VWK0 638 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 NBPF4Q96M43 638 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 C8orf37Q96NL8 207 aa11.49□□□□□ -0.57
DHX40-201ENST00000251241 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.49□□□□□ -0.57
DHX40-201ENST00000251241 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
DHX40-201ENST00000251241 ICE2Q659A1 982 aa11.48□□□□□ -0.57
DHX40-201ENST00000251241 HMMRO75330 724 aa11.48□□□□□ -0.57
DHX40-201ENST00000251241 C16orf71Q8IYS4 520 aaPredicted RBP11.48□□□□□ -0.57
DHX40-201ENST00000251241 NGLY1Q96IV0 654 aa11.48□□□□□ -0.57
DHX40-201ENST00000251241 PRIM1P49642 420 aaKnown RBP11.48□□□□□ -0.57
DHX40-201ENST00000251241 SPC24Q8NBT2 197 aa11.48□□□□□ -0.57
DHX40-201ENST00000251241 CHAMP1Q96JM3 812 aa11.48□□□□□ -0.57
DHX40-201ENST00000251241 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
DHX40-201ENST00000251241 CLSTN1O94985 981 aa11.47□□□□□ -0.57
DHX40-201ENST00000251241 SATB1Q01826 763 aa11.47□□□□□ -0.57
DHX40-201ENST00000251241 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
DHX40-201ENST00000251241 ABCC4O15439 1325 aa11.47□□□□□ -0.57
DHX40-201ENST00000251241 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
DHX40-201ENST00000251241 PICK1Q9NRD5 415 aa11.47□□□□□ -0.57
DHX40-201ENST00000251241 OGFRQ9NZT2 677 aa11.47□□□□□ -0.57
DHX40-201ENST00000251241 CCDC39Q9UFE4 941 aa11.47□□□□□ -0.57
DHX40-201ENST00000251241 NFAT5O94916 1531 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms