RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 ST18O60284 1047 aa30.75■■■□□ 2.51
TMEM55B-201ENST00000250489 BICC1Q9H694 974 aaKnown RBP30.75■■■□□ 2.51
TMEM55B-201ENST00000250489 ERC1Q8IUD2 1116 aa30.75■■■□□ 2.51
TMEM55B-201ENST00000250489 PA2G4Q9UQ80 394 aaKnown RBP30.75■■■□□ 2.51
TMEM55B-201ENST00000250489 AK9Q5TCS8 1911 aa30.75■■■□□ 2.51
TMEM55B-201ENST00000250489 TNPO1Q92973 898 aaKnown RBP30.74■■■□□ 2.51
TMEM55B-201ENST00000250489 TTC41PQ6P2S7 1318 aa30.74■■■□□ 2.51
TMEM55B-201ENST00000250489 GCKRQ14397 625 aa30.73■■■□□ 2.51
TMEM55B-201ENST00000250489 ANKRD13DQ6ZTN6 518 aa30.73■■■□□ 2.51
TMEM55B-201ENST00000250489 CLASRPQ8N2M8 674 aaKnown RBP30.73■■■□□ 2.51
TMEM55B-201ENST00000250489 MYD88Q99836 296 aa30.73■■■□□ 2.51
TMEM55B-201ENST00000250489 ANO2Q9NQ90 1003 aa30.73■■■□□ 2.51
TMEM55B-201ENST00000250489 MAP4K4O95819 1239 aaPredicted RBP30.72■■■□□ 2.51
TMEM55B-201ENST00000250489 MCCP23508 829 aa30.72■■■□□ 2.51
TMEM55B-201ENST00000250489 CARD10Q9BWT7 1032 aa30.72■■■□□ 2.51
TMEM55B-201ENST00000250489 NHSL1Q5SYE7 1610 aa30.72■■■□□ 2.51
TMEM55B-201ENST00000250489 PIP4K2AP48426 406 aaPredicted RBP30.7■■■□□ 2.51
TMEM55B-201ENST00000250489 CNTROBQ8N137 903 aa30.7■■■□□ 2.51
TMEM55B-201ENST00000250489 DDX11L8A8MPP1 907 aa30.7■■■□□ 2.5
TMEM55B-201ENST00000250489 EPB41L2O43491 1005 aaKnown RBP30.7■■■□□ 2.5
TMEM55B-201ENST00000250489 GLRX3O76003 335 aaKnown RBP30.69■■■□□ 2.5
TMEM55B-201ENST00000250489 IL2RBP14784 551 aa30.69■■■□□ 2.5
TMEM55B-201ENST00000250489 ANAPC15P60006 121 aa30.69■■■□□ 2.5
TMEM55B-201ENST00000250489 ERVV-2B6SEH9 535 aa30.68■■■□□ 2.5
TMEM55B-201ENST00000250489 NKX1-1Q15270 411 aaPredicted RBP30.68■■■□□ 2.5
TMEM55B-201ENST00000250489 IL25Q9H293 177 aa30.68■■■□□ 2.5
TMEM55B-201ENST00000250489 UBR2Q8IWV8 1755 aa30.68■■■□□ 2.5
TMEM55B-201ENST00000250489 ARFGEF2Q9Y6D5 1785 aa30.68■■■□□ 2.5
TMEM55B-201ENST00000250489 IL17RAQ96F46 866 aa30.68■■■□□ 2.5
TMEM55B-201ENST00000250489 SHANK3Q9BYB0 1731 aa30.68■■■□□ 2.5
TMEM55B-201ENST00000250489 PALD1Q9ULE6 856 aa30.67■■■□□ 2.5
TMEM55B-201ENST00000250489 PAPPAQ13219 1627 aa30.67■■■□□ 2.5
TMEM55B-201ENST00000250489 ECHDC1Q9NTX5 307 aa30.66■■■□□ 2.5
TMEM55B-201ENST00000250489 GBP4Q96PP9 640 aa30.66■■■□□ 2.5
TMEM55B-201ENST00000250489 ERBB4Q15303 1308 aa30.66■■■□□ 2.5
TMEM55B-201ENST00000250489 SASH1O94885 1247 aa30.65■■■□□ 2.5
TMEM55B-201ENST00000250489 IFIT2P09913 472 aaKnown RBP30.65■■■□□ 2.5
TMEM55B-201ENST00000250489 G3BP1Q13283 466 aaKnown RBP eCLIP30.65■■■□□ 2.5
TMEM55B-201ENST00000250489 AFDNP55196 1824 aaKnown RBP30.65■■■□□ 2.5
TMEM55B-201ENST00000250489 GPATCH3Q96I76 525 aa30.65■■■□□ 2.5
TMEM55B-201ENST00000250489 KCPQ6ZWJ8 1503 aa30.64■■■□□ 2.5
TMEM55B-201ENST00000250489 SGSM2O43147 1006 aa30.64■■■□□ 2.5
TMEM55B-201ENST00000250489 EPHA10Q5JZY3 1008 aa30.64■■■□□ 2.5
TMEM55B-201ENST00000250489 STRN4Q9NRL3 753 aa30.64■■■□□ 2.5
TMEM55B-201ENST00000250489 TRAK2O60296 914 aa30.63■■■□□ 2.49
TMEM55B-201ENST00000250489 AACSQ86V21 672 aa30.63■■■□□ 2.49
TMEM55B-201ENST00000250489 NEK4P51957 841 aa30.63■■■□□ 2.49
TMEM55B-201ENST00000250489 PLBD2Q8NHP8 589 aa30.63■■■□□ 2.49
TMEM55B-201ENST00000250489 SSFA2P28290 1259 aa30.62■■■□□ 2.49
TMEM55B-201ENST00000250489 COL15A1P39059 1388 aa30.61■■■□□ 2.49
TMEM55B-201ENST00000250489 NBPF26B4DH59 902 aa30.61■■■□□ 2.49
TMEM55B-201ENST00000250489 NBPF14Q5TI25 921 aa30.61■■■□□ 2.49
TMEM55B-201ENST00000250489 NBPF10Q6P3W6 841 aaKnown RBP30.61■■■□□ 2.49
TMEM55B-201ENST00000250489 NBPF15Q8N660 670 aa30.61■■■□□ 2.49
TMEM55B-201ENST00000250489 EVA1CP58658 441 aa30.61■■■□□ 2.49
TMEM55B-201ENST00000250489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.61■■■□□ 2.49
TMEM55B-201ENST00000250489 HSPA4P34932 840 aa30.6■■■□□ 2.49
TMEM55B-201ENST00000250489 DDX54Q8TDD1 881 aaKnown RBP30.59■■■□□ 2.49
TMEM55B-201ENST00000250489 EAF2Q96CJ1 260 aaPredicted RBP30.59■■■□□ 2.49
TMEM55B-201ENST00000250489 CWC22Q9HCG8 908 aaKnown RBP30.59■■■□□ 2.49
TMEM55B-201ENST00000250489 RAD50Q92878 1312 aa30.59■■■□□ 2.49
TMEM55B-201ENST00000250489 MCM2P49736 904 aa30.59■■■□□ 2.49
TMEM55B-201ENST00000250489 CLEC17AQ6ZS10 378 aa30.58■■■□□ 2.49
TMEM55B-201ENST00000250489 SIL1Q9H173 461 aa30.58■■■□□ 2.49
TMEM55B-201ENST00000250489 TNS2Q63HR2 1409 aa30.58■■■□□ 2.49
TMEM55B-201ENST00000250489 KLHDC4Q8TBB5 520 aa30.57■■■□□ 2.48
TMEM55B-201ENST00000250489 ATP5J2-PTCD1G3V325 749 aa30.57■■■□□ 2.48
TMEM55B-201ENST00000250489 PTCD1O75127 700 aaKnown RBP30.57■■■□□ 2.48
TMEM55B-201ENST00000250489 NUCB2P80303 420 aa30.57■■■□□ 2.48
TMEM55B-201ENST00000250489 LSG1Q9H089 658 aaKnown RBP30.57■■■□□ 2.48
TMEM55B-201ENST00000250489 RABL6Q3YEC7 729 aaPredicted RBP30.56■■■□□ 2.48
TMEM55B-201ENST00000250489 UBE3BQ7Z3V4 1068 aa30.56■■■□□ 2.48
TMEM55B-201ENST00000250489 JARID2Q92833 1246 aaPredicted RBP30.56■■■□□ 2.48
TMEM55B-201ENST00000250489 COPRSQ9NQ92 184 aa30.56■■■□□ 2.48
TMEM55B-201ENST00000250489 CYP2E1P05181 493 aaPredicted RBP30.55■■■□□ 2.48
TMEM55B-201ENST00000250489 ZGPATQ8N5A5 531 aaKnown RBP30.55■■■□□ 2.48
TMEM55B-201ENST00000250489 TOGARAM1Q9Y4F4 1720 aa30.55■■■□□ 2.48
TMEM55B-201ENST00000250489 RFX5P48382 616 aaPredicted RBP30.55■■■□□ 2.48
TMEM55B-201ENST00000250489 CASP7P55210 303 aa30.55■■■□□ 2.48
TMEM55B-201ENST00000250489 CWC27Q6UX04 472 aaKnown RBP30.55■■■□□ 2.48
TMEM55B-201ENST00000250489 NUP188Q5SRE5 1749 aa30.55■■■□□ 2.48
TMEM55B-201ENST00000250489 A0A087WZG4 1122 aa30.54■■■□□ 2.48
TMEM55B-201ENST00000250489 EVI5LQ96CN4 794 aa30.54■■■□□ 2.48
TMEM55B-201ENST00000250489 TMX3Q96JJ7 454 aa30.54■■■□□ 2.48
TMEM55B-201ENST00000250489 CCDC8Q9H0W5 538 aaPredicted RBP30.54■■■□□ 2.48
TMEM55B-201ENST00000250489 DIAPH3Q9NSV4 1193 aa30.54■■■□□ 2.48
TMEM55B-201ENST00000250489 PTMSP20962 102 aa30.54■■■□□ 2.48
TMEM55B-201ENST00000250489 RUFY2Q8WXA3 655 aa30.52■■■□□ 2.48
TMEM55B-201ENST00000250489 TLR7Q9NYK1 1049 aaKnown RBP30.52■■■□□ 2.48
TMEM55B-201ENST00000250489 A1BGP04217 495 aa30.52■■■□□ 2.48
TMEM55B-201ENST00000250489 TTLL7Q6ZT98 887 aa30.52■■■□□ 2.48
TMEM55B-201ENST00000250489 PTPN12Q05209 780 aaKnown RBP30.51■■■□□ 2.47
TMEM55B-201ENST00000250489 KIAA1211Q6ZU35 1233 aa30.51■■■□□ 2.47
TMEM55B-201ENST00000250489 IL27Q8NEV9 243 aa30.51■■■□□ 2.47
TMEM55B-201ENST00000250489 GZF1Q9H116 711 aaPredicted RBP30.5■■■□□ 2.47
TMEM55B-201ENST00000250489 BAG4O95429 457 aaKnown RBP30.5■■■□□ 2.47
TMEM55B-201ENST00000250489 CUL4AQ13619 759 aa30.5■■■□□ 2.47
TMEM55B-201ENST00000250489 UPF3BQ9BZI7 483 aaKnown RBP30.49■■■□□ 2.47
TMEM55B-201ENST00000250489 H7C1W4 665 aa30.48■■■□□ 2.47
TMEM55B-201ENST00000250489 SNX14Q9Y5W7 946 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms