RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SPATA31A3Q5VYP0 1347 aa19.16■□□□□ 0.66
LRFN1-201ENST00000248668 IFIT2P09913 472 aaKnown RBP19.16■□□□□ 0.66
LRFN1-201ENST00000248668 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
LRFN1-201ENST00000248668 BRINP3Q76B58 766 aa19.16■□□□□ 0.66
LRFN1-201ENST00000248668 MCTP1Q6DN14 999 aa19.16■□□□□ 0.66
LRFN1-201ENST00000248668 PANK2Q9BZ23 570 aa19.16■□□□□ 0.66
LRFN1-201ENST00000248668 KIF1AQ12756 1690 aa19.16■□□□□ 0.66
LRFN1-201ENST00000248668 STRN4Q9NRL3 753 aa19.16■□□□□ 0.66
LRFN1-201ENST00000248668 TNS3Q68CZ2 1445 aa19.16■□□□□ 0.66
LRFN1-201ENST00000248668 HSP90AB4PQ58FF6 505 aa19.15■□□□□ 0.66
LRFN1-201ENST00000248668 TMX3Q96JJ7 454 aa19.15■□□□□ 0.66
LRFN1-201ENST00000248668 BAG4O95429 457 aaKnown RBP19.15■□□□□ 0.66
LRFN1-201ENST00000248668 NEXNQ0ZGT2 675 aa19.15■□□□□ 0.66
LRFN1-201ENST00000248668 CNTROBQ8N137 903 aa19.15■□□□□ 0.66
LRFN1-201ENST00000248668 ALS2Q96Q42 1657 aa19.15■□□□□ 0.66
LRFN1-201ENST00000248668 DTNBO60941 627 aa19.15■□□□□ 0.66
LRFN1-201ENST00000248668 EPHA10Q5JZY3 1008 aa19.15■□□□□ 0.66
LRFN1-201ENST00000248668 HSP90AA2PQ14568 343 aaPredicted RBP19.14■□□□□ 0.65
LRFN1-201ENST00000248668 DDX54Q8TDD1 881 aaKnown RBP19.14■□□□□ 0.65
LRFN1-201ENST00000248668 NCLP19338 710 aaKnown RBP19.14■□□□□ 0.65
LRFN1-201ENST00000248668 FOXD4L6Q3SYB3 417 aaPredicted RBP19.14■□□□□ 0.65
LRFN1-201ENST00000248668 FOXD4L3Q6VB84 417 aaPredicted RBP19.14■□□□□ 0.65
LRFN1-201ENST00000248668 DCAF5Q96JK2 942 aa19.14■□□□□ 0.65
LRFN1-201ENST00000248668 TLR7Q9NYK1 1049 aaKnown RBP19.14■□□□□ 0.65
LRFN1-201ENST00000248668 G3BP1Q13283 466 aaKnown RBP eCLIP19.13■□□□□ 0.65
LRFN1-201ENST00000248668 SNRPA1P09661 255 aaKnown RBP19.13■□□□□ 0.65
LRFN1-201ENST00000248668 LARP1Q6PKG0 1096 aaKnown RBP19.13■□□□□ 0.65
LRFN1-201ENST00000248668 CCDC9Q9Y3X0 531 aaKnown RBP19.13■□□□□ 0.65
LRFN1-201ENST00000248668 NEURL1BA8MQ27 555 aa19.13■□□□□ 0.65
LRFN1-201ENST00000248668 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.65
LRFN1-201ENST00000248668 ANKRD13DQ6ZTN6 518 aa19.13■□□□□ 0.65
LRFN1-201ENST00000248668 AOX1Q06278 1338 aa19.12■□□□□ 0.65
LRFN1-201ENST00000248668 OVOS2A0A0G2JMS6 1433 aa19.12■□□□□ 0.65
LRFN1-201ENST00000248668 SASH1O94885 1247 aa19.12■□□□□ 0.65
LRFN1-201ENST00000248668 MTX1Q13505 466 aa19.12■□□□□ 0.65
LRFN1-201ENST00000248668 CPA1P15085 419 aa19.12■□□□□ 0.65
LRFN1-201ENST00000248668 UBE3BQ7Z3V4 1068 aa19.12■□□□□ 0.65
LRFN1-201ENST00000248668 EAF2Q96CJ1 260 aaPredicted RBP19.12■□□□□ 0.65
LRFN1-201ENST00000248668 FMNL2Q96PY5 1086 aa19.12■□□□□ 0.65
LRFN1-201ENST00000248668 DIAPH3Q9NSV4 1193 aa19.12■□□□□ 0.65
LRFN1-201ENST00000248668 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
LRFN1-201ENST00000248668 GOLGA6L22H0YM25 854 aa19.11■□□□□ 0.65
LRFN1-201ENST00000248668 SGSM2O43147 1006 aa19.11■□□□□ 0.65
LRFN1-201ENST00000248668 GLRX3O76003 335 aaKnown RBP19.11■□□□□ 0.65
LRFN1-201ENST00000248668 GCKRQ14397 625 aa19.11■□□□□ 0.65
LRFN1-201ENST00000248668 L1TD1Q5T7N2 865 aaKnown RBP19.11■□□□□ 0.65
LRFN1-201ENST00000248668 ECHDC1Q9NTX5 307 aa19.11■□□□□ 0.65
LRFN1-201ENST00000248668 DDX49Q9Y6V7 483 aaKnown RBP19.11■□□□□ 0.65
LRFN1-201ENST00000248668 N4BP2Q86UW6 1770 aaPredicted RBP19.11■□□□□ 0.65
LRFN1-201ENST00000248668 ZNF330Q9Y3S2 320 aaPredicted RBP19.1■□□□□ 0.65
LRFN1-201ENST00000248668 NUCB2P80303 420 aa19.1■□□□□ 0.65
LRFN1-201ENST00000248668 KIAA1211Q6ZU35 1233 aa19.1■□□□□ 0.65
LRFN1-201ENST00000248668 BOLA2Q9H3K6 86 aa19.1■□□□□ 0.65
LRFN1-201ENST00000248668 RASEFQ8IZ41 740 aa19.1■□□□□ 0.65
LRFN1-201ENST00000248668 ZDHHC9Q9Y397 364 aa19.1■□□□□ 0.65
LRFN1-201ENST00000248668 METTL22Q9BUU2 404 aaPredicted RBP19.09■□□□□ 0.65
LRFN1-201ENST00000248668 DNAJC5Q9H3Z4 198 aa19.09■□□□□ 0.65
LRFN1-201ENST00000248668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.09■□□□□ 0.65
LRFN1-201ENST00000248668 CHMP3Q9Y3E7 222 aa19.09■□□□□ 0.65
LRFN1-201ENST00000248668 NDUFB9Q9Y6M9 179 aa19.09■□□□□ 0.65
LRFN1-201ENST00000248668 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.65
LRFN1-201ENST00000248668 GAS2L3Q86XJ1 694 aa19.08■□□□□ 0.65
LRFN1-201ENST00000248668 EDC3Q96F86 508 aaKnown RBP19.08■□□□□ 0.64
LRFN1-201ENST00000248668 GPATCH3Q96I76 525 aa19.08■□□□□ 0.64
LRFN1-201ENST00000248668 SLAIN2Q9P270 581 aa19.08■□□□□ 0.64
LRFN1-201ENST00000248668 FSD2A1L4K1 749 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 HSPA4P34932 840 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 PTH1RQ03431 593 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 ERC1Q8IUD2 1116 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 TPRNQ4KMQ1 711 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 ZCRB1Q8TBF4 217 aaKnown RBP19.07■□□□□ 0.64
LRFN1-201ENST00000248668 LSG1Q9H089 658 aaKnown RBP19.07■□□□□ 0.64
LRFN1-201ENST00000248668 TUBGCP6Q96RT7 1819 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 C5P01031 1676 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 TTC41PQ6P2S7 1318 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 RAD50Q92878 1312 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 A0A087WZG4 1122 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 CWC22Q9HCG8 908 aaKnown RBP19.07■□□□□ 0.64
LRFN1-201ENST00000248668 HDAC5Q9UQL6 1122 aa19.07■□□□□ 0.64
LRFN1-201ENST00000248668 DCCP43146 1447 aa19.06■□□□□ 0.64
LRFN1-201ENST00000248668 PRPF40AO75400 957 aaKnown RBP19.06■□□□□ 0.64
LRFN1-201ENST00000248668 A1BGP04217 495 aa19.06■□□□□ 0.64
LRFN1-201ENST00000248668 FAM227BQ96M60 508 aa19.06■□□□□ 0.64
LRFN1-201ENST00000248668 SNX14Q9Y5W7 946 aa19.06■□□□□ 0.64
LRFN1-201ENST00000248668 SIPA1L3O60292 1781 aaPredicted RBP19.06■□□□□ 0.64
LRFN1-201ENST00000248668 CYP2E1P05181 493 aaPredicted RBP19.06■□□□□ 0.64
LRFN1-201ENST00000248668 LRP10Q7Z4F1 713 aa19.06■□□□□ 0.64
LRFN1-201ENST00000248668 ANAPC15P60006 121 aa19.06■□□□□ 0.64
LRFN1-201ENST00000248668 EVA1CP58658 441 aa19.05■□□□□ 0.64
LRFN1-201ENST00000248668 TTLL7Q6ZT98 887 aa19.05■□□□□ 0.64
LRFN1-201ENST00000248668 PRPF40BQ6NWY9 871 aaKnown RBP19.05■□□□□ 0.64
LRFN1-201ENST00000248668 ZBTB3Q9H5J0 574 aa19.05■□□□□ 0.64
LRFN1-201ENST00000248668 COL18A1P39060 1754 aa19.05■□□□□ 0.64
LRFN1-201ENST00000248668 NBPF26B4DH59 902 aa19.04■□□□□ 0.64
LRFN1-201ENST00000248668 NBPF14Q5TI25 921 aa19.04■□□□□ 0.64
LRFN1-201ENST00000248668 CAVIN1Q6NZI2 390 aaKnown RBP19.04■□□□□ 0.64
LRFN1-201ENST00000248668 NBPF10Q6P3W6 841 aaKnown RBP19.04■□□□□ 0.64
LRFN1-201ENST00000248668 NBPF15Q8N660 670 aa19.04■□□□□ 0.64
LRFN1-201ENST00000248668 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
LRFN1-201ENST00000248668 UTYO14607 1347 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms