RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ARGLU1Q9NWB6 273 aaPredicted RBP13.67□□□□□ -0.22
SOX9-201ENST00000245479 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
SOX9-201ENST00000245479 GIMAP6Q6P9H5 292 aa13.67□□□□□ -0.22
SOX9-201ENST00000245479 FMNL2Q96PY5 1086 aa13.67□□□□□ -0.22
SOX9-201ENST00000245479 MLH3Q9UHC1 1453 aa13.67□□□□□ -0.22
SOX9-201ENST00000245479 KIF1BPQ96EK5 621 aa13.67□□□□□ -0.22
SOX9-201ENST00000245479 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
SOX9-201ENST00000245479 GPTP24298 496 aa13.66□□□□□ -0.22
SOX9-201ENST00000245479 ZNF445P59923 1031 aa13.66□□□□□ -0.22
SOX9-201ENST00000245479 CCDC183Q5T5S1 534 aa13.66□□□□□ -0.22
SOX9-201ENST00000245479 ATP2B1P20020 1258 aa13.66□□□□□ -0.22
SOX9-201ENST00000245479 CABP4P57796 275 aa13.66□□□□□ -0.22
SOX9-201ENST00000245479 HAND2P61296 217 aa13.66□□□□□ -0.22
SOX9-201ENST00000245479 CCT2P78371 535 aaKnown RBP13.66□□□□□ -0.22
SOX9-201ENST00000245479 PDRG1Q9NUG6 133 aa13.66□□□□□ -0.22
SOX9-201ENST00000245479 TULP1O00294 542 aaPredicted RBP13.66□□□□□ -0.22
SOX9-201ENST00000245479 RAB11FIP3O75154 756 aa13.66□□□□□ -0.22
SOX9-201ENST00000245479 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
SOX9-201ENST00000245479 KIDINS220Q9ULH0 1771 aa13.65□□□□□ -0.22
SOX9-201ENST00000245479 SF3A1Q15459 793 aaKnown RBP13.65□□□□□ -0.22
SOX9-201ENST00000245479 GOLGA6L1Q8N7Z2 621 aa13.65□□□□□ -0.22
SOX9-201ENST00000245479 MROH2AA6NES4 1674 aa13.65□□□□□ -0.22
SOX9-201ENST00000245479 FLT4P35916 1363 aa13.65□□□□□ -0.22
SOX9-201ENST00000245479 A0A087WZG4 1122 aa13.65□□□□□ -0.22
SOX9-201ENST00000245479 ZNF500O60304 480 aaPredicted RBP13.65□□□□□ -0.22
SOX9-201ENST00000245479 KIF20AO95235 890 aa13.65□□□□□ -0.22
SOX9-201ENST00000245479 RASEFQ8IZ41 740 aa13.65□□□□□ -0.22
SOX9-201ENST00000245479 PRDM11Q9NQV5 511 aa13.65□□□□□ -0.22
SOX9-201ENST00000245479 TMEM2Q9UHN6 1383 aa13.65□□□□□ -0.23
SOX9-201ENST00000245479 QRICH2Q9H0J4 1663 aa13.64□□□□□ -0.23
SOX9-201ENST00000245479 TNNT1P13805 278 aa13.64□□□□□ -0.23
SOX9-201ENST00000245479 AK2P54819 239 aa13.64□□□□□ -0.23
SOX9-201ENST00000245479 BICC1Q9H694 974 aaKnown RBP13.64□□□□□ -0.23
SOX9-201ENST00000245479 CCDC82Q8N4S0 544 aa13.64□□□□□ -0.23
SOX9-201ENST00000245479 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
SOX9-201ENST00000245479 TLR7Q9NYK1 1049 aaKnown RBP13.64□□□□□ -0.23
SOX9-201ENST00000245479 USP48Q86UV5 1035 aa13.64□□□□□ -0.23
SOX9-201ENST00000245479 ZBTB9Q96C00 473 aa13.64□□□□□ -0.23
SOX9-201ENST00000245479 DBF4Q9UBU7 674 aaPredicted RBP13.64□□□□□ -0.23
SOX9-201ENST00000245479 MTMR7Q9Y216 660 aa13.64□□□□□ -0.23
SOX9-201ENST00000245479 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
SOX9-201ENST00000245479 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 RUFY2Q8WXA3 655 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 CYP46A1Q9Y6A2 500 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 TIMM10P62072 90 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 DNM1Q05193 864 aaKnown RBP13.63□□□□□ -0.23
SOX9-201ENST00000245479 TNMDQ9H2S6 317 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 TMEM63CQ9P1W3 806 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 PTH1RQ03431 593 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 ZNF594Q96JF6 807 aaPredicted RBP13.63□□□□□ -0.23
SOX9-201ENST00000245479 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
SOX9-201ENST00000245479 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
SOX9-201ENST00000245479 GJB2P29033 226 aa13.62□□□□□ -0.23
SOX9-201ENST00000245479 AXIN2Q9Y2T1 843 aa13.62□□□□□ -0.23
SOX9-201ENST00000245479 LRRC7Q96NW7 1537 aa13.62□□□□□ -0.23
SOX9-201ENST00000245479 U2AF2P26368 475 aaKnown RBP eCLIP13.62□□□□□ -0.23
SOX9-201ENST00000245479 ADGRB3O60242 1522 aa13.62□□□□□ -0.23
SOX9-201ENST00000245479 CPS1P31327 1500 aa13.62□□□□□ -0.23
SOX9-201ENST00000245479 ADCK5Q3MIX3 580 aa13.62□□□□□ -0.23
SOX9-201ENST00000245479 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
SOX9-201ENST00000245479 ERCC4Q92889 916 aaPredicted RBP13.62□□□□□ -0.23
SOX9-201ENST00000245479 LMBRD1Q9NUN5 540 aa13.62□□□□□ -0.23
SOX9-201ENST00000245479 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 GOLIM4O00461 696 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 CALCOCO1Q9P1Z2 691 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 IQGAP1P46940 1657 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 ZFYVE9O95405 1425 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 A0A087WWV3 80 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 ADGRB1O14514 1584 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 PLEKHG3A1L390 1219 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 SUCLG2Q96I99 432 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 NUP62CLQ9H1M0 184 aa13.61□□□□□ -0.23
SOX9-201ENST00000245479 VGLL3A8MV65 326 aa13.6□□□□□ -0.23
SOX9-201ENST00000245479 ISM2Q6H9L7 571 aa13.6□□□□□ -0.23
SOX9-201ENST00000245479 GPT2Q8TD30 523 aa13.6□□□□□ -0.23
SOX9-201ENST00000245479 ECHDC1Q9NTX5 307 aa13.6□□□□□ -0.23
SOX9-201ENST00000245479 HECW2Q9P2P5 1572 aa13.6□□□□□ -0.23
SOX9-201ENST00000245479 NMIQ13287 307 aaPredicted RBP13.6□□□□□ -0.23
SOX9-201ENST00000245479 CAMSAP1Q5T5Y3 1602 aa13.6□□□□□ -0.23
SOX9-201ENST00000245479 PTPRMP28827 1452 aa13.6□□□□□ -0.23
SOX9-201ENST00000245479 EIF4A1P60842 406 aaKnown RBP13.6□□□□□ -0.23
SOX9-201ENST00000245479 BLOC1S2Q6QNY1 142 aa13.6□□□□□ -0.23
SOX9-201ENST00000245479 KRT85P78386 507 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 LMBR1LQ6UX01 489 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 CCDC144CPQ8IYA2 1237 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 ZNF496Q96IT1 587 aaPredicted RBP13.59□□□□□ -0.23
SOX9-201ENST00000245479 TIGD1Q96MW7 591 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 PIK3R4Q99570 1358 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
SOX9-201ENST00000245479 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 CCDC73Q6ZRK6 1079 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 IQSEC3Q9UPP2 1182 aaPredicted RBP13.59□□□□□ -0.23
SOX9-201ENST00000245479 RBM8AQ9Y5S9 174 aaKnown RBP13.59□□□□□ -0.23
SOX9-201ENST00000245479 A2ML1A8K2U0 1454 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms