RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PALD1Q9ULE6 856 aa26.66■■□□□ 1.86
RNF39-201ENST00000244360 KAZALD1Q96I82 304 aa26.65■■□□□ 1.86
RNF39-201ENST00000244360 LARP1Q6PKG0 1096 aaKnown RBP26.65■■□□□ 1.86
RNF39-201ENST00000244360 ZNF496Q96IT1 587 aaPredicted RBP26.65■■□□□ 1.86
RNF39-201ENST00000244360 SUCLG2Q96I99 432 aa26.64■■□□□ 1.86
RNF39-201ENST00000244360 IL25Q9H293 177 aa26.64■■□□□ 1.86
RNF39-201ENST00000244360 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.64■■□□□ 1.86
RNF39-201ENST00000244360 IGKV5-2P06315 115 aa26.63■■□□□ 1.85
RNF39-201ENST00000244360 LRP10Q7Z4F1 713 aa26.63■■□□□ 1.85
RNF39-201ENST00000244360 CNTROBQ8N137 903 aa26.63■■□□□ 1.85
RNF39-201ENST00000244360 GLRX3O76003 335 aaKnown RBP26.63■■□□□ 1.85
RNF39-201ENST00000244360 NEK4P51957 841 aa26.63■■□□□ 1.85
RNF39-201ENST00000244360 OS9Q13438 667 aaPredicted RBP26.63■■□□□ 1.85
RNF39-201ENST00000244360 CLASRPQ8N2M8 674 aaKnown RBP26.63■■□□□ 1.85
RNF39-201ENST00000244360 AIMP1Q12904 312 aaKnown RBP26.62■■□□□ 1.85
RNF39-201ENST00000244360 GLI3P10071 1580 aa26.62■■□□□ 1.85
RNF39-201ENST00000244360 SGSM2O43147 1006 aa26.62■■□□□ 1.85
RNF39-201ENST00000244360 BAG4O95429 457 aaKnown RBP26.61■■□□□ 1.85
RNF39-201ENST00000244360 SNRPA1P09661 255 aaKnown RBP26.61■■□□□ 1.85
RNF39-201ENST00000244360 BRINP3Q76B58 766 aa26.61■■□□□ 1.85
RNF39-201ENST00000244360 HSPA4P34932 840 aa26.61■■□□□ 1.85
RNF39-201ENST00000244360 HSPA2P54652 639 aa26.61■■□□□ 1.85
RNF39-201ENST00000244360 KLHL40Q2TBA0 621 aa26.61■■□□□ 1.85
RNF39-201ENST00000244360 RIC3Q7Z5B4 369 aa26.61■■□□□ 1.85
RNF39-201ENST00000244360 DNAJC5Q9H3Z4 198 aa26.61■■□□□ 1.85
RNF39-201ENST00000244360 CLCN1P35523 988 aa26.6■■□□□ 1.85
RNF39-201ENST00000244360 XAGE3Q8WTP9 111 aa26.6■■□□□ 1.85
RNF39-201ENST00000244360 BICC1Q9H694 974 aaKnown RBP26.6■■□□□ 1.85
RNF39-201ENST00000244360 NEURL1BA8MQ27 555 aa26.59■■□□□ 1.85
RNF39-201ENST00000244360 ZGPATQ8N5A5 531 aaKnown RBP26.59■■□□□ 1.85
RNF39-201ENST00000244360 RAD50Q92878 1312 aa26.59■■□□□ 1.85
RNF39-201ENST00000244360 METTL22Q9BUU2 404 aaPredicted RBP26.59■■□□□ 1.85
RNF39-201ENST00000244360 PA2G4Q9UQ80 394 aaKnown RBP26.59■■□□□ 1.85
RNF39-201ENST00000244360 MAP4K4O95819 1239 aaPredicted RBP26.59■■□□□ 1.85
RNF39-201ENST00000244360 TMX3Q96JJ7 454 aa26.59■■□□□ 1.85
RNF39-201ENST00000244360 NEXNQ0ZGT2 675 aa26.58■■□□□ 1.85
RNF39-201ENST00000244360 CUL4AQ13619 759 aa26.58■■□□□ 1.85
RNF39-201ENST00000244360 TTC5Q8N0Z6 440 aa26.58■■□□□ 1.85
RNF39-201ENST00000244360 FMNL2Q96PY5 1086 aa26.58■■□□□ 1.85
RNF39-201ENST00000244360 ECHDC1Q9NTX5 307 aa26.58■■□□□ 1.85
RNF39-201ENST00000244360 COPS6Q7L5N1 327 aa26.58■■□□□ 1.85
RNF39-201ENST00000244360 MYL6BP14649 208 aa26.57■■□□□ 1.84
RNF39-201ENST00000244360 GCKRQ14397 625 aa26.57■■□□□ 1.84
RNF39-201ENST00000244360 LAMB4A4D0S4 1761 aa26.57■■□□□ 1.84
RNF39-201ENST00000244360 GPATCH3Q96I76 525 aa26.57■■□□□ 1.84
RNF39-201ENST00000244360 LSG1Q9H089 658 aaKnown RBP26.56■■□□□ 1.84
RNF39-201ENST00000244360 USP16Q9Y5T5 823 aa26.56■■□□□ 1.84
RNF39-201ENST00000244360 WDR17Q8IZU2 1322 aa26.55■■□□□ 1.84
RNF39-201ENST00000244360 PKP1Q13835 747 aa26.55■■□□□ 1.84
RNF39-201ENST00000244360 COL15A1P39059 1388 aa26.55■■□□□ 1.84
RNF39-201ENST00000244360 SASH1O94885 1247 aa26.54■■□□□ 1.84
RNF39-201ENST00000244360 IFIT2P09913 472 aaKnown RBP26.54■■□□□ 1.84
RNF39-201ENST00000244360 SOS2Q07890 1332 aaPredicted RBP26.54■■□□□ 1.84
RNF39-201ENST00000244360 CABP4P57796 275 aa26.54■■□□□ 1.84
RNF39-201ENST00000244360 ANKRD13DQ6ZTN6 518 aa26.54■■□□□ 1.84
RNF39-201ENST00000244360 GAS2L3Q86XJ1 694 aa26.54■■□□□ 1.84
RNF39-201ENST00000244360 INTS4Q96HW7 963 aaKnown RBP26.54■■□□□ 1.84
RNF39-201ENST00000244360 MYD88Q99836 296 aa26.53■■□□□ 1.84
RNF39-201ENST00000244360 ZDHHC9Q9Y397 364 aa26.53■■□□□ 1.84
RNF39-201ENST00000244360 DDX49Q9Y6V7 483 aaKnown RBP26.53■■□□□ 1.84
RNF39-201ENST00000244360 G3BP1Q13283 466 aaKnown RBP eCLIP26.52■■□□□ 1.84
RNF39-201ENST00000244360 AACSQ86V21 672 aa26.52■■□□□ 1.84
RNF39-201ENST00000244360 COL5A2P05997 1499 aaPredicted RBP26.51■■□□□ 1.83
RNF39-201ENST00000244360 TRIM44Q96DX7 344 aaPredicted RBP26.51■■□□□ 1.83
RNF39-201ENST00000244360 STRCQ7RTU9 1775 aa26.51■■□□□ 1.83
RNF39-201ENST00000244360 ARFGEF2Q9Y6D5 1785 aa26.51■■□□□ 1.83
RNF39-201ENST00000244360 PCDH11XQ9BZA7 1347 aa26.51■■□□□ 1.83
RNF39-201ENST00000244360 PCDH11YQ9BZA8 1340 aa26.51■■□□□ 1.83
RNF39-201ENST00000244360 ERBB4Q15303 1308 aa26.5■■□□□ 1.83
RNF39-201ENST00000244360 RUFY2Q8WXA3 655 aa26.5■■□□□ 1.83
RNF39-201ENST00000244360 EAF2Q96CJ1 260 aaPredicted RBP26.5■■□□□ 1.83
RNF39-201ENST00000244360 EVI5LQ96CN4 794 aa26.5■■□□□ 1.83
RNF39-201ENST00000244360 PRDM11Q9NQV5 511 aa26.5■■□□□ 1.83
RNF39-201ENST00000244360 EPHA10Q5JZY3 1008 aa26.49■■□□□ 1.83
RNF39-201ENST00000244360 DIAPH3Q9NSV4 1193 aa26.49■■□□□ 1.83
RNF39-201ENST00000244360 SNX14Q9Y5W7 946 aa26.49■■□□□ 1.83
RNF39-201ENST00000244360 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.49■■□□□ 1.83
RNF39-201ENST00000244360 ABCA3Q99758 1704 aa26.49■■□□□ 1.83
RNF39-201ENST00000244360 UBR2Q8IWV8 1755 aa26.49■■□□□ 1.83
RNF39-201ENST00000244360 CWC27Q6UX04 472 aaKnown RBP26.49■■□□□ 1.83
RNF39-201ENST00000244360 UPF3BQ9BZI7 483 aaKnown RBP26.49■■□□□ 1.83
RNF39-201ENST00000244360 CCDC173Q0VFZ6 552 aa26.48■■□□□ 1.83
RNF39-201ENST00000244360 KIAA1211Q6ZU35 1233 aa26.48■■□□□ 1.83
RNF39-201ENST00000244360 ZNF445P59923 1031 aa26.47■■□□□ 1.83
RNF39-201ENST00000244360 PAPPAQ13219 1627 aa26.47■■□□□ 1.83
RNF39-201ENST00000244360 ESPNB1AK53 854 aa26.47■■□□□ 1.83
RNF39-201ENST00000244360 RABL6Q3YEC7 729 aaPredicted RBP26.47■■□□□ 1.83
RNF39-201ENST00000244360 ZCRB1Q8TBF4 217 aaKnown RBP26.47■■□□□ 1.83
RNF39-201ENST00000244360 MCTP1Q6DN14 999 aa26.46■■□□□ 1.83
RNF39-201ENST00000244360 COPRSQ9NQ92 184 aa26.46■■□□□ 1.83
RNF39-201ENST00000244360 AFDNP55196 1824 aaKnown RBP26.46■■□□□ 1.83
RNF39-201ENST00000244360 ERVV-2B6SEH9 535 aa26.46■■□□□ 1.83
RNF39-201ENST00000244360 NKX1-1Q15270 411 aaPredicted RBP26.46■■□□□ 1.83
RNF39-201ENST00000244360 PLBD2Q8NHP8 589 aa26.46■■□□□ 1.83
RNF39-201ENST00000244360 ANP32BQ92688 251 aaKnown RBP26.46■■□□□ 1.83
RNF39-201ENST00000244360 LMBRD1Q9NUN5 540 aa26.46■■□□□ 1.83
RNF39-201ENST00000244360 SLAIN2Q9P270 581 aa26.46■■□□□ 1.83
RNF39-201ENST00000244360 TTC14Q96N46 770 aa26.45■■□□□ 1.82
RNF39-201ENST00000244360 RFX5P48382 616 aaPredicted RBP26.45■■□□□ 1.82
RNF39-201ENST00000244360 PIP4K2AP48426 406 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms