RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 BICC1Q9H694 974 aaKnown RBP22.72■■□□□ 1.23
HOXC11-201ENST00000243082 HSCBQ8IWL3 235 aa22.71■■□□□ 1.23
HOXC11-201ENST00000243082 COL22A1Q8NFW1 1626 aaPredicted RBP22.71■■□□□ 1.23
HOXC11-201ENST00000243082 TNS2Q63HR2 1409 aa22.71■■□□□ 1.23
HOXC11-201ENST00000243082 TOGARAM1Q9Y4F4 1720 aa22.7■■□□□ 1.22
HOXC11-201ENST00000243082 PA2G4Q9UQ80 394 aaKnown RBP22.69■■□□□ 1.22
HOXC11-201ENST00000243082 DISP2A7MBM2 1401 aa22.69■■□□□ 1.22
HOXC11-201ENST00000243082 PTCD1O75127 700 aaKnown RBP22.69■■□□□ 1.22
HOXC11-201ENST00000243082 PLBD2Q8NHP8 589 aa22.69■■□□□ 1.22
HOXC11-201ENST00000243082 COL16A1Q07092 1604 aaPredicted RBP22.69■■□□□ 1.22
HOXC11-201ENST00000243082 ERC2O15083 957 aa22.68■■□□□ 1.22
HOXC11-201ENST00000243082 UNC5CLQ8IV45 518 aa22.68■■□□□ 1.22
HOXC11-201ENST00000243082 PI4K2BQ8TCG2 481 aa22.68■■□□□ 1.22
HOXC11-201ENST00000243082 OS9Q13438 667 aaPredicted RBP22.67■■□□□ 1.22
HOXC11-201ENST00000243082 SPRYD3Q8NCJ5 442 aa22.67■■□□□ 1.22
HOXC11-201ENST00000243082 RBM42Q9BTD8 480 aaKnown RBP22.67■■□□□ 1.22
HOXC11-201ENST00000243082 ARFGEF2Q9Y6D5 1785 aa22.67■■□□□ 1.22
HOXC11-201ENST00000243082 TRIM6-TRIM34B2RNG4 842 aa22.67■■□□□ 1.22
HOXC11-201ENST00000243082 REC8O95072 547 aa22.67■■□□□ 1.22
HOXC11-201ENST00000243082 RILPL2Q969X0 211 aa22.67■■□□□ 1.22
HOXC11-201ENST00000243082 TMOD3Q9NYL9 352 aa22.67■■□□□ 1.22
HOXC11-201ENST00000243082 A1BGP04217 495 aa22.66■■□□□ 1.22
HOXC11-201ENST00000243082 EPHA10Q5JZY3 1008 aa22.66■■□□□ 1.22
HOXC11-201ENST00000243082 CHMLP26374 656 aa22.65■■□□□ 1.22
HOXC11-201ENST00000243082 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
HOXC11-201ENST00000243082 CD2BP2O95400 341 aaKnown RBP22.65■■□□□ 1.22
HOXC11-201ENST00000243082 ERC1Q8IUD2 1116 aa22.65■■□□□ 1.22
HOXC11-201ENST00000243082 PIGBQ92521 554 aa22.64■■□□□ 1.22
HOXC11-201ENST00000243082 ESYT1Q9BSJ8 1104 aa22.64■■□□□ 1.22
HOXC11-201ENST00000243082 ATP5J2-PTCD1G3V325 749 aa22.64■■□□□ 1.21
HOXC11-201ENST00000243082 TTLL7Q6ZT98 887 aa22.64■■□□□ 1.21
HOXC11-201ENST00000243082 CLASRPQ8N2M8 674 aaKnown RBP22.64■■□□□ 1.21
HOXC11-201ENST00000243082 FRAT2O75474 233 aaPredicted RBP22.63■■□□□ 1.21
HOXC11-201ENST00000243082 COL15A1P39059 1388 aa22.62■■□□□ 1.21
HOXC11-201ENST00000243082 SASH1O94885 1247 aa22.62■■□□□ 1.21
HOXC11-201ENST00000243082 JARID2Q92833 1246 aaPredicted RBP22.62■■□□□ 1.21
HOXC11-201ENST00000243082 AFDNP55196 1824 aaKnown RBP22.62■■□□□ 1.21
HOXC11-201ENST00000243082 TTC41PQ6P2S7 1318 aa22.62■■□□□ 1.21
HOXC11-201ENST00000243082 RABEP1Q15276 862 aa22.62■■□□□ 1.21
HOXC11-201ENST00000243082 ASAP1Q9ULH1 1129 aa22.62■■□□□ 1.21
HOXC11-201ENST00000243082 CASP7P55210 303 aa22.61■■□□□ 1.21
HOXC11-201ENST00000243082 UBE3BQ7Z3V4 1068 aa22.61■■□□□ 1.21
HOXC11-201ENST00000243082 A0A087WZG4 1122 aa22.6■■□□□ 1.21
HOXC11-201ENST00000243082 G3BP1Q13283 466 aaKnown RBP eCLIP22.6■■□□□ 1.21
HOXC11-201ENST00000243082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.6■■□□□ 1.21
HOXC11-201ENST00000243082 PLCH1Q4KWH8 1693 aa22.6■■□□□ 1.21
HOXC11-201ENST00000243082 MAP4K4O95819 1239 aaPredicted RBP22.6■■□□□ 1.21
HOXC11-201ENST00000243082 RABL6Q3YEC7 729 aaPredicted RBP22.6■■□□□ 1.21
HOXC11-201ENST00000243082 ATG3Q9NT62 314 aa22.6■■□□□ 1.21
HOXC11-201ENST00000243082 NUP188Q5SRE5 1749 aa22.59■■□□□ 1.21
HOXC11-201ENST00000243082 DDIT3P35638 169 aa22.58■■□□□ 1.21
HOXC11-201ENST00000243082 VSIG10Q8N0Z9 540 aa22.58■■□□□ 1.21
HOXC11-201ENST00000243082 KLHDC4Q8TBB5 520 aa22.58■■□□□ 1.21
HOXC11-201ENST00000243082 K7ELQ4 463 aaPredicted RBP22.58■■□□□ 1.2
HOXC11-201ENST00000243082 EXOC5O00471 708 aa22.58■■□□□ 1.2
HOXC11-201ENST00000243082 GLRX3O76003 335 aaKnown RBP22.58■■□□□ 1.2
HOXC11-201ENST00000243082 RFX5P48382 616 aaPredicted RBP22.58■■□□□ 1.2
HOXC11-201ENST00000243082 ITGB4P16144 1822 aa22.57■■□□□ 1.2
HOXC11-201ENST00000243082 H7C1W4 665 aa22.57■■□□□ 1.2
HOXC11-201ENST00000243082 IFIT2P09913 472 aaKnown RBP22.57■■□□□ 1.2
HOXC11-201ENST00000243082 SIL1Q9H173 461 aa22.57■■□□□ 1.2
HOXC11-201ENST00000243082 ECHDC1Q9NTX5 307 aa22.57■■□□□ 1.2
HOXC11-201ENST00000243082 CHMP5Q9NZZ3 219 aa22.57■■□□□ 1.2
HOXC11-201ENST00000243082 PHLPP1O60346 1717 aa22.57■■□□□ 1.2
HOXC11-201ENST00000243082 AACSQ86V21 672 aa22.57■■□□□ 1.2
HOXC11-201ENST00000243082 EAF2Q96CJ1 260 aaPredicted RBP22.57■■□□□ 1.2
HOXC11-201ENST00000243082 COPRSQ9NQ92 184 aa22.57■■□□□ 1.2
HOXC11-201ENST00000243082 ADAMTS2O95450 1211 aa22.56■■□□□ 1.2
HOXC11-201ENST00000243082 DNAJC10Q8IXB1 793 aa22.56■■□□□ 1.2
HOXC11-201ENST00000243082 CNTROBQ8N137 903 aa22.56■■□□□ 1.2
HOXC11-201ENST00000243082 TEX13AQ9BXU3 409 aaPredicted RBP22.56■■□□□ 1.2
HOXC11-201ENST00000243082 ZBTB3Q9H5J0 574 aa22.56■■□□□ 1.2
HOXC11-201ENST00000243082 BCL9O00512 1426 aa22.56■■□□□ 1.2
HOXC11-201ENST00000243082 IL25Q9H293 177 aa22.55■■□□□ 1.2
HOXC11-201ENST00000243082 PTPN12Q05209 780 aaKnown RBP22.55■■□□□ 1.2
HOXC11-201ENST00000243082 CWC25Q9NXE8 425 aaPredicted RBP22.55■■□□□ 1.2
HOXC11-201ENST00000243082 LRP6O75581 1613 aa22.55■■□□□ 1.2
HOXC11-201ENST00000243082 GPATCH3Q96I76 525 aa22.54■■□□□ 1.2
HOXC11-201ENST00000243082 AK9Q5TCS8 1911 aa22.54■■□□□ 1.2
HOXC11-201ENST00000243082 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
HOXC11-201ENST00000243082 ANO2Q9NQ90 1003 aa22.53■■□□□ 1.2
HOXC11-201ENST00000243082 FOXO4P98177 505 aa22.53■■□□□ 1.2
HOXC11-201ENST00000243082 CCDC191Q8NCU4 936 aa22.53■■□□□ 1.2
HOXC11-201ENST00000243082 DEKP35659 375 aaKnown RBP22.52■■□□□ 1.2
HOXC11-201ENST00000243082 CCDC8Q9H0W5 538 aaPredicted RBP22.52■■□□□ 1.2
HOXC11-201ENST00000243082 SPATA31A1Q5TZJ5 1347 aa22.52■■□□□ 1.2
HOXC11-201ENST00000243082 TJP1Q07157 1748 aa22.51■■□□□ 1.19
HOXC11-201ENST00000243082 NRAPQ86VF7 1730 aa22.51■■□□□ 1.19
HOXC11-201ENST00000243082 EPB41L2O43491 1005 aaKnown RBP22.51■■□□□ 1.19
HOXC11-201ENST00000243082 LMBR1LQ6UX01 489 aa22.51■■□□□ 1.19
HOXC11-201ENST00000243082 SLC4A9Q96Q91 983 aa22.51■■□□□ 1.19
HOXC11-201ENST00000243082 TLR7Q9NYK1 1049 aaKnown RBP22.51■■□□□ 1.19
HOXC11-201ENST00000243082 SGSM2O43147 1006 aa22.5■■□□□ 1.19
HOXC11-201ENST00000243082 STARD3NLO95772 234 aa22.5■■□□□ 1.19
HOXC11-201ENST00000243082 ISCA1Q9BUE6 129 aa22.5■■□□□ 1.19
HOXC11-201ENST00000243082 CDCA7Q9BWT1 371 aaPredicted RBP22.5■■□□□ 1.19
HOXC11-201ENST00000243082 THRAP3Q9Y2W1 955 aaKnown RBP22.5■■□□□ 1.19
HOXC11-201ENST00000243082 PALD1Q9ULE6 856 aa22.49■■□□□ 1.19
HOXC11-201ENST00000243082 MCCP23508 829 aa22.48■■□□□ 1.19
HOXC11-201ENST00000243082 TCIRG1Q13488 830 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms