RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ACSBG1Q96GR2 724 aa12.93□□□□□ -0.34
COPA-201ENST00000241704 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
COPA-201ENST00000241704 A0A087WZG4 1122 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 ZSCAN25Q6NSZ9 544 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 CCDC47Q96A33 483 aaKnown RBP12.92□□□□□ -0.34
COPA-201ENST00000241704 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 XBP1P17861 261 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 ANKRD1Q15327 319 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 ERVK-7P63135 1459 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 GPTP24298 496 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 KRT222Q8N1A0 295 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 ZNF830Q96NB3 372 aaPredicted RBP12.92□□□□□ -0.34
COPA-201ENST00000241704 ANKIB1Q9P2G1 1089 aa12.92□□□□□ -0.34
COPA-201ENST00000241704 ADCY5O95622 1261 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 PIBF1Q8WXW3 757 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 MEIS3Q99687 375 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 EFCAB6Q5THR3 1501 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 KDM5AP29375 1690 aaKnown RBP12.91□□□□□ -0.34
COPA-201ENST00000241704 ANXA1P04083 346 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 RLBP1P12271 317 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.346e-7■■□□□ 13.6
COPA-201ENST00000241704 CHPF2Q9P2E5 772 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 IQGAP3Q86VI3 1631 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 BECN2A8MW95 431 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 GOLGA6L19H0YKK7 550 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 CEP89Q96ST8 783 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 BRMS1Q9HCU9 246 aa12.91□□□□□ -0.34
COPA-201ENST00000241704 PPP1R42Q7Z4L9 355 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 TET3O43151 1660 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 IFIT1P09914 478 aaKnown RBP12.9□□□□□ -0.34
COPA-201ENST00000241704 FOSBP53539 338 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 NUCB1Q02818 461 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 ANKRD44Q8N8A2 993 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 ORAI2Q96SN7 254 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 IFIT5Q13325 482 aaKnown RBP12.9□□□□□ -0.34
COPA-201ENST00000241704 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 TSC1Q92574 1164 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 TNNQ9UQP3 1299 aa12.9□□□□□ -0.34
COPA-201ENST00000241704 SHROOM2Q13796 1616 aa12.9□□□□□ -0.35
COPA-201ENST00000241704 ABCC3O15438 1527 aa12.89□□□□□ -0.35
COPA-201ENST00000241704 ARHGAP31Q2M1Z3 1444 aa12.89□□□□□ -0.35
COPA-201ENST00000241704 METP08581 1390 aa12.89□□□□□ -0.35
COPA-201ENST00000241704 IDH1O75874 414 aaKnown RBP12.89□□□□□ -0.35
COPA-201ENST00000241704 CAVIN4Q5BKX8 364 aa12.89□□□□□ -0.35
COPA-201ENST00000241704 STK11IPQ8N1F8 1099 aa12.89□□□□□ -0.35
COPA-201ENST00000241704 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
COPA-201ENST00000241704 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
COPA-201ENST00000241704 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
COPA-201ENST00000241704 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
COPA-201ENST00000241704 KRT32Q14532 448 aa12.89□□□□□ -0.35
COPA-201ENST00000241704 CLASP1Q7Z460 1538 aa12.89□□□□□ -0.35
COPA-201ENST00000241704 PLEKHG1Q9ULL1 1385 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
COPA-201ENST00000241704 C6orf229H3BNL8 230 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 ZSCAN20P17040 1043 aaPredicted RBP12.88□□□□□ -0.35
COPA-201ENST00000241704 KRT24Q2M2I5 525 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 CTNNA3Q9UI47 895 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 IL2RBP14784 551 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 ALDH1L1O75891 902 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 CCDC73Q6ZRK6 1079 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 ZBTB40Q9NUA8 1239 aa12.88□□□□□ -0.35
COPA-201ENST00000241704 KSR2Q6VAB6 950 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 ZSCAN31Q96LW9 406 aaPredicted RBP12.87□□□□□ -0.35
COPA-201ENST00000241704 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
COPA-201ENST00000241704 TRIM5Q9C035 493 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 CCDC8Q9H0W5 538 aaPredicted RBP12.87□□□□□ -0.35
COPA-201ENST00000241704 ECHDC1Q9NTX5 307 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 ZNF622Q969S3 477 aaKnown RBP eCLIP12.87□□□□□ -0.355e-8■□□□□ 9.7
COPA-201ENST00000241704 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
COPA-201ENST00000241704 KDM4AO75164 1064 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 UBE3BQ7Z3V4 1068 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 PDRG1Q9NUG6 133 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 KIF1BO60333 1816 aa12.87□□□□□ -0.35
COPA-201ENST00000241704 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
COPA-201ENST00000241704 ATP5J2-PTCD1G3V325 749 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 TDO2P48775 406 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 ATP6V1AP38606 617 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 COPS6Q7L5N1 327 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 XAGE3Q8WTP9 111 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 CHL1O00533 1208 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 DCAF5Q96JK2 942 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 UNC13BO14795 1591 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 TNNT1P13805 278 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 ATP2B1P20020 1258 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 ATP8B2P98198 1209 aa12.86□□□□□ -0.35
COPA-201ENST00000241704 TTC22Q5TAA0 569 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms