RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 IPO4Q8TEX9 1081 aaKnown RBP7.76□□□□□ -1.17
CSMD2-201ENST00000241312 SLC52A1Q9NWF4 448 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 DNA2P51530 1060 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 UVSSAQ2YD98 709 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 METTL24Q5JXM2 366 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 CATIPQ7Z7H3 387 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 CNNM3Q8NE01 707 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 TTC14Q96N46 770 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 LARP6Q9BRS8 491 aaKnown RBP7.76□□□□□ -1.17
CSMD2-201ENST00000241312 JADE2Q9NQC1 790 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 STX6O43752 255 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 ZNF165P49910 485 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 TUBB4BP68371 445 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 TSNARE1Q96NA8 513 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 ARFGAP3Q9NP61 516 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 CABP1Q9NZU7 370 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 AMPD3Q01432 767 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 MAP3K12Q12852 859 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 BMP2KLQ5H9B9 411 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 TRMT1Q9NXH9 659 aaKnown RBP7.76□□□□□ -1.17
CSMD2-201ENST00000241312 GNAT3A8MTJ3 354 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 HSF2BPO75031 334 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 C20orf194Q5TEA3 1177 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 SCLT1Q96NL6 688 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 IL1RAPL2Q9NP60 686 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 MTIF2P46199 727 aaKnown RBP7.75□□□□□ -1.17
CSMD2-201ENST00000241312 DNAAF4Q8WXU2 420 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 TROQ12816 1431 aaPredicted RBP7.75□□□□□ -1.17
CSMD2-201ENST00000241312 SLFN5Q08AF3 891 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 CCDC40Q4G0X9 1142 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 NUTM1Q86Y26 1132 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 TMPOP42166 694 aaKnown RBP7.75□□□□□ -1.17
CSMD2-201ENST00000241312 PPP1R14CQ8TAE6 165 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 BCCIPQ9P287 314 aaKnown RBP eCLIP7.75□□□□□ -1.17
CSMD2-201ENST00000241312 RALGAPBQ86X10 1494 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 SLF2Q8IX21 1173 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 CTAGE1Q96RT6 745 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 ITSN2Q9NZM3 1697 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 LIG1P18858 919 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 TOM1L2Q6ZVM7 507 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 ZNF652Q9Y2D9 606 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 NSD2O96028 1365 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 IQCA1Q86XH1 822 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 RMND1Q9NWS8 449 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 SSFA2P28290 1259 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 TBC1D2Q9BYX2 928 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 BMP15O95972 392 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 ZBTB9Q96C00 473 aa7.75□□□□□ -1.17
CSMD2-201ENST00000241312 PRPHP41219 470 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 CAVIN4Q5BKX8 364 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 FBF1Q8TES7 1133 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 TCP11L1Q9NUJ3 509 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 COMMD10Q9Y6G5 202 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 IFIT1P09914 478 aaKnown RBP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 SSRP1Q08945 709 aaKnown RBP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 KLHL40Q2TBA0 621 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 MIS18AQ9NYP9 233 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 DZIP1Q86YF9 867 aaKnown RBP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 OSCARQ8IYS5 282 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 CCDC85AQ96PX6 553 aaPredicted RBP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 IQCGQ9H095 443 aaKnown RBP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 PRDM11Q9NQV5 511 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 STARD3NLO95772 234 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 ERMNQ8TAM6 284 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 SLC12A5Q9H2X9 1139 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 HOMER2Q9NSB8 354 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 GNG11P61952 73 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 DUSP27Q5VZP5 1158 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 CALML4Q96GE6 196 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 PCF11O94913 1555 aaKnown RBP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 LRRC27Q9C0I9 530 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 RBM27Q9P2N5 1060 aaKnown RBP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 CCDC155Q8N6L0 562 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 SLC5A1P13866 664 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 NBPF8Q3BBV2 869 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 PTPRCP08575 1304 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 IQGAP2Q13576 1575 aa7.74□□□□□ -1.17
CSMD2-201ENST00000241312 PABPN1LA6NDY0 278 aaKnown RBP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 TTF1Q15361 905 aaPredicted RBP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.74□□□□□ -1.17
CSMD2-201ENST00000241312 CCDC102BQ68D86 513 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 CRACR2BQ8N4Y2 399 aaPredicted RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 DCAF8L1A6NGE4 600 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 PRPF4BQ13523 1007 aaKnown RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 A0A1W2PRG0 241 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 AKR1B10O60218 316 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 ZSCAN29Q8IWY8 852 aaPredicted RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 OPA1O60313 960 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 POLR3DP05423 398 aaPredicted RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 FAM69CQ0P6D2 419 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 HYPKQ9NX55 129 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 CTAGE9A4FU28 777 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 IFIT5Q13325 482 aaKnown RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 SEPT6Q14141 434 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 SSH1Q8WYL5 1049 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 CCDC96Q2M329 555 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 FAM200AQ8TCP9 573 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 TBC1D5Q92609 795 aa7.73□□□□□ -1.17
CSMD2-201ENST00000241312 THUMPD2Q9BTF0 503 aaKnown RBP7.73□□□□□ -1.17
CSMD2-201ENST00000241312 GDPD2Q9HCC8 539 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms