RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
NPC2-201ENST00000238633 MRC1P22897 1456 aa12.8□□□□□ -0.36
NPC2-201ENST00000238633 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
NPC2-201ENST00000238633 SRGNP10124 158 aa12.8□□□□□ -0.36
NPC2-201ENST00000238633 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
NPC2-201ENST00000238633 FER1L6Q2WGJ9 1857 aa12.79□□□□□ -0.36
NPC2-201ENST00000238633 ANKRD31Q8N7Z5 1873 aa12.79□□□□□ -0.36
NPC2-201ENST00000238633 DEFB115Q30KQ5 88 aa12.79□□□□□ -0.36
NPC2-201ENST00000238633 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
NPC2-201ENST00000238633 STYK1Q6J9G0 422 aa12.79□□□□□ -0.36
NPC2-201ENST00000238633 CNKSR1Q969H4 720 aa12.79□□□□□ -0.36
NPC2-201ENST00000238633 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
NPC2-201ENST00000238633 TBC1D2BQ9UPU7 963 aa12.79□□□□□ -0.36
NPC2-201ENST00000238633 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
NPC2-201ENST00000238633 TNRC18O15417 2968 aaPredicted RBP12.78□□□□□ -0.36
NPC2-201ENST00000238633 MAP1SQ66K74 1059 aaPredicted RBP12.78□□□□□ -0.36
NPC2-201ENST00000238633 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
NPC2-201ENST00000238633 CNTROBQ8N137 903 aa12.78□□□□□ -0.36
NPC2-201ENST00000238633 COL11A2P13942 1736 aaPredicted RBP12.78□□□□□ -0.36
NPC2-201ENST00000238633 A0A087WZG4 1122 aa12.77□□□□□ -0.37
NPC2-201ENST00000238633 CCDC85CA6NKD9 419 aa12.77□□□□□ -0.37
NPC2-201ENST00000238633 CAMTA2O94983 1202 aa12.77□□□□□ -0.37
NPC2-201ENST00000238633 EPHX2P34913 555 aa12.77□□□□□ -0.37
NPC2-201ENST00000238633 MLLT1Q03111 559 aaPredicted RBP12.77□□□□□ -0.37
NPC2-201ENST00000238633 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.37
NPC2-201ENST00000238633 PANK3Q9H999 370 aa12.77□□□□□ -0.37
NPC2-201ENST00000238633 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.37
NPC2-201ENST00000238633 HACL1Q9UJ83 578 aa12.77□□□□□ -0.37
NPC2-201ENST00000238633 DICER1Q9UPY3 1922 aaKnown RBP12.77□□□□□ -0.37
NPC2-201ENST00000238633 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
NPC2-201ENST00000238633 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
NPC2-201ENST00000238633 SLX4Q8IY92 1834 aa12.76□□□□□ -0.37
NPC2-201ENST00000238633 STARD3NLO95772 234 aa12.76□□□□□ -0.37
NPC2-201ENST00000238633 MAP2K1Q02750 393 aaPredicted RBP12.76□□□□□ -0.37
NPC2-201ENST00000238633 MTHFSDQ2M296 383 aaKnown RBP12.76□□□□□ -0.37
NPC2-201ENST00000238633 MASTLQ96GX5 879 aa12.76□□□□□ -0.37
NPC2-201ENST00000238633 ZNF496Q96IT1 587 aaPredicted RBP12.76□□□□□ -0.37
NPC2-201ENST00000238633 POLR3GLQ9BT43 218 aa12.76□□□□□ -0.37
NPC2-201ENST00000238633 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
NPC2-201ENST00000238633 SOGA3Q5TF21 947 aa12.75□□□□□ -0.37
NPC2-201ENST00000238633 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
NPC2-201ENST00000238633 ADAMTSL1Q8N6G6 1762 aa12.75□□□□□ -0.37
NPC2-201ENST00000238633 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
NPC2-201ENST00000238633 SETDB2Q96T68 719 aa12.75□□□□□ -0.37
NPC2-201ENST00000238633 RNF123Q5XPI4 1314 aa12.74□□□□□ -0.37
NPC2-201ENST00000238633 KLRG2A4D1S0 409 aaPredicted RBP12.74□□□□□ -0.37
NPC2-201ENST00000238633 FZD9O00144 591 aa12.74□□□□□ -0.37
NPC2-201ENST00000238633 A1BGP04217 495 aa12.74□□□□□ -0.37
NPC2-201ENST00000238633 HMOX1P09601 288 aa12.74□□□□□ -0.37
NPC2-201ENST00000238633 FKBP4Q02790 459 aaKnown RBP eCLIP12.74□□□□□ -0.37
NPC2-201ENST00000238633 DDX21Q9NR30 783 aaKnown RBP eCLIP12.74□□□□□ -0.37
NPC2-201ENST00000238633 IL6STP40189 918 aaPredicted RBP12.73□□□□□ -0.37
NPC2-201ENST00000238633 CCDC93Q567U6 631 aa12.73□□□□□ -0.37
NPC2-201ENST00000238633 PNMA8AQ86V59 439 aaPredicted RBP12.73□□□□□ -0.37
NPC2-201ENST00000238633 ABT1Q9ULW3 272 aaKnown RBP12.73□□□□□ -0.37
NPC2-201ENST00000238633 ZNF330Q9Y3S2 320 aaPredicted RBP12.73□□□□□ -0.37
NPC2-201ENST00000238633 ST5P78524 1137 aa12.72□□□□□ -0.37
NPC2-201ENST00000238633 CST9Q5W186 159 aa12.72□□□□□ -0.37
NPC2-201ENST00000238633 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
NPC2-201ENST00000238633 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
NPC2-201ENST00000238633 CAPNS2Q96L46 248 aa12.72□□□□□ -0.37
NPC2-201ENST00000238633 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
NPC2-201ENST00000238633 SCN4AP35499 1836 aa12.72□□□□□ -0.37
NPC2-201ENST00000238633 HEG1Q9ULI3 1381 aa12.71□□□□□ -0.37
NPC2-201ENST00000238633 NPR1P16066 1061 aa12.71□□□□□ -0.37
NPC2-201ENST00000238633 ZNF790Q6PG37 636 aa12.71□□□□□ -0.37
NPC2-201ENST00000238633 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
NPC2-201ENST00000238633 SNED1Q8TER0 1413 aa12.71□□□□□ -0.38
NPC2-201ENST00000238633 KCNQ3O43525 872 aa12.7□□□□□ -0.38
NPC2-201ENST00000238633 AOC2O75106 756 aa12.7□□□□□ -0.38
NPC2-201ENST00000238633 IARSP41252 1262 aaKnown RBP12.7□□□□□ -0.38
NPC2-201ENST00000238633 TTC5Q8N0Z6 440 aa12.7□□□□□ -0.38
NPC2-201ENST00000238633 GPC2Q8N158 579 aa12.7□□□□□ -0.38
NPC2-201ENST00000238633 SYNE4Q8N205 404 aa12.7□□□□□ -0.38
NPC2-201ENST00000238633 TEX13AQ9BXU3 409 aaPredicted RBP12.7□□□□□ -0.38
NPC2-201ENST00000238633 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
NPC2-201ENST00000238633 UBR2Q8IWV8 1755 aa12.69□□□□□ -0.38
NPC2-201ENST00000238633 TRAF5O00463 557 aa12.69□□□□□ -0.38
NPC2-201ENST00000238633 EPS15P42566 896 aa12.69□□□□□ -0.38
NPC2-201ENST00000238633 PIP4K2AP48426 406 aaPredicted RBP12.69□□□□□ -0.38
NPC2-201ENST00000238633 RTKN2Q8IZC4 609 aa12.69□□□□□ -0.38
NPC2-201ENST00000238633 MCOLN1Q9GZU1 580 aa12.69□□□□□ -0.38
NPC2-201ENST00000238633 COL4A5P29400 1685 aa12.69□□□□□ -0.38
NPC2-201ENST00000238633 NPHP1O15259 732 aa12.68□□□□□ -0.38
NPC2-201ENST00000238633 SLC51AQ86UW1 340 aa12.68□□□□□ -0.38
NPC2-201ENST00000238633 NBPF5PQ86XG9 351 aaPredicted RBP12.68□□□□□ -0.38
NPC2-201ENST00000238633 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
NPC2-201ENST00000238633 THSD7BQ9C0I4 1608 aa12.68□□□□□ -0.38
NPC2-201ENST00000238633 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
NPC2-201ENST00000238633 SCNN1DP51172 638 aa12.67□□□□□ -0.38
NPC2-201ENST00000238633 GRM1Q13255 1194 aa12.67□□□□□ -0.38
NPC2-201ENST00000238633 AMER1Q5JTC6 1135 aaPredicted RBP12.67□□□□□ -0.38
NPC2-201ENST00000238633 CLEC4GQ6UXB4 293 aa12.67□□□□□ -0.38
NPC2-201ENST00000238633 USP16Q9Y5T5 823 aa12.67□□□□□ -0.38
NPC2-201ENST00000238633 TLL2Q9Y6L7 1015 aa12.67□□□□□ -0.38
NPC2-201ENST00000238633 PDE4DIPQ5VU43 2346 aa12.67□□□□□ -0.38
NPC2-201ENST00000238633 LTBP1Q14766 1721 aa12.66□□□□□ -0.38
NPC2-201ENST00000238633 ECE1P42892 770 aa12.66□□□□□ -0.38
NPC2-201ENST00000238633 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
NPC2-201ENST00000238633 FMNL2Q96PY5 1086 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms