RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
NDUFB3-201ENST00000237889 SOX10P56693 466 aa13.34□□□□□ -0.27
NDUFB3-201ENST00000237889 ST5P78524 1137 aa13.34□□□□□ -0.27
NDUFB3-201ENST00000237889 CDCA8Q53HL2 280 aa13.34□□□□□ -0.27
NDUFB3-201ENST00000237889 DNAJC10Q8IXB1 793 aa13.34□□□□□ -0.27
NDUFB3-201ENST00000237889 RTKN2Q8IZC4 609 aa13.34□□□□□ -0.27
NDUFB3-201ENST00000237889 JDP2Q8WYK2 163 aa13.34□□□□□ -0.27
NDUFB3-201ENST00000237889 RNF123Q5XPI4 1314 aa13.34□□□□□ -0.27
NDUFB3-201ENST00000237889 COL15A1P39059 1388 aa13.33□□□□□ -0.27
NDUFB3-201ENST00000237889 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.28
NDUFB3-201ENST00000237889 FKBP4Q02790 459 aaKnown RBP eCLIP13.33□□□□□ -0.28
NDUFB3-201ENST00000237889 HHIPL1Q96JK4 782 aa13.33□□□□□ -0.28
NDUFB3-201ENST00000237889 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
NDUFB3-201ENST00000237889 TIAM2Q8IVF5 1701 aa13.33□□□□□ -0.28
NDUFB3-201ENST00000237889 AOC2O75106 756 aa13.32□□□□□ -0.28
NDUFB3-201ENST00000237889 STARD3NLO95772 234 aa13.32□□□□□ -0.28
NDUFB3-201ENST00000237889 SRGNP10124 158 aa13.32□□□□□ -0.28
NDUFB3-201ENST00000237889 EIF6P56537 245 aaKnown RBP13.32□□□□□ -0.28
NDUFB3-201ENST00000237889 CNBD1Q8NA66 436 aa13.32□□□□□ -0.28
NDUFB3-201ENST00000237889 SETDB2Q96T68 719 aa13.32□□□□□ -0.28
NDUFB3-201ENST00000237889 BCL2L12Q9HB09 334 aa13.32□□□□□ -0.28
NDUFB3-201ENST00000237889 FZD9O00144 591 aa13.31□□□□□ -0.28
NDUFB3-201ENST00000237889 CST9Q5W186 159 aa13.31□□□□□ -0.28
NDUFB3-201ENST00000237889 PRR5LQ6MZQ0 368 aa13.31□□□□□ -0.28
NDUFB3-201ENST00000237889 USP50Q70EL3 339 aaPredicted RBP13.31□□□□□ -0.28
NDUFB3-201ENST00000237889 TESK2Q96S53 571 aa13.31□□□□□ -0.28
NDUFB3-201ENST00000237889 ZNF277Q9NRM2 450 aaPredicted RBP13.31□□□□□ -0.28
NDUFB3-201ENST00000237889 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
NDUFB3-201ENST00000237889 VIRMAQ69YN4 1812 aaKnown RBP13.3□□□□□ -0.28
NDUFB3-201ENST00000237889 CANXP27824 592 aaKnown RBP13.3□□□□□ -0.28
NDUFB3-201ENST00000237889 NOGQ13253 232 aa13.3□□□□□ -0.28
NDUFB3-201ENST00000237889 EIF4A2Q14240 407 aaKnown RBP13.3□□□□□ -0.28
NDUFB3-201ENST00000237889 SAPCD2Q86UD0 394 aa13.3□□□□□ -0.28
NDUFB3-201ENST00000237889 ZBTB1Q9Y2K1 713 aa13.3□□□□□ -0.28
NDUFB3-201ENST00000237889 CARMIL3Q8ND23 1372 aa13.3□□□□□ -0.28
NDUFB3-201ENST00000237889 TBC1D9BQ66K14 1250 aa13.29□□□□□ -0.28
NDUFB3-201ENST00000237889 VSIG10Q8N0Z9 540 aa13.29□□□□□ -0.28
NDUFB3-201ENST00000237889 GJA3Q9Y6H8 435 aa13.29□□□□□ -0.28
NDUFB3-201ENST00000237889 SCN4AP35499 1836 aa13.28□□□□□ -0.28
NDUFB3-201ENST00000237889 CELF2O95319 508 aaKnown RBP13.28□□□□□ -0.28
NDUFB3-201ENST00000237889 NPR1P16066 1061 aa13.28□□□□□ -0.28
NDUFB3-201ENST00000237889 IARSP41252 1262 aaKnown RBP13.28□□□□□ -0.28
NDUFB3-201ENST00000237889 AKAP4Q5JQC9 854 aa13.28□□□□□ -0.28
NDUFB3-201ENST00000237889 CIAPIN1Q6FI81 312 aa13.28□□□□□ -0.28
NDUFB3-201ENST00000237889 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
NDUFB3-201ENST00000237889 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.28
NDUFB3-201ENST00000237889 CCDC24Q8N4L8 307 aa13.27□□□□□ -0.29
NDUFB3-201ENST00000237889 C7orf43Q8WVR3 580 aa13.27□□□□□ -0.29
NDUFB3-201ENST00000237889 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
NDUFB3-201ENST00000237889 TRAF5O00463 557 aa13.26□□□□□ -0.29
NDUFB3-201ENST00000237889 ALDH1B1P30837 517 aa13.26□□□□□ -0.29
NDUFB3-201ENST00000237889 EIF5P55010 431 aaKnown RBP13.26□□□□□ -0.29
NDUFB3-201ENST00000237889 SYNE4Q8N205 404 aa13.26□□□□□ -0.29
NDUFB3-201ENST00000237889 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
NDUFB3-201ENST00000237889 SLC52A2Q9HAB3 445 aa13.26□□□□□ -0.29
NDUFB3-201ENST00000237889 SAGE1Q9NXZ1 904 aa13.26□□□□□ -0.29
NDUFB3-201ENST00000237889 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
NDUFB3-201ENST00000237889 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
NDUFB3-201ENST00000237889 FMR1Q06787 632 aaKnown RBP eCLIP13.24□□□□□ -0.29
NDUFB3-201ENST00000237889 PKN2Q16513 984 aaKnown RBP13.24□□□□□ -0.29
NDUFB3-201ENST00000237889 GRIPAP1Q4V328 841 aa13.24□□□□□ -0.29
NDUFB3-201ENST00000237889 HABP4Q5JVS0 413 aaKnown RBP13.24□□□□□ -0.29
NDUFB3-201ENST00000237889 CC2D2BQ6DHV5 1058 aa13.24□□□□□ -0.29
NDUFB3-201ENST00000237889 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
NDUFB3-201ENST00000237889 EPS15P42566 896 aa13.23□□□□□ -0.29
NDUFB3-201ENST00000237889 CTU1Q7Z7A3 348 aaKnown RBP13.23□□□□□ -0.29
NDUFB3-201ENST00000237889 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
NDUFB3-201ENST00000237889 PSMD1Q99460 953 aa13.23□□□□□ -0.29
NDUFB3-201ENST00000237889 ADARB2Q9NS39 739 aaKnown RBP13.23□□□□□ -0.29
NDUFB3-201ENST00000237889 TBC1D2BQ9UPU7 963 aa13.23□□□□□ -0.29
NDUFB3-201ENST00000237889 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
NDUFB3-201ENST00000237889 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
NDUFB3-201ENST00000237889 CCDC102AQ96A19 550 aa13.22□□□□□ -0.29
NDUFB3-201ENST00000237889 CARD14Q9BXL6 1004 aa13.22□□□□□ -0.29
NDUFB3-201ENST00000237889 ZNF408Q9H9D4 720 aa13.22□□□□□ -0.29
NDUFB3-201ENST00000237889 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
NDUFB3-201ENST00000237889 CCDC88AQ3V6T2 1871 aa13.21□□□□□ -0.29
NDUFB3-201ENST00000237889 IL6STP40189 918 aaPredicted RBP13.21□□□□□ -0.29
NDUFB3-201ENST00000237889 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
NDUFB3-201ENST00000237889 SCNN1DP51172 638 aa13.21□□□□□ -0.29
NDUFB3-201ENST00000237889 CDC37L1Q7L3B6 337 aa13.21□□□□□ -0.29
NDUFB3-201ENST00000237889 LARGE2Q8N3Y3 721 aa13.21□□□□□ -0.29
NDUFB3-201ENST00000237889 ZC3H15Q8WU90 426 aaKnown RBP13.21□□□□□ -0.29
NDUFB3-201ENST00000237889 TMX4Q9H1E5 349 aaPredicted RBP13.21□□□□□ -0.29
NDUFB3-201ENST00000237889 DLEC1Q9Y238 1755 aa13.21□□□□□ -0.29
NDUFB3-201ENST00000237889 DICER1Q9UPY3 1922 aaKnown RBP13.2□□□□□ -0.3
NDUFB3-201ENST00000237889 HUNKP57058 714 aa13.2□□□□□ -0.3
NDUFB3-201ENST00000237889 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
NDUFB3-201ENST00000237889 FER1L6Q2WGJ9 1857 aa13.2□□□□□ -0.3
NDUFB3-201ENST00000237889 THSD7BQ9C0I4 1608 aa13.2□□□□□ -0.3
NDUFB3-201ENST00000237889 TRPA1O75762 1119 aa13.19□□□□□ -0.3
NDUFB3-201ENST00000237889 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
NDUFB3-201ENST00000237889 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
NDUFB3-201ENST00000237889 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
NDUFB3-201ENST00000237889 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
NDUFB3-201ENST00000237889 KLRG2A4D1S0 409 aaPredicted RBP13.18□□□□□ -0.3
NDUFB3-201ENST00000237889 NIM1KQ8IY84 436 aa13.18□□□□□ -0.3
NDUFB3-201ENST00000237889 GPRC5DQ9NZD1 345 aa13.18□□□□□ -0.3
NDUFB3-201ENST00000237889 HDAC9Q9UKV0 1011 aa13.18□□□□□ -0.3
NDUFB3-201ENST00000237889 HPS5Q9UPZ3 1129 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms