RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ADRA2BP18089 450 aa13.91□□□□□ -0.18
TNFAIP3-201ENST00000237289 TPTE2Q6XPS3 522 aa13.91□□□□□ -0.18
TNFAIP3-201ENST00000237289 USPL1Q5W0Q7 1092 aa13.9□□□□□ -0.18
TNFAIP3-201ENST00000237289 LINS1Q8NG48 757 aa13.9□□□□□ -0.18
TNFAIP3-201ENST00000237289 CRYBG1Q9Y4K1 1723 aa13.9□□□□□ -0.18
TNFAIP3-201ENST00000237289 GNAI2P04899 355 aa13.9□□□□□ -0.18
TNFAIP3-201ENST00000237289 NYXQ9GZU5 481 aa13.9□□□□□ -0.18
TNFAIP3-201ENST00000237289 RWDD1Q9H446 243 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP3-201ENST00000237289 GLI3P10071 1580 aa13.9□□□□□ -0.18
TNFAIP3-201ENST00000237289 MVPQ14764 893 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-201ENST00000237289 NLGN1Q8N2Q7 840 aa13.9□□□□□ -0.18
TNFAIP3-201ENST00000237289 ST5P78524 1137 aa13.89□□□□□ -0.19
TNFAIP3-201ENST00000237289 METTL22Q9BUU2 404 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP3-201ENST00000237289 MAP3K15Q6ZN16 1313 aa13.89□□□□□ -0.19
TNFAIP3-201ENST00000237289 PARP10Q53GL7 1025 aa13.89□□□□□ -0.19
TNFAIP3-201ENST00000237289 UTP14AQ9BVJ6 771 aaKnown RBP13.89□□□□□ -0.19
TNFAIP3-201ENST00000237289 ALDH1L1O75891 902 aa13.89□□□□□ -0.19
TNFAIP3-201ENST00000237289 SSFA2P28290 1259 aa13.89□□□□□ -0.19
TNFAIP3-201ENST00000237289 EXOC6Q8TAG9 804 aa13.89□□□□□ -0.19
TNFAIP3-201ENST00000237289 APBB1O00213 710 aa13.89□□□□□ -0.19
TNFAIP3-201ENST00000237289 CNTNAP4Q9C0A0 1308 aa13.88□□□□□ -0.19
TNFAIP3-201ENST00000237289 RGPD1P0DJD0 1748 aa13.88□□□□□ -0.19
TNFAIP3-201ENST00000237289 MSL1Q68DK7 614 aa13.88□□□□□ -0.19
TNFAIP3-201ENST00000237289 UBE3BQ7Z3V4 1068 aa13.88□□□□□ -0.19
TNFAIP3-201ENST00000237289 TCIRG1Q13488 830 aa13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 SLC15A2Q16348 729 aa13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 AAMPQ13685 434 aa13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 CWF19L2Q2TBE0 894 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 NBPF26B4DH59 902 aa13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 NBPF10Q6P3W6 841 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 NBPF15Q8N660 670 aa13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 COL15A1P39059 1388 aa13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 ERVV-1B6SEH8 477 aa13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 GIGYF2Q6Y7W6 1299 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 NARFQ9UHQ1 456 aa13.87□□□□□ -0.19
TNFAIP3-201ENST00000237289 SRP68Q9UHB9 627 aaKnown RBP13.86□□□□□ -0.19
TNFAIP3-201ENST00000237289 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
TNFAIP3-201ENST00000237289 CNBD1Q8NA66 436 aa13.86□□□□□ -0.19
TNFAIP3-201ENST00000237289 CCDC191Q8NCU4 936 aa13.86□□□□□ -0.19
TNFAIP3-201ENST00000237289 NRAPQ86VF7 1730 aa13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 EIF5P55010 431 aaKnown RBP13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 ERICH6BQ5W0A0 696 aa13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 CCDC85AQ96PX6 553 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 NLRP3Q96P20 1036 aa13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 GRM8O00222 908 aa13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 G3BP1Q13283 466 aaKnown RBP eCLIP13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 R3HDM1Q15032 1099 aaKnown RBP13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 C1orf115Q9H7X2 142 aa13.85□□□□□ -0.19
TNFAIP3-201ENST00000237289 CLEC4GQ6UXB4 293 aa13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 RPGRQ92834 1020 aaKnown RBP13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 UPF1Q92900 1129 aaKnown RBP eCLIP13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 G3V3G9 751 aa13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 DCAF8Q5TAQ9 597 aa13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 INTS5Q6P9B9 1019 aaKnown RBP13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 LRRC4BQ9NT99 713 aa13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 SH3TC1Q8TE82 1336 aa13.84□□□□□ -0.19
TNFAIP3-201ENST00000237289 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.83□□□□□ -0.19
TNFAIP3-201ENST00000237289 PSDA5PKW4 1024 aaPredicted RBP13.83□□□□□ -0.19
TNFAIP3-201ENST00000237289 MPHOSPH8Q99549 860 aa13.83□□□□□ -0.19
TNFAIP3-201ENST00000237289 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.2
TNFAIP3-201ENST00000237289 GORABQ5T7V8 394 aa13.83□□□□□ -0.2
TNFAIP3-201ENST00000237289 BRPF1P55201 1214 aaPredicted RBP13.83□□□□□ -0.2
TNFAIP3-201ENST00000237289 FAM89AQ96GI7 184 aa13.83□□□□□ -0.2
TNFAIP3-201ENST00000237289 IRS4O14654 1257 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 KCNJ4P48050 445 aa13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 HSP90AB4PQ58FF6 505 aa13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 ATF5Q9Y2D1 282 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 SRGAP3O43295 1099 aa13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 CAMKK2Q96RR4 588 aa13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 CNNM1Q9NRU3 951 aa13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 B4GALNT3Q6L9W6 998 aa13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 DDX46Q7L014 1031 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 TNNQ9UQP3 1299 aa13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 LRRFIP2Q9Y608 721 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-201ENST00000237289 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
TNFAIP3-201ENST00000237289 ZNF622Q969S3 477 aaKnown RBP eCLIP13.81□□□□□ -0.2
TNFAIP3-201ENST00000237289 GCKRQ14397 625 aa13.81□□□□□ -0.2
TNFAIP3-201ENST00000237289 HLFQ16534 295 aa13.81□□□□□ -0.2
TNFAIP3-201ENST00000237289 NEURL1BA8MQ27 555 aa13.81□□□□□ -0.2
TNFAIP3-201ENST00000237289 ZBTB7AO95365 584 aa13.81□□□□□ -0.2
TNFAIP3-201ENST00000237289 CCDC152Q4G0S7 254 aa13.81□□□□□ -0.2
TNFAIP3-201ENST00000237289 MEIS3Q99687 375 aa13.81□□□□□ -0.2
TNFAIP3-201ENST00000237289 SURF6O75683 361 aaKnown RBP13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 INTS3Q68E01 1043 aaKnown RBP13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 LRRC37A3O60309 1634 aa13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 PDIA6Q15084 440 aa13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 SERPINB2P05120 415 aa13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 MMP10P09238 476 aa13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 RPAP2Q8IXW5 612 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
TNFAIP3-201ENST00000237289 BEND3Q5T5X7 828 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms