RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 DYTNA2CJ06 578 aa9.93□□□□□ -0.82
SPARC-201ENST00000231061 ARMC3Q5W041 872 aa9.93□□□□□ -0.82
SPARC-201ENST00000231061 TRIM74Q86UV6 250 aa9.93□□□□□ -0.82
SPARC-201ENST00000231061 TRIM73Q86UV7 250 aa9.93□□□□□ -0.82
SPARC-201ENST00000231061 SSH1Q8WYL5 1049 aa9.93□□□□□ -0.82
SPARC-201ENST00000231061 SLC26A8Q96RN1 970 aa9.93□□□□□ -0.82
SPARC-201ENST00000231061 CHCHD3Q9NX63 227 aaKnown RBP9.93□□□□□ -0.82
SPARC-201ENST00000231061 RABL2AQ9UBK7 228 aaPredicted RBP9.93□□□□□ -0.82
SPARC-201ENST00000231061 PPLO60437 1756 aa9.93□□□□□ -0.82
SPARC-201ENST00000231061 RBM47A0AV96 593 aaKnown RBP9.93□□□□□ -0.82
SPARC-201ENST00000231061 HDGFL2Q7Z4V5 671 aaPredicted RBP9.93□□□□□ -0.82
SPARC-201ENST00000231061 FRMPD1Q5SYB0 1578 aa9.93□□□□□ -0.82
SPARC-201ENST00000231061 TRIM27P14373 513 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 PSMD2Q13200 908 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 DRC1Q96MC2 740 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 KIAA1522Q9P206 1035 aaPredicted RBP9.92□□□□□ -0.82
SPARC-201ENST00000231061 MLH3Q9UHC1 1453 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 TULP2O00295 520 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 EXOC5O00471 708 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 CASQ1P31415 396 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.92□□□□□ -0.82
SPARC-201ENST00000231061 ERCC4Q92889 916 aaPredicted RBP9.92□□□□□ -0.82
SPARC-201ENST00000231061 MED4Q9NPJ6 270 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 NOB1Q9ULX3 412 aaKnown RBP9.92□□□□□ -0.82
SPARC-201ENST00000231061 G3BP2Q9UN86 482 aaKnown RBP9.92□□□□□ -0.82
SPARC-201ENST00000231061 HECW2Q9P2P5 1572 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 DIAPH1O60610 1272 aaKnown RBP9.92□□□□□ -0.82
SPARC-201ENST00000231061 XBP1P17861 261 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 CA8P35219 290 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 SART3Q15020 963 aaKnown RBP9.92□□□□□ -0.82
SPARC-201ENST00000231061 CC2D1AQ6P1N0 951 aaPredicted RBP9.92□□□□□ -0.82
SPARC-201ENST00000231061 NEUROD6Q96NK8 337 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 FBXO9Q9UK97 447 aaPredicted RBP9.92□□□□□ -0.82
SPARC-201ENST00000231061 DDX19BQ9UMR2 479 aa9.92□□□□□ -0.82
SPARC-201ENST00000231061 CCP110O43303 1012 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 FAM200BP0CF97 657 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 NOP2P46087 812 aaKnown RBP9.91□□□□□ -0.82
SPARC-201ENST00000231061 TBC1D32Q96NH3 1257 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 FAM163BP0C2L3 166 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 ATF7IPQ6VMQ6 1270 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 CENPOQ9BU64 300 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 UBA5Q9GZZ9 404 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 ZC3H13Q5T200 1668 aaKnown RBP9.91□□□□□ -0.82
SPARC-201ENST00000231061 GUCY2CP25092 1073 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 IFT88Q13099 833 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.91□□□□□ -0.82
SPARC-201ENST00000231061 CCDC85AQ96PX6 553 aaPredicted RBP9.91□□□□□ -0.82
SPARC-201ENST00000231061 TRIM35Q9UPQ4 493 aa9.91□□□□□ -0.82
SPARC-201ENST00000231061 FYB1O15117 783 aa9.9□□□□□ -0.82
SPARC-201ENST00000231061 XRCC6P12956 609 aaKnown RBP eCLIP9.9□□□□□ -0.82
SPARC-201ENST00000231061 TMEM57Q8N5G2 664 aa9.9□□□□□ -0.82
SPARC-201ENST00000231061 TBC1D2Q9BYX2 928 aa9.9□□□□□ -0.82
SPARC-201ENST00000231061 ABCC11Q96J66 1382 aa9.9□□□□□ -0.82
SPARC-201ENST00000231061 CD151P48509 253 aa9.9□□□□□ -0.82
SPARC-201ENST00000231061 CACTIN-AS1Q8N1I8 211 aa9.9□□□□□ -0.82
SPARC-201ENST00000231061 V9GYY5 206 aaPredicted RBP9.9□□□□□ -0.82
SPARC-201ENST00000231061 ATAD2Q6PL18 1390 aa9.9□□□□□ -0.83
SPARC-201ENST00000231061 SYNPO2Q9UMS6 1093 aa9.9□□□□□ -0.83
SPARC-201ENST00000231061 ITM2BQ9Y287 266 aa9.9□□□□□ -0.83
SPARC-201ENST00000231061 ATP2B3Q16720 1220 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 ENOX1Q8TC92 643 aaKnown RBP9.89□□□□□ -0.83
SPARC-201ENST00000231061 CABP1Q9NZU7 370 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 CCDC194A0A1B0GVG4 234 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 CFAP69A5D8W1 941 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 FBLN1P23142 703 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 RRM1P23921 792 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 PDILTQ8N807 584 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 PLEKHF1Q96S99 279 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 CDK19Q9BWU1 502 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 CALCOCO1Q9P1Z2 691 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 ZSCAN26Q16670 478 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 HS6ST3Q8IZP7 471 aa9.89□□□□□ -0.83
SPARC-201ENST00000231061 CFAP74Q9C0B2 1584 aa9.88□□□□□ -0.83
SPARC-201ENST00000231061 CAMSAP1Q5T5Y3 1602 aa9.88□□□□□ -0.83
SPARC-201ENST00000231061 USP32Q8NFA0 1604 aa9.88□□□□□ -0.83
SPARC-201ENST00000231061 AMOTL1Q8IY63 956 aa9.88□□□□□ -0.83
SPARC-201ENST00000231061 NEXMIFQ5QGS0 1516 aa9.88□□□□□ -0.83
SPARC-201ENST00000231061 DYNC1I1O14576 645 aa9.88□□□□□ -0.83
SPARC-201ENST00000231061 HMOX1P09601 288 aa9.88□□□□□ -0.83
SPARC-201ENST00000231061 PRKAR2BP31323 418 aa9.88□□□□□ -0.83
SPARC-201ENST00000231061 FBXO31Q5XUX0 539 aaPredicted RBP9.88□□□□□ -0.83
SPARC-201ENST00000231061 SAPCD2Q86UD0 394 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 THOC1Q96FV9 657 aaKnown RBP9.87□□□□□ -0.83
SPARC-201ENST00000231061 KIF2CQ99661 725 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 LNPKQ9C0E8 428 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 FOXD4L1Q9NU39 408 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 ARHGEF28Q8N1W1 1705 aaKnown RBP9.87□□□□□ -0.83
SPARC-201ENST00000231061 NLRP1Q9C000 1473 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 GOLGA6L6A8MZA4 724 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.87□□□□□ -0.83
SPARC-201ENST00000231061 ELL2O00472 640 aaPredicted RBP9.87□□□□□ -0.83
SPARC-201ENST00000231061 OFD1O75665 1012 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 NFXL1Q6ZNB6 911 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 CLASRPQ8N2M8 674 aaKnown RBP9.87□□□□□ -0.83
SPARC-201ENST00000231061 CCDC34Q96HJ3 373 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 IGSF5Q9NSI5 407 aa9.87□□□□□ -0.83
SPARC-201ENST00000231061 SHTN1A0MZ66 631 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 TMCO5BA8MYB1 307 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 SLC7A5Q01650 507 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 TAX1BP1Q86VP1 789 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms