RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 EYA1Q99502 592 aa15.05■□□□□ -0
PITRM1-201ENST00000224949 TMEM131LA2VDJ0 1609 aa15.05■□□□□ -0
PITRM1-201ENST00000224949 CDC37L1Q7L3B6 337 aa15.05■□□□□ -0
PITRM1-201ENST00000224949 TTC6Q86TZ1 520 aa15.05■□□□□ -0
PITRM1-201ENST00000224949 ESF1Q9H501 851 aaKnown RBP15.05■□□□□ -0
PITRM1-201ENST00000224949 HYPKQ9NX55 129 aa15.05■□□□□ -0
PITRM1-201ENST00000224949 RAB11FIP3O75154 756 aa15.04■□□□□ -0
PITRM1-201ENST00000224949 ZKSCAN1P17029 563 aaPredicted RBP15.04■□□□□ -0
PITRM1-201ENST00000224949 GTF2F1P35269 517 aaKnown RBP eCLIP15.04■□□□□ -0
PITRM1-201ENST00000224949 TAF7Q15545 349 aaPredicted RBP15.04■□□□□ -0
PITRM1-201ENST00000224949 ME3Q16798 604 aa15.04■□□□□ -0
PITRM1-201ENST00000224949 TPD52L1Q16890 204 aaPredicted RBP15.04■□□□□ -0
PITRM1-201ENST00000224949 FAM200AQ8TCP9 573 aa15.04■□□□□ -0
PITRM1-201ENST00000224949 NGDNQ8NEJ9 315 aaKnown RBP15.04■□□□□ -0
PITRM1-201ENST00000224949 TNNT1P13805 278 aa15.04■□□□□ -0
PITRM1-201ENST00000224949 RUFY2Q8WXA3 655 aa15.04■□□□□ -0
PITRM1-201ENST00000224949 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.04■□□□□ -0
PITRM1-201ENST00000224949 V9GYY5 206 aaPredicted RBP15.04■□□□□ -0
PITRM1-201ENST00000224949 PA2G4Q9UQ80 394 aaKnown RBP15.03■□□□□ -0
PITRM1-201ENST00000224949 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
PITRM1-201ENST00000224949 IFIT2P09913 472 aaKnown RBP15.03■□□□□ -0
PITRM1-201ENST00000224949 CLASRPQ8N2M8 674 aaKnown RBP15.03■□□□□ -0
PITRM1-201ENST00000224949 SPATA32Q96LK8 384 aa15.03■□□□□ -0
PITRM1-201ENST00000224949 FUCA2Q9BTY2 467 aa15.03■□□□□ -0
PITRM1-201ENST00000224949 NPHP1O15259 732 aa15.02■□□□□ -0
PITRM1-201ENST00000224949 TPM3P06753 285 aa15.02■□□□□ -0
PITRM1-201ENST00000224949 SSH3Q8TE77 659 aa15.02■□□□□ -0
PITRM1-201ENST00000224949 PI4KAP2A4QPH2 592 aa15.02□□□□□ -0.01
PITRM1-201ENST00000224949 PI4KAP1Q8N8J0 262 aa15.02□□□□□ -0.01
PITRM1-201ENST00000224949 DNAJC25Q9H1X3 360 aa15.02□□□□□ -0.01
PITRM1-201ENST00000224949 CBX8Q9HC52 389 aa15.02□□□□□ -0.01
PITRM1-201ENST00000224949 MRVI1Q9Y6F6 885 aa15.02□□□□□ -0.01
PITRM1-201ENST00000224949 DIP2CQ9Y2E4 1556 aa15.01□□□□□ -0.01
PITRM1-201ENST00000224949 COL9A3Q14050 684 aaPredicted RBP15.01□□□□□ -0.01
PITRM1-201ENST00000224949 TPCN1Q9ULQ1 816 aa15.01□□□□□ -0.01
PITRM1-201ENST00000224949 PPFIA3O75145 1194 aa15.01□□□□□ -0.01
PITRM1-201ENST00000224949 RBM8AQ9Y5S9 174 aaKnown RBP15.01□□□□□ -0.01
PITRM1-201ENST00000224949 GLRX3O76003 335 aaKnown RBP15□□□□□ -0.01
PITRM1-201ENST00000224949 UTP14CQ5TAP6 766 aaKnown RBP15□□□□□ -0.01
PITRM1-201ENST00000224949 CCDC112Q8NEF3 446 aa15□□□□□ -0.01
PITRM1-201ENST00000224949 DDX11Q96FC9 970 aa15□□□□□ -0.01
PITRM1-201ENST00000224949 FAM227BQ96M60 508 aa15□□□□□ -0.01
PITRM1-201ENST00000224949 CLIP2Q9UDT6 1046 aa15□□□□□ -0.01
PITRM1-201ENST00000224949 AACSQ86V21 672 aa15□□□□□ -0.01
PITRM1-201ENST00000224949 C9orf78Q9NZ63 289 aaPredicted RBP15□□□□□ -0.01
PITRM1-201ENST00000224949 ZNF165P49910 485 aa15□□□□□ -0.01
PITRM1-201ENST00000224949 ZSCAN31Q96LW9 406 aaPredicted RBP15□□□□□ -0.01
PITRM1-201ENST00000224949 SIL1Q9H173 461 aa15□□□□□ -0.01
PITRM1-201ENST00000224949 CHPF2Q9P2E5 772 aa15□□□□□ -0.01
PITRM1-201ENST00000224949 NAP1L2Q9ULW6 460 aaPredicted RBP15□□□□□ -0.01
PITRM1-201ENST00000224949 NLRP6P59044 892 aa14.99□□□□□ -0.01
PITRM1-201ENST00000224949 GTPBP4Q9BZE4 634 aaKnown RBP14.99□□□□□ -0.01
PITRM1-201ENST00000224949 CCDC8Q9H0W5 538 aaPredicted RBP14.99□□□□□ -0.01
PITRM1-201ENST00000224949 SH2B1Q9NRF2 756 aaPredicted RBP14.99□□□□□ -0.01
PITRM1-201ENST00000224949 PREX1Q8TCU6 1659 aa14.99□□□□□ -0.01
PITRM1-201ENST00000224949 HSP90B1P14625 803 aaKnown RBP14.99□□□□□ -0.01
PITRM1-201ENST00000224949 VPS53Q5VIR6 699 aa14.99□□□□□ -0.01
PITRM1-201ENST00000224949 FILIP1Q7Z7B0 1213 aa14.99□□□□□ -0.01
PITRM1-201ENST00000224949 IL17REQ8NFR9 667 aa14.99□□□□□ -0.01
PITRM1-201ENST00000224949 TRMT1Q9NXH9 659 aaKnown RBP14.99□□□□□ -0.01
PITRM1-201ENST00000224949 AOX1Q06278 1338 aa14.99□□□□□ -0.01
PITRM1-201ENST00000224949 A0A087WWV3 80 aa14.98□□□□□ -0.01
PITRM1-201ENST00000224949 GOLGA6L19H0YKK7 550 aa14.98□□□□□ -0.01
PITRM1-201ENST00000224949 NCBP1Q09161 790 aaKnown RBP14.98□□□□□ -0.01
PITRM1-201ENST00000224949 LARP1Q6PKG0 1096 aaKnown RBP14.98□□□□□ -0.01
PITRM1-201ENST00000224949 GPATCH3Q96I76 525 aa14.98□□□□□ -0.01
PITRM1-201ENST00000224949 TAOK2Q9UL54 1235 aa14.98□□□□□ -0.01
PITRM1-201ENST00000224949 CCDC9Q9Y3X0 531 aaKnown RBP14.98□□□□□ -0.01
PITRM1-201ENST00000224949 FGD1P98174 961 aa14.98□□□□□ -0.01
PITRM1-201ENST00000224949 SLC26A8Q96RN1 970 aa14.98□□□□□ -0.01
PITRM1-201ENST00000224949 ST3GAL1Q11201 340 aa14.98□□□□□ -0.01
PITRM1-201ENST00000224949 BLOC1S2Q6QNY1 142 aa14.98□□□□□ -0.01
PITRM1-201ENST00000224949 CREB3L3Q68CJ9 461 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 FSD1Q9BTV5 496 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 BOLA2Q9H3K6 86 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 RIMS1Q86UR5 1692 aaKnown RBP14.97□□□□□ -0.01
PITRM1-201ENST00000224949 H3BQV1 296 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 NR1I2O75469 434 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 IFFO2Q5TF58 517 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 ZSCAN25Q6NSZ9 544 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 ECHDC1Q9NTX5 307 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 CGNQ9P2M7 1197 aaKnown RBP14.97□□□□□ -0.01
PITRM1-201ENST00000224949 ARID5BQ14865 1188 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 DNAAF4Q8WXU2 420 aa14.97□□□□□ -0.01
PITRM1-201ENST00000224949 NMIQ13287 307 aaPredicted RBP14.96□□□□□ -0.01
PITRM1-201ENST00000224949 CCDC171Q6TFL3 1326 aa14.96□□□□□ -0.01
PITRM1-201ENST00000224949 ZNF75DP51815 510 aa14.96□□□□□ -0.01
PITRM1-201ENST00000224949 HSP90AB4PQ58FF6 505 aa14.96□□□□□ -0.01
PITRM1-201ENST00000224949 ZSWIM6Q9HCJ5 1215 aa14.96□□□□□ -0.01
PITRM1-201ENST00000224949 CACTINQ8WUQ7 758 aaKnown RBP14.96□□□□□ -0.02
PITRM1-201ENST00000224949 PPP6R1Q9UPN7 881 aa14.96□□□□□ -0.02
PITRM1-201ENST00000224949 BECN2A8MW95 431 aa14.95□□□□□ -0.02
PITRM1-201ENST00000224949 PDCP20941 246 aa14.95□□□□□ -0.02
PITRM1-201ENST00000224949 ANKRD7Q92527 254 aa14.95□□□□□ -0.02
PITRM1-201ENST00000224949 TAF6LQ9Y6J9 622 aa14.95□□□□□ -0.02
PITRM1-201ENST00000224949 DLC1Q96QB1 1528 aa14.95□□□□□ -0.02
PITRM1-201ENST00000224949 JAK2O60674 1132 aa14.95□□□□□ -0.02
PITRM1-201ENST00000224949 AIMP1Q12904 312 aaKnown RBP14.95□□□□□ -0.02
PITRM1-201ENST00000224949 ERCC4Q92889 916 aaPredicted RBP14.95□□□□□ -0.02
PITRM1-201ENST00000224949 LRRC2Q9BYS8 371 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms