RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 STK31Q9BXU1 1019 aa30.37■■■□□ 2.45
HOMER3-201ENST00000221222 DZIP3Q86Y13 1208 aaKnown RBP30.36■■■□□ 2.45
HOMER3-201ENST00000221222 ZNF428Q96B54 188 aa30.36■■■□□ 2.45
HOMER3-201ENST00000221222 SRP68Q9UHB9 627 aaKnown RBP30.36■■■□□ 2.45
HOMER3-201ENST00000221222 CHD4Q14839 1912 aa30.35■■■□□ 2.45
HOMER3-201ENST00000221222 ZPR1O75312 459 aa30.35■■■□□ 2.45
HOMER3-201ENST00000221222 TBC1D2BQ9UPU7 963 aa30.35■■■□□ 2.45
HOMER3-201ENST00000221222 CAMTA2O94983 1202 aa30.33■■■□□ 2.45
HOMER3-201ENST00000221222 GYS1P13807 737 aa30.33■■■□□ 2.45
HOMER3-201ENST00000221222 USPL1Q5W0Q7 1092 aa30.33■■■□□ 2.45
HOMER3-201ENST00000221222 RGL2O15211 777 aa30.32■■■□□ 2.44
HOMER3-201ENST00000221222 TTLL7Q6ZT98 887 aa30.32■■■□□ 2.44
HOMER3-201ENST00000221222 TCERG1O14776 1098 aaKnown RBP30.31■■■□□ 2.44
HOMER3-201ENST00000221222 COPS6Q7L5N1 327 aa30.31■■■□□ 2.44
HOMER3-201ENST00000221222 XAGE3Q8WTP9 111 aa30.31■■■□□ 2.44
HOMER3-201ENST00000221222 BCL2L12Q9HB09 334 aa30.31■■■□□ 2.44
HOMER3-201ENST00000221222 UTRNP46939 3433 aa30.31■■■□□ 2.44
HOMER3-201ENST00000221222 SLC4A2P04920 1241 aa30.3■■■□□ 2.44
HOMER3-201ENST00000221222 MAP3K15Q6ZN16 1313 aa30.3■■■□□ 2.44
HOMER3-201ENST00000221222 ERVV-1B6SEH8 477 aa30.29■■■□□ 2.44
HOMER3-201ENST00000221222 KIF6Q6ZMV9 814 aa30.29■■■□□ 2.44
HOMER3-201ENST00000221222 NLGN1Q8N2Q7 840 aa30.29■■■□□ 2.44
HOMER3-201ENST00000221222 PHAXQ9H814 394 aaKnown RBP30.29■■■□□ 2.44
HOMER3-201ENST00000221222 NUP98P52948 1817 aa30.29■■■□□ 2.44
HOMER3-201ENST00000221222 AIMP1Q12904 312 aaKnown RBP30.28■■■□□ 2.44
HOMER3-201ENST00000221222 ALDH1L2Q3SY69 923 aa30.28■■■□□ 2.44
HOMER3-201ENST00000221222 CLEC4GQ6UXB4 293 aa30.28■■■□□ 2.44
HOMER3-201ENST00000221222 FKBP8Q14318 412 aa30.27■■■□□ 2.44
HOMER3-201ENST00000221222 ZNF784Q8NCA9 323 aaPredicted RBP30.27■■■□□ 2.44
HOMER3-201ENST00000221222 ZNF652Q9Y2D9 606 aa30.26■■■□□ 2.43
HOMER3-201ENST00000221222 SSH1Q8WYL5 1049 aa30.25■■■□□ 2.43
HOMER3-201ENST00000221222 ARFGEF2Q9Y6D5 1785 aa30.25■■■□□ 2.43
HOMER3-201ENST00000221222 G2E3Q7L622 706 aa30.24■■■□□ 2.43
HOMER3-201ENST00000221222 ZBTB3Q9H5J0 574 aa30.24■■■□□ 2.43
HOMER3-201ENST00000221222 FLIIQ13045 1269 aa30.23■■■□□ 2.43
HOMER3-201ENST00000221222 HLFQ16534 295 aa30.23■■■□□ 2.43
HOMER3-201ENST00000221222 ANKRD13DQ6ZTN6 518 aa30.23■■■□□ 2.43
HOMER3-201ENST00000221222 MRPL50Q8N5N7 158 aaKnown RBP30.23■■■□□ 2.43
HOMER3-201ENST00000221222 PLBD2Q8NHP8 589 aa30.23■■■□□ 2.43
HOMER3-201ENST00000221222 RARSP54136 660 aaKnown RBP30.22■■■□□ 2.43
HOMER3-201ENST00000221222 GIGYF2Q6Y7W6 1299 aaKnown RBP30.22■■■□□ 2.43
HOMER3-201ENST00000221222 ANKRD36CQ5JPF3 1778 aa30.22■■■□□ 2.43
HOMER3-201ENST00000221222 TM4SF1P30408 202 aa30.21■■■□□ 2.43
HOMER3-201ENST00000221222 ATP10DQ9P241 1426 aa30.21■■■□□ 2.43
HOMER3-201ENST00000221222 DDX58O95786 925 aaKnown RBP30.2■■■□□ 2.43
HOMER3-201ENST00000221222 YBX3P16989 372 aaKnown RBP eCLIP30.19■■■□□ 2.42
HOMER3-201ENST00000221222 BRPF1P55201 1214 aaPredicted RBP30.19■■■□□ 2.42
HOMER3-201ENST00000221222 NFIXQ14938 502 aa30.19■■■□□ 2.42
HOMER3-201ENST00000221222 TBC1D9BQ66K14 1250 aa30.19■■■□□ 2.42
HOMER3-201ENST00000221222 SMC4Q9NTJ3 1288 aa30.19■■■□□ 2.42
HOMER3-201ENST00000221222 MMP10P09238 476 aa30.18■■■□□ 2.42
HOMER3-201ENST00000221222 KSR2Q6VAB6 950 aa30.17■■■□□ 2.42
HOMER3-201ENST00000221222 BCL2L13Q9BXK5 485 aa30.17■■■□□ 2.42
HOMER3-201ENST00000221222 HSP90AB3PQ58FF7 597 aa30.16■■■□□ 2.42
HOMER3-201ENST00000221222 RIC3Q7Z5B4 369 aa30.16■■■□□ 2.42
HOMER3-201ENST00000221222 NRXN2Q9P2S2 1712 aa30.16■■■□□ 2.42
HOMER3-201ENST00000221222 ADCY9O60503 1353 aa30.16■■■□□ 2.42
HOMER3-201ENST00000221222 DDR1Q08345 913 aa30.15■■■□□ 2.42
HOMER3-201ENST00000221222 FKBP5Q13451 457 aaPredicted RBP30.15■■■□□ 2.42
HOMER3-201ENST00000221222 GOLGB1Q14789 3259 aaKnown RBP30.15■■■□□ 2.42
HOMER3-201ENST00000221222 AFDNP55196 1824 aaKnown RBP30.15■■■□□ 2.42
HOMER3-201ENST00000221222 CARMIL3Q8ND23 1372 aa30.15■■■□□ 2.42
HOMER3-201ENST00000221222 PI4KAP2A4QPH2 592 aa30.15■■■□□ 2.42
HOMER3-201ENST00000221222 POLRMTO00411 1230 aaKnown RBP30.15■■■□□ 2.42
HOMER3-201ENST00000221222 ZNF34Q8IZ26 560 aa30.15■■■□□ 2.42
HOMER3-201ENST00000221222 PI4KAP1Q8N8J0 262 aa30.15■■■□□ 2.42
HOMER3-201ENST00000221222 SETDB2Q96T68 719 aa30.15■■■□□ 2.42
HOMER3-201ENST00000221222 CD2APQ9Y5K6 639 aa30.15■■■□□ 2.42
HOMER3-201ENST00000221222 TCIRG1Q13488 830 aa30.14■■■□□ 2.41
HOMER3-201ENST00000221222 NIP7Q9Y221 180 aaKnown RBP eCLIP30.14■■■□□ 2.41
HOMER3-201ENST00000221222 PARP3Q9Y6F1 533 aa30.14■■■□□ 2.41
HOMER3-201ENST00000221222 PTPRCP08575 1304 aa30.13■■■□□ 2.41
HOMER3-201ENST00000221222 BICDL1Q6ZP65 573 aa30.13■■■□□ 2.41
HOMER3-201ENST00000221222 WWC3Q9ULE0 1092 aa30.13■■■□□ 2.41
HOMER3-201ENST00000221222 MAP3K2Q9Y2U5 619 aa30.13■■■□□ 2.41
HOMER3-201ENST00000221222 METTL22Q9BUU2 404 aaPredicted RBP30.11■■■□□ 2.41
HOMER3-201ENST00000221222 UBN2Q6ZU65 1347 aa30.1■■■□□ 2.41
HOMER3-201ENST00000221222 KIF16BQ96L93 1317 aa30.1■■■□□ 2.41
HOMER3-201ENST00000221222 GRIN3BO60391 1043 aa30.09■■■□□ 2.41
HOMER3-201ENST00000221222 GPTP24298 496 aa30.09■■■□□ 2.41
HOMER3-201ENST00000221222 DNAAF4Q8WXU2 420 aa30.09■■■□□ 2.41
HOMER3-201ENST00000221222 ISCA1Q9BUE6 129 aa30.09■■■□□ 2.41
HOMER3-201ENST00000221222 BCAR3O75815 825 aa30.08■■■□□ 2.41
HOMER3-201ENST00000221222 SERPINB2P05120 415 aa30.08■■■□□ 2.41
HOMER3-201ENST00000221222 TRIM28Q13263 835 aaKnown RBP30.08■■■□□ 2.41
HOMER3-201ENST00000221222 PARP10Q53GL7 1025 aa30.08■■■□□ 2.41
HOMER3-201ENST00000221222 NOB1Q9ULX3 412 aaKnown RBP30.07■■■□□ 2.4
HOMER3-201ENST00000221222 IBTKQ9P2D0 1353 aaPredicted RBP30.07■■■□□ 2.4
HOMER3-201ENST00000221222 KIF13BQ9NQT8 1826 aa30.07■■■□□ 2.4
HOMER3-201ENST00000221222 MYD88Q99836 296 aa30.06■■■□□ 2.4
HOMER3-201ENST00000221222 NLRP10Q86W26 655 aa30.05■■■□□ 2.4
HOMER3-201ENST00000221222 ARHGAP45Q92619 1136 aa30.05■■■□□ 2.4
HOMER3-201ENST00000221222 RCAN3Q9UKA8 241 aa30.05■■■□□ 2.4
HOMER3-201ENST00000221222 F6X3S4 739 aa30.04■■■□□ 2.4
HOMER3-201ENST00000221222 ATP5J2-PTCD1G3V325 749 aa30.04■■■□□ 2.4
HOMER3-201ENST00000221222 NEXNQ0ZGT2 675 aa30.04■■■□□ 2.4
HOMER3-201ENST00000221222 SUSD4Q5VX71 490 aa30.03■■■□□ 2.4
HOMER3-201ENST00000221222 NBPF5PQ86XG9 351 aaPredicted RBP30.03■■■□□ 2.4
HOMER3-201ENST00000221222 C10orf71Q711Q0 1435 aa30.03■■■□□ 2.4
HOMER3-201ENST00000221222 N4BP2Q86UW6 1770 aaPredicted RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms