RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 BIN1O00499 593 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 YEATS4O95619 227 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 SHTN1A0MZ66 631 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 CBX1P83916 185 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 CCDC91Q7Z6B0 441 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 ABCC5O15440 1437 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 PHF8Q9UPP1 1060 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 PRKCSHP14314 528 aaPredicted RBP20.66■□□□□ 0.9
EXTL3-201ENST00000220562 TDRD12Q587J7 1177 aaKnown RBP20.66■□□□□ 0.9
EXTL3-201ENST00000220562 TSHZ3Q63HK5 1081 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 TMC6Q7Z403 805 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 TFIP11Q9UBB9 837 aaKnown RBP20.66■□□□□ 0.9
EXTL3-201ENST00000220562 STX1AQ16623 288 aa20.66■□□□□ 0.9
EXTL3-201ENST00000220562 TNNT1P13805 278 aa20.65■□□□□ 0.9
EXTL3-201ENST00000220562 DDX19AQ9NUU7 478 aaKnown RBP20.65■□□□□ 0.9
EXTL3-201ENST00000220562 STX6O43752 255 aa20.65■□□□□ 0.9
EXTL3-201ENST00000220562 USO1O60763 962 aaKnown RBP20.65■□□□□ 0.9
EXTL3-201ENST00000220562 MCM3P25205 808 aa20.65■□□□□ 0.9
EXTL3-201ENST00000220562 TMEM67Q5HYA8 995 aa20.65■□□□□ 0.9
EXTL3-201ENST00000220562 CTNNBL1Q8WYA6 563 aaPredicted RBP20.65■□□□□ 0.9
EXTL3-201ENST00000220562 USP8P40818 1118 aa20.64■□□□□ 0.9
EXTL3-201ENST00000220562 ANAPC15P60006 121 aa20.64■□□□□ 0.9
EXTL3-201ENST00000220562 ECHDC1Q9NTX5 307 aa20.64■□□□□ 0.9
EXTL3-201ENST00000220562 AMOTL2Q9Y2J4 779 aa20.64■□□□□ 0.9
EXTL3-201ENST00000220562 IFFO1Q0D2I5 559 aa20.64■□□□□ 0.89
EXTL3-201ENST00000220562 SLC4A8Q2Y0W8 1093 aa20.64■□□□□ 0.89
EXTL3-201ENST00000220562 RAB11FIP4Q86YS3 637 aa20.64■□□□□ 0.89
EXTL3-201ENST00000220562 DNAI2Q9GZS0 605 aa20.64■□□□□ 0.89
EXTL3-201ENST00000220562 TTF1Q15361 905 aaPredicted RBP20.64■□□□□ 0.89
EXTL3-201ENST00000220562 MBIPQ9NS73 344 aa20.64■□□□□ 0.89
EXTL3-201ENST00000220562 BCCIPQ9P287 314 aaKnown RBP eCLIP20.64■□□□□ 0.89
EXTL3-201ENST00000220562 ADAMTS2O95450 1211 aa20.64■□□□□ 0.89
EXTL3-201ENST00000220562 RBM27Q9P2N5 1060 aaKnown RBP20.64■□□□□ 0.89
EXTL3-201ENST00000220562 KIAA0586Q9BVV6 1533 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 LIG1P18858 919 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 USP16Q9Y5T5 823 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 MTIF2P46199 727 aaKnown RBP20.63■□□□□ 0.89
EXTL3-201ENST00000220562 SLF2Q8IX21 1173 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 EHMT1Q9H9B1 1298 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 ADGRL1O94910 1474 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 BAG4O95429 457 aaKnown RBP20.63■□□□□ 0.89
EXTL3-201ENST00000220562 HAND2P61296 217 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 PKNOX2Q96KN3 472 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 C16orf45Q96MC5 204 aaPredicted RBP20.63■□□□□ 0.89
EXTL3-201ENST00000220562 CGNQ9P2M7 1197 aaKnown RBP20.63■□□□□ 0.89
EXTL3-201ENST00000220562 ZNF219Q9P2Y4 722 aaPredicted RBP20.63■□□□□ 0.89
EXTL3-201ENST00000220562 TTC22Q5TAA0 569 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 ISM2Q6H9L7 571 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 CCDC150Q8NCX0 1101 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 CD109Q6YHK3 1445 aa20.63■□□□□ 0.89
EXTL3-201ENST00000220562 ATP5J2-PTCD1G3V325 749 aa20.62■□□□□ 0.89
EXTL3-201ENST00000220562 FAM83GA6ND36 823 aa20.62■□□□□ 0.89
EXTL3-201ENST00000220562 CWC25Q9NXE8 425 aaPredicted RBP20.62■□□□□ 0.89
EXTL3-201ENST00000220562 ADCY5O95622 1261 aa20.62■□□□□ 0.89
EXTL3-201ENST00000220562 PRDM10Q9NQV6 1147 aa20.62■□□□□ 0.89
EXTL3-201ENST00000220562 SNRKQ9NRH2 765 aa20.62■□□□□ 0.89
EXTL3-201ENST00000220562 PPFIA3O75145 1194 aa20.62■□□□□ 0.89
EXTL3-201ENST00000220562 CALML4Q96GE6 196 aa20.62■□□□□ 0.89
EXTL3-201ENST00000220562 SCAF11Q99590 1463 aaKnown RBP20.61■□□□□ 0.89
EXTL3-201ENST00000220562 FOXO3O43524 673 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 IARSP41252 1262 aaKnown RBP20.61■□□□□ 0.89
EXTL3-201ENST00000220562 NEK1Q96PY6 1258 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 VAT1LQ9HCJ6 419 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 NOS1P29475 1434 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 TTC21BQ7Z4L5 1316 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 GSTTP1A0A1W2PQM5 241 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 KIF20AO95235 890 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 IGHDP01880 384 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 METAP2P50579 478 aaKnown RBP eCLIP20.61■□□□□ 0.89
EXTL3-201ENST00000220562 PANK2Q9BZ23 570 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 INCENPQ9NQS7 918 aa20.61■□□□□ 0.89
EXTL3-201ENST00000220562 PPP1R42Q7Z4L9 355 aa20.6■□□□□ 0.89
EXTL3-201ENST00000220562 PIK3R4Q99570 1358 aa20.6■□□□□ 0.89
EXTL3-201ENST00000220562 PAFAH1B1P43034 410 aa20.6■□□□□ 0.89
EXTL3-201ENST00000220562 JARID2Q92833 1246 aaPredicted RBP20.6■□□□□ 0.89
EXTL3-201ENST00000220562 KAT14Q9H8E8 782 aa20.6■□□□□ 0.89
EXTL3-201ENST00000220562 SLC26A6Q9BXS9 759 aa20.6■□□□□ 0.89
EXTL3-201ENST00000220562 GSDMDP57764 484 aa20.6■□□□□ 0.89
EXTL3-201ENST00000220562 FBXO31Q5XUX0 539 aaPredicted RBP20.6■□□□□ 0.89
EXTL3-201ENST00000220562 HMGB2P26583 209 aaKnown RBP20.59■□□□□ 0.89
EXTL3-201ENST00000220562 POLR3GO15318 223 aaPredicted RBP20.59■□□□□ 0.89
EXTL3-201ENST00000220562 AMPD3Q01432 767 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 CCDC40Q4G0X9 1142 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 BMP2KLQ5H9B9 411 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 MFSD6Q6ZSS7 791 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 MICU3Q86XE3 530 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 NSD2O96028 1365 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 CCDC97Q96F63 343 aaPredicted RBP20.59■□□□□ 0.89
EXTL3-201ENST00000220562 ALS2CR12Q96Q35 445 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 MACROD2A1Z1Q3 448 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 NEMFO60524 1076 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 NCOA1Q15788 1441 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 NCOA7Q8NI08 942 aa20.59■□□□□ 0.89
EXTL3-201ENST00000220562 LDHAL6AQ6ZMR3 332 aa20.58■□□□□ 0.89
EXTL3-201ENST00000220562 CCDC12Q8WUD4 166 aaPredicted RBP20.58■□□□□ 0.89
EXTL3-201ENST00000220562 TCP11L1Q9NUJ3 509 aa20.58■□□□□ 0.89
EXTL3-201ENST00000220562 KIF5BP33176 963 aa20.58■□□□□ 0.89
EXTL3-201ENST00000220562 SPTY2D1Q68D10 685 aaPredicted RBP20.58■□□□□ 0.89
EXTL3-201ENST00000220562 GOLGA6L10A0A0M3HER8 536 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms