RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 MPHOSPH6Q99547 160 aaKnown RBP22.01■■□□□ 1.11
SMPD3-201ENST00000219334 KAT14Q9H8E8 782 aa22.01■■□□□ 1.11
SMPD3-201ENST00000219334 ARHGAP29Q52LW3 1261 aa22■■□□□ 1.11
SMPD3-201ENST00000219334 HDAC9Q9UKV0 1011 aa22■■□□□ 1.11
SMPD3-201ENST00000219334 VPS36Q86VN1 386 aa22■■□□□ 1.11
SMPD3-201ENST00000219334 ACSBG1Q96GR2 724 aa22■■□□□ 1.11
SMPD3-201ENST00000219334 CWC15Q9P013 229 aaKnown RBP22■■□□□ 1.11
SMPD3-201ENST00000219334 DDB1Q16531 1140 aa22■■□□□ 1.11
SMPD3-201ENST00000219334 ENOX2Q16206 610 aaKnown RBP22■■□□□ 1.11
SMPD3-201ENST00000219334 CCDC112Q8NEF3 446 aa22■■□□□ 1.11
SMPD3-201ENST00000219334 CRNKL1Q9BZJ0 848 aaKnown RBP22■■□□□ 1.11
SMPD3-201ENST00000219334 TSPYL1Q9H0U9 437 aa22■■□□□ 1.11
SMPD3-201ENST00000219334 MTERF4Q7Z6M4 381 aaKnown RBP21.99■■□□□ 1.11
SMPD3-201ENST00000219334 KLHL10Q6JEL2 608 aa21.99■■□□□ 1.11
SMPD3-201ENST00000219334 SPDYE4A6NLX3 237 aa21.99■■□□□ 1.11
SMPD3-201ENST00000219334 EZRP15311 586 aaKnown RBP21.99■■□□□ 1.11
SMPD3-201ENST00000219334 NLRP3Q96P20 1036 aa21.99■■□□□ 1.11
SMPD3-201ENST00000219334 CACNA2D4Q7Z3S7 1137 aa21.99■■□□□ 1.11
SMPD3-201ENST00000219334 VAT1LQ9HCJ6 419 aa21.99■■□□□ 1.11
SMPD3-201ENST00000219334 GUCY1B3Q02153 619 aa21.98■■□□□ 1.11
SMPD3-201ENST00000219334 SPA17Q15506 151 aa21.98■■□□□ 1.11
SMPD3-201ENST00000219334 MFSD6Q6ZSS7 791 aa21.98■■□□□ 1.11
SMPD3-201ENST00000219334 TMEM67Q5HYA8 995 aa21.98■■□□□ 1.11
SMPD3-201ENST00000219334 NKTRP30414 1462 aaKnown RBP21.98■■□□□ 1.11
SMPD3-201ENST00000219334 OGFOD1Q8N543 542 aa21.98■■□□□ 1.11
SMPD3-201ENST00000219334 TAX1BP1Q86VP1 789 aa21.97■■□□□ 1.11
SMPD3-201ENST00000219334 CUL7Q14999 1698 aa21.97■■□□□ 1.11
SMPD3-201ENST00000219334 MPNDQ8N594 471 aa21.97■■□□□ 1.11
SMPD3-201ENST00000219334 LIG1P18858 919 aa21.97■■□□□ 1.11
SMPD3-201ENST00000219334 GBP2P32456 591 aaPredicted RBP21.97■■□□□ 1.11
SMPD3-201ENST00000219334 CENPHQ9H3R5 247 aa21.96■■□□□ 1.11
SMPD3-201ENST00000219334 TCP11L1Q9NUJ3 509 aa21.96■■□□□ 1.11
SMPD3-201ENST00000219334 LIMCH1Q9UPQ0 1083 aa21.96■■□□□ 1.11
SMPD3-201ENST00000219334 IARSP41252 1262 aaKnown RBP21.96■■□□□ 1.11
SMPD3-201ENST00000219334 ZGPATQ8N5A5 531 aaKnown RBP21.96■■□□□ 1.11
SMPD3-201ENST00000219334 CCDC97Q96F63 343 aaPredicted RBP21.96■■□□□ 1.11
SMPD3-201ENST00000219334 CAMK4Q16566 473 aa21.96■■□□□ 1.11
SMPD3-201ENST00000219334 ANO10Q9NW15 660 aa21.96■■□□□ 1.11
SMPD3-201ENST00000219334 CALML4Q96GE6 196 aa21.96■■□□□ 1.11
SMPD3-201ENST00000219334 PTPN23Q9H3S7 1636 aa21.96■■□□□ 1.11
SMPD3-201ENST00000219334 CETN1Q12798 172 aa21.95■■□□□ 1.1
SMPD3-201ENST00000219334 ANKRD36BQ8N2N9 1353 aa21.95■■□□□ 1.1
SMPD3-201ENST00000219334 MBIPQ9NS73 344 aa21.95■■□□□ 1.1
SMPD3-201ENST00000219334 CCT2P78371 535 aaKnown RBP21.95■■□□□ 1.1
SMPD3-201ENST00000219334 TEX14Q8IWB6 1497 aa21.95■■□□□ 1.1
SMPD3-201ENST00000219334 PCF11O94913 1555 aaKnown RBP21.94■■□□□ 1.1
SMPD3-201ENST00000219334 UHRF1BP1LA0JNW5 1464 aa21.94■■□□□ 1.1
SMPD3-201ENST00000219334 TRIM27P14373 513 aa21.94■■□□□ 1.1
SMPD3-201ENST00000219334 SAMM50Q9Y512 469 aa21.94■■□□□ 1.1
SMPD3-201ENST00000219334 FAM83GA6ND36 823 aa21.94■■□□□ 1.1
SMPD3-201ENST00000219334 AMPD3Q01432 767 aa21.94■■□□□ 1.1
SMPD3-201ENST00000219334 USP16Q9Y5T5 823 aa21.94■■□□□ 1.1
SMPD3-201ENST00000219334 TRAF1Q13077 416 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 CLEC11AQ9Y240 323 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 POLD1P28340 1107 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 ANAPC15P60006 121 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 LEKR1Q6ZMV7 388 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 STXBP4Q6ZWJ1 553 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 TRMT1LQ7Z2T5 733 aaKnown RBP21.93■■□□□ 1.1
SMPD3-201ENST00000219334 ANXA1P04083 346 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 NBPF14Q5TI25 921 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 NCOA7Q8NI08 942 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 PPP4R3BQ5MIZ7 849 aa21.93■■□□□ 1.1
SMPD3-201ENST00000219334 JARID2Q92833 1246 aaPredicted RBP21.93■■□□□ 1.1
SMPD3-201ENST00000219334 STX8Q9UNK0 236 aa21.92■■□□□ 1.1
SMPD3-201ENST00000219334 WDR97A6NE52 1622 aa21.92■■□□□ 1.1
SMPD3-201ENST00000219334 PLEKHH1Q9ULM0 1364 aa21.92■■□□□ 1.1
SMPD3-201ENST00000219334 EIF3JO75822 258 aaKnown RBP21.92■■□□□ 1.1
SMPD3-201ENST00000219334 MCM4P33991 863 aa21.92■■□□□ 1.1
SMPD3-201ENST00000219334 CCDC148Q8NFR7 591 aa21.92■■□□□ 1.1
SMPD3-201ENST00000219334 CNNM3Q8NE01 707 aa21.92■■□□□ 1.1
SMPD3-201ENST00000219334 XAGE3Q8WTP9 111 aa21.92■■□□□ 1.1
SMPD3-201ENST00000219334 GRPEL1Q9HAV7 217 aa21.92■■□□□ 1.1
SMPD3-201ENST00000219334 HAND2P61296 217 aa21.91■■□□□ 1.1
SMPD3-201ENST00000219334 SLC4A8Q2Y0W8 1093 aa21.91■■□□□ 1.1
SMPD3-201ENST00000219334 NIP7Q9Y221 180 aaKnown RBP eCLIP21.91■■□□□ 1.1
SMPD3-201ENST00000219334 VSIG10Q8N0Z9 540 aa21.91■■□□□ 1.1
SMPD3-201ENST00000219334 IDEP14735 1019 aa21.91■■□□□ 1.1
SMPD3-201ENST00000219334 CCDC178Q5BJE1 867 aa21.91■■□□□ 1.1
SMPD3-201ENST00000219334 MICU3Q86XE3 530 aa21.91■■□□□ 1.1
SMPD3-201ENST00000219334 NYXQ9GZU5 481 aa21.9■■□□□ 1.1
SMPD3-201ENST00000219334 COPS6Q7L5N1 327 aa21.9■■□□□ 1.1
SMPD3-201ENST00000219334 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
SMPD3-201ENST00000219334 SFPQP23246 707 aaKnown RBP eCLIP21.9■■□□□ 1.1
SMPD3-201ENST00000219334 DRC1Q96MC2 740 aa21.9■■□□□ 1.1
SMPD3-201ENST00000219334 IL2RBP14784 551 aa21.9■■□□□ 1.1
SMPD3-201ENST00000219334 IL16Q14005 1332 aa21.9■■□□□ 1.1
SMPD3-201ENST00000219334 METAP2P50579 478 aaKnown RBP eCLIP21.9■■□□□ 1.1
SMPD3-201ENST00000219334 ATP2B3Q16720 1220 aa21.9■■□□□ 1.1
SMPD3-201ENST00000219334 UBA7P41226 1012 aa21.89■■□□□ 1.1
SMPD3-201ENST00000219334 PPM1FP49593 454 aaPredicted RBP21.89■■□□□ 1.1
SMPD3-201ENST00000219334 CCDC144CPQ8IYA2 1237 aa21.89■■□□□ 1.1
SMPD3-201ENST00000219334 TFCP2L1Q9NZI6 479 aa21.89■■□□□ 1.1
SMPD3-201ENST00000219334 CYP7A1P22680 504 aa21.89■■□□□ 1.09
SMPD3-201ENST00000219334 AKAP4Q5JQC9 854 aa21.89■■□□□ 1.09
SMPD3-201ENST00000219334 NF2P35240 595 aa21.89■■□□□ 1.09
SMPD3-201ENST00000219334 C19orf44Q9H6X5 657 aa21.89■■□□□ 1.09
SMPD3-201ENST00000219334 ZFYP08048 801 aaPredicted RBP21.89■■□□□ 1.09
SMPD3-201ENST00000219334 TPTE2Q6XPS3 522 aa21.89■■□□□ 1.09
SMPD3-201ENST00000219334 HMG20BQ9P0W2 317 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms