RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 OS9Q13438 667 aaPredicted RBP16.01■□□□□ 0.15
SRP54-201ENST00000216774 CSPP1Q1MSJ5 1256 aa16.01■□□□□ 0.15
SRP54-201ENST00000216774 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
SRP54-201ENST00000216774 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
SRP54-201ENST00000216774 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
SRP54-201ENST00000216774 ECHDC1Q9NTX5 307 aa16.01■□□□□ 0.15
SRP54-201ENST00000216774 KCNQ3O43525 872 aa16■□□□□ 0.15
SRP54-201ENST00000216774 STX6O43752 255 aa16■□□□□ 0.15
SRP54-201ENST00000216774 UVSSAQ2YD98 709 aa16■□□□□ 0.15
SRP54-201ENST00000216774 RNF214Q8ND24 703 aa16■□□□□ 0.15
SRP54-201ENST00000216774 KCNB2Q92953 911 aa16■□□□□ 0.15
SRP54-201ENST00000216774 TM6SF1Q9BZW5 370 aa16■□□□□ 0.15
SRP54-201ENST00000216774 SYT1P21579 422 aa15.99■□□□□ 0.15
SRP54-201ENST00000216774 CCDC183Q5T5S1 534 aa15.99■□□□□ 0.15
SRP54-201ENST00000216774 VPS53Q5VIR6 699 aa15.99■□□□□ 0.15
SRP54-201ENST00000216774 GDPD2Q9HCC8 539 aa15.99■□□□□ 0.15
SRP54-201ENST00000216774 UBE2HP62256 183 aa15.99■□□□□ 0.15
SRP54-201ENST00000216774 HYPKQ9NX55 129 aa15.99■□□□□ 0.15
SRP54-201ENST00000216774 SPG7Q9UQ90 795 aa15.99■□□□□ 0.15
SRP54-201ENST00000216774 SMC3Q9UQE7 1217 aa15.99■□□□□ 0.15
SRP54-201ENST00000216774 HEG1Q9ULI3 1381 aa15.99■□□□□ 0.15
SRP54-201ENST00000216774 CASTP20810 708 aaKnown RBP15.98■□□□□ 0.15
SRP54-201ENST00000216774 KSR2Q6VAB6 950 aa15.98■□□□□ 0.15
SRP54-201ENST00000216774 ZSCAN31Q96LW9 406 aaPredicted RBP15.98■□□□□ 0.15
SRP54-201ENST00000216774 SH2B1Q9NRF2 756 aaPredicted RBP15.98■□□□□ 0.15
SRP54-201ENST00000216774 C9orf78Q9NZ63 289 aaPredicted RBP15.98■□□□□ 0.15
SRP54-201ENST00000216774 FOXD4L6Q3SYB3 417 aaPredicted RBP15.98■□□□□ 0.15
SRP54-201ENST00000216774 GLIPR1L2Q4G1C9 344 aa15.98■□□□□ 0.15
SRP54-201ENST00000216774 FOXD4L3Q6VB84 417 aaPredicted RBP15.98■□□□□ 0.15
SRP54-201ENST00000216774 EVI5LQ96CN4 794 aa15.98■□□□□ 0.15
SRP54-201ENST00000216774 MAP3K2Q9Y2U5 619 aa15.98■□□□□ 0.15
SRP54-201ENST00000216774 CHD2O14647 1828 aaKnown RBP15.97■□□□□ 0.15
SRP54-201ENST00000216774 RNMTO43148 476 aaKnown RBP15.97■□□□□ 0.15
SRP54-201ENST00000216774 F13A1P00488 732 aa15.97■□□□□ 0.15
SRP54-201ENST00000216774 IFIT2P09913 472 aaKnown RBP15.97■□□□□ 0.15
SRP54-201ENST00000216774 ZSWIM6Q9HCJ5 1215 aa15.97■□□□□ 0.15
SRP54-201ENST00000216774 CNPY2Q9Y2B0 182 aa15.97■□□□□ 0.15
SRP54-201ENST00000216774 LMTK3Q96Q04 1460 aa15.97■□□□□ 0.15
SRP54-201ENST00000216774 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
SRP54-201ENST00000216774 ANXA1P04083 346 aa15.97■□□□□ 0.15
SRP54-201ENST00000216774 C1orf141Q5JVX7 400 aa15.97■□□□□ 0.15
SRP54-201ENST00000216774 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
SRP54-201ENST00000216774 CYP46A1Q9Y6A2 500 aa15.97■□□□□ 0.15
SRP54-201ENST00000216774 RGPD2P0DJD1 1756 aa15.96■□□□□ 0.15
SRP54-201ENST00000216774 HIP1O00291 1037 aa15.96■□□□□ 0.15
SRP54-201ENST00000216774 PSME1Q06323 249 aa15.96■□□□□ 0.15
SRP54-201ENST00000216774 PDRG1Q9NUG6 133 aa15.96■□□□□ 0.15
SRP54-201ENST00000216774 UTYO14607 1347 aa15.96■□□□□ 0.15
SRP54-201ENST00000216774 PDIA4P13667 645 aaKnown RBP15.96■□□□□ 0.14
SRP54-201ENST00000216774 XPCQ01831 940 aaPredicted RBP15.96■□□□□ 0.14
SRP54-201ENST00000216774 PXDNQ92626 1479 aa15.95■□□□□ 0.14
SRP54-201ENST00000216774 PTH1RQ03431 593 aa15.95■□□□□ 0.14
SRP54-201ENST00000216774 LINS1Q8NG48 757 aa15.95■□□□□ 0.14
SRP54-201ENST00000216774 JAKMIP1Q96N16 626 aaKnown RBP15.95■□□□□ 0.14
SRP54-201ENST00000216774 CCDC171Q6TFL3 1326 aa15.95■□□□□ 0.14
SRP54-201ENST00000216774 ZKSCAN1P17029 563 aaPredicted RBP15.94■□□□□ 0.14
SRP54-201ENST00000216774 NECTIN1Q15223 517 aa15.94■□□□□ 0.14
SRP54-201ENST00000216774 PRPF40BQ6NWY9 871 aaKnown RBP15.94■□□□□ 0.14
SRP54-201ENST00000216774 LRRC59Q96AG4 307 aaKnown RBP15.94■□□□□ 0.14
SRP54-201ENST00000216774 SNRKQ9NRH2 765 aa15.94■□□□□ 0.14
SRP54-201ENST00000216774 PTMAP06454 111 aaKnown RBP15.94■□□□□ 0.14
SRP54-201ENST00000216774 CAMTA1Q9Y6Y1 1673 aa15.94■□□□□ 0.14
SRP54-201ENST00000216774 SLIT3O75094 1523 aa15.94■□□□□ 0.14
SRP54-201ENST00000216774 TCHHQ07283 1943 aa15.94■□□□□ 0.14
SRP54-201ENST00000216774 GRM8O00222 908 aa15.93■□□□□ 0.14
SRP54-201ENST00000216774 DDX58O95786 925 aaKnown RBP15.93■□□□□ 0.14
SRP54-201ENST00000216774 GJB2P29033 226 aa15.93■□□□□ 0.14
SRP54-201ENST00000216774 PROSER3Q2NL68 480 aa15.93■□□□□ 0.14
SRP54-201ENST00000216774 AACSQ86V21 672 aa15.93■□□□□ 0.14
SRP54-201ENST00000216774 R3HCC1Q9Y3T6 440 aaKnown RBP15.93■□□□□ 0.14
SRP54-201ENST00000216774 LARGE1O95461 756 aa15.93■□□□□ 0.14
SRP54-201ENST00000216774 ADCK5Q3MIX3 580 aa15.93■□□□□ 0.14
SRP54-201ENST00000216774 ARHGEF25Q86VW2 580 aa15.93■□□□□ 0.14
SRP54-201ENST00000216774 CCDC83Q8IWF9 413 aa15.93■□□□□ 0.14
SRP54-201ENST00000216774 MTMR6Q9Y217 621 aa15.93■□□□□ 0.14
SRP54-201ENST00000216774 SIPA1L3O60292 1781 aaPredicted RBP15.93■□□□□ 0.14
SRP54-201ENST00000216774 CPA1P15085 419 aa15.92■□□□□ 0.14
SRP54-201ENST00000216774 ESCO1Q5FWF5 840 aa15.92■□□□□ 0.14
SRP54-201ENST00000216774 LARP6Q9BRS8 491 aaKnown RBP15.92■□□□□ 0.14
SRP54-201ENST00000216774 PDCL3Q9H2J4 239 aa15.92■□□□□ 0.14
SRP54-201ENST00000216774 PA2G4Q9UQ80 394 aaKnown RBP15.92■□□□□ 0.14
SRP54-201ENST00000216774 ADAMTS7Q9UKP4 1686 aa15.92■□□□□ 0.14
SRP54-201ENST00000216774 KIAA2012Q0VF49 1180 aa15.92■□□□□ 0.14
SRP54-201ENST00000216774 CWF19L2Q2TBE0 894 aaKnown RBP15.92■□□□□ 0.14
SRP54-201ENST00000216774 MAP4K1Q92918 833 aa15.92■□□□□ 0.14
SRP54-201ENST00000216774 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
SRP54-201ENST00000216774 FIBPO43427 364 aa15.91■□□□□ 0.14
SRP54-201ENST00000216774 GCP02774 474 aa15.91■□□□□ 0.14
SRP54-201ENST00000216774 PSMA5P28066 241 aa15.91■□□□□ 0.14
SRP54-201ENST00000216774 CREB3L3Q68CJ9 461 aa15.91■□□□□ 0.14
SRP54-201ENST00000216774 DDX21Q9NR30 783 aaKnown RBP eCLIP15.91■□□□□ 0.14
SRP54-201ENST00000216774 RBM8AQ9Y5S9 174 aaKnown RBP15.91■□□□□ 0.14
SRP54-201ENST00000216774 G3BP1Q13283 466 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■□□□ 11.8
SRP54-201ENST00000216774 ANKLE2Q86XL3 938 aa15.91■□□□□ 0.14
SRP54-201ENST00000216774 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
SRP54-201ENST00000216774 SASH1O94885 1247 aa15.9■□□□□ 0.14
SRP54-201ENST00000216774 KAZALD1Q96I82 304 aa15.9■□□□□ 0.14
SRP54-201ENST00000216774 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
SRP54-201ENST00000216774 SETD1BQ9UPS6 1966 aaKnown RBP15.9■□□□□ 0.14
SRP54-201ENST00000216774 MRC1P22897 1456 aa15.89■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms