RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 TTC22Q5TAA0 569 aa10.89□□□□□ -0.67
MTHFD1-201ENST00000216605 LRRC37A3O60309 1634 aa10.89□□□□□ -0.67
MTHFD1-201ENST00000216605 JARID2Q92833 1246 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-201ENST00000216605 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-201ENST00000216605 TMOD3Q9NYL9 352 aa10.89□□□□□ -0.67
MTHFD1-201ENST00000216605 ANKRD13DQ6ZTN6 518 aa10.88□□□□□ -0.67
MTHFD1-201ENST00000216605 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
MTHFD1-201ENST00000216605 PDCL3Q9H2J4 239 aa10.88□□□□□ -0.67
MTHFD1-201ENST00000216605 GSPT1P15170 499 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-201ENST00000216605 CWC22Q9HCG8 908 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-201ENST00000216605 CAMTA1Q9Y6Y1 1673 aa10.88□□□□□ -0.67
MTHFD1-201ENST00000216605 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 ADCY9O60503 1353 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 XIRP1Q702N8 1843 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 ATP5J2-PTCD1G3V325 749 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 ALDH1L1O75891 902 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 HSCBQ8IWL3 235 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 CHMP3Q9Y3E7 222 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 LMO7Q8WWI1 1683 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 SDSP20132 328 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 MX1P20591 662 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 PDE1AP54750 535 aa10.87□□□□□ -0.67
MTHFD1-201ENST00000216605 OVOS2A0A0G2JMS6 1433 aa10.86□□□□□ -0.67
MTHFD1-201ENST00000216605 GRM8O00222 908 aa10.86□□□□□ -0.67
MTHFD1-201ENST00000216605 SIL1Q9H173 461 aa10.86□□□□□ -0.67
MTHFD1-201ENST00000216605 COL5A2P05997 1499 aaPredicted RBP10.86□□□□□ -0.67
MTHFD1-201ENST00000216605 EXOC5O00471 708 aa10.86□□□□□ -0.67
MTHFD1-201ENST00000216605 HSP90AB4PQ58FF6 505 aa10.86□□□□□ -0.67
MTHFD1-201ENST00000216605 ERVV-2B6SEH9 535 aa10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 MAP4K4O95819 1239 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 A1BGP04217 495 aa10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 HMGB1P09429 215 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 G3BP1Q13283 466 aaKnown RBP eCLIP10.85□□□□□ -0.679e-7■■■□□ 15.9
MTHFD1-201ENST00000216605 RHPN1Q8TCX5 695 aa10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 SSH3Q8TE77 659 aa10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 ZBTB3Q9H5J0 574 aa10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 PA2G4Q9UQ80 394 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 FAM208AQ9UK61 1670 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-201ENST00000216605 PDIA6Q15084 440 aa10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 KIF1BPQ96EK5 621 aa10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 GOLGA6L3A6NEY3 463 aa10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 TOM1O60784 492 aa10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 RAB11FIP3O75154 756 aa10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 CLASRPQ8N2M8 674 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 CACNA1FO60840 1977 aa10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 IFIT2P09913 472 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 FOXD4L5Q5VV16 416 aaPredicted RBP10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 UBE3BQ7Z3V4 1068 aa10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 FOXD4L4Q8WXT5 416 aaPredicted RBP10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 SUCLG2Q96I99 432 aa10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 TBC1D2Q9BYX2 928 aa10.84□□□□□ -0.67
MTHFD1-201ENST00000216605 A0A087WZG4 1122 aa10.83□□□□□ -0.68
MTHFD1-201ENST00000216605 METTL22Q9BUU2 404 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-201ENST00000216605 BICC1Q9H694 974 aaKnown RBP10.83□□□□□ -0.68
MTHFD1-201ENST00000216605 IBTKQ9P2D0 1353 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-201ENST00000216605 PXDNLA1KZ92 1463 aa10.83□□□□□ -0.68
MTHFD1-201ENST00000216605 COL18A1P39060 1754 aa10.83□□□□□ -0.68
MTHFD1-201ENST00000216605 NEURL1BA8MQ27 555 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 UBAP1LF5GYI3 381 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 RRAGDQ9NQL2 400 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 ASAP1Q9ULH1 1129 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 HEG1Q9ULI3 1381 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 KDM3BQ7LBC6 1761 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 IGKV5-2P06315 115 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 GCKRQ14397 625 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 ANTXR1Q9H6X2 564 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 FOXD4L1Q9NU39 408 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 REC8O95072 547 aa10.82□□□□□ -0.68
MTHFD1-201ENST00000216605 TTLL7Q6ZT98 887 aa10.81□□□□□ -0.68
MTHFD1-201ENST00000216605 KLHDC4Q8TBB5 520 aa10.81□□□□□ -0.68
MTHFD1-201ENST00000216605 GPATCH3Q96I76 525 aa10.81□□□□□ -0.68
MTHFD1-201ENST00000216605 AACSQ86V21 672 aa10.81□□□□□ -0.68
MTHFD1-201ENST00000216605 PLCD3Q8N3E9 789 aa10.81□□□□□ -0.68
MTHFD1-201ENST00000216605 ANO2Q9NQ90 1003 aa10.81□□□□□ -0.68
MTHFD1-201ENST00000216605 ERC2O15083 957 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 POLA2Q14181 598 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 ERC1Q8IUD2 1116 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 CNPY4Q8N129 248 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 PLBD2Q8NHP8 589 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 PIGBQ92521 554 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 DNAJC10Q8IXB1 793 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 ACSBG1Q96GR2 724 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 STARD3NLO95772 234 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 XRCC6P12956 609 aaKnown RBP eCLIP10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 DDB1Q16531 1140 aa10.8□□□□□ -0.68
MTHFD1-201ENST00000216605 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 NBPF26B4DH59 902 aa10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 MCM4P33991 863 aa10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 RBM25P49756 843 aaKnown RBP10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 NKX1-1Q15270 411 aaPredicted RBP10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 NBPF14Q5TI25 921 aa10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 NBPF10Q6P3W6 841 aaKnown RBP10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 KIF6Q6ZMV9 814 aa10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 NBPF15Q8N660 670 aa10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 CCDC8Q9H0W5 538 aaPredicted RBP10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 RNF216Q9NWF9 866 aaPredicted RBP10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 PRIM1P49642 420 aaKnown RBP10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 ABCC6O95255 1503 aa10.79□□□□□ -0.68
MTHFD1-201ENST00000216605 CLCN1P35523 988 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms