RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 PI4KAP1Q8N8J0 262 aa19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 PA2G4Q9UQ80 394 aaKnown RBP19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 SNX14Q9Y5W7 946 aa19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 RGPD5Q99666 1765 aa19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 FAM208AQ9UK61 1670 aaKnown RBP19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 CHRNA2Q15822 529 aa19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 AMOTQ4VCS5 1084 aa19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 TNS3Q68CZ2 1445 aa19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 ZNF335Q9H4Z2 1342 aaPredicted RBP19.13■□□□□ 0.65
SNAPC1-201ENST00000216294 TEFQ10587 303 aa19.12■□□□□ 0.65
SNAPC1-201ENST00000216294 C1orf141Q5JVX7 400 aa19.12■□□□□ 0.65
SNAPC1-201ENST00000216294 STAP2Q9UGK3 403 aa19.12■□□□□ 0.65
SNAPC1-201ENST00000216294 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.12■□□□□ 0.65
SNAPC1-201ENST00000216294 PRAMEF22A3QJZ6 481 aa19.12■□□□□ 0.65
SNAPC1-201ENST00000216294 PTMAP06454 111 aaKnown RBP19.12■□□□□ 0.65
SNAPC1-201ENST00000216294 RPAP1Q9BWH6 1393 aaPredicted RBP19.12■□□□□ 0.65
SNAPC1-201ENST00000216294 FIBPO43427 364 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 HSPA4P34932 840 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 PLCB2Q00722 1185 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 TSPY26PQ9H489 355 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 NLRP2Q9NX02 1062 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 ZKSCAN5Q9Y2L8 839 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 RNMTO43148 476 aaKnown RBP19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 ADCK5Q3MIX3 580 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 BRINP3Q76B58 766 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 RUFY3Q7L099 469 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 SSH3Q8TE77 659 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 TSC1Q92574 1164 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 USP25Q9UHP3 1055 aa19.11■□□□□ 0.65
SNAPC1-201ENST00000216294 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
SNAPC1-201ENST00000216294 PTH1RQ03431 593 aa19.1■□□□□ 0.65
SNAPC1-201ENST00000216294 CHMP3Q9Y3E7 222 aa19.1■□□□□ 0.65
SNAPC1-201ENST00000216294 LMO7Q8WWI1 1683 aa19.1■□□□□ 0.65
SNAPC1-201ENST00000216294 CAMTA1Q9Y6Y1 1673 aa19.1■□□□□ 0.65
SNAPC1-201ENST00000216294 STRCQ7RTU9 1775 aa19.1■□□□□ 0.65
SNAPC1-201ENST00000216294 XIRP1Q702N8 1843 aaKnown RBP19.1■□□□□ 0.65
SNAPC1-201ENST00000216294 OS9Q13438 667 aaPredicted RBP19.1■□□□□ 0.65
SNAPC1-201ENST00000216294 TCEANC2Q96MN5 208 aa19.09■□□□□ 0.65
SNAPC1-201ENST00000216294 SPATA31A3Q5VYP0 1347 aa19.09■□□□□ 0.65
SNAPC1-201ENST00000216294 MBD3O95983 291 aa19.09■□□□□ 0.65
SNAPC1-201ENST00000216294 TPM2P07951 284 aa19.09■□□□□ 0.65
SNAPC1-201ENST00000216294 HCLS1P14317 486 aaPredicted RBP19.09■□□□□ 0.65
SNAPC1-201ENST00000216294 CASTP20810 708 aaKnown RBP19.09■□□□□ 0.65
SNAPC1-201ENST00000216294 CCDC83Q8IWF9 413 aa19.09■□□□□ 0.65
SNAPC1-201ENST00000216294 SGSM2O43147 1006 aa19.08■□□□□ 0.65
SNAPC1-201ENST00000216294 LSG1Q9H089 658 aaKnown RBP19.08■□□□□ 0.65
SNAPC1-201ENST00000216294 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.08■□□□□ 0.65
SNAPC1-201ENST00000216294 UQCRHLA0A096LP55 91 aa19.08■□□□□ 0.64
SNAPC1-201ENST00000216294 UQCRHP07919 91 aa19.08■□□□□ 0.64
SNAPC1-201ENST00000216294 MCM2P49736 904 aa19.08■□□□□ 0.64
SNAPC1-201ENST00000216294 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.08■□□□□ 0.64
SNAPC1-201ENST00000216294 FAM177BA6PVY3 158 aa19.08■□□□□ 0.64
SNAPC1-201ENST00000216294 SYT1P21579 422 aa19.08■□□□□ 0.64
SNAPC1-201ENST00000216294 PROSER3Q2NL68 480 aa19.08■□□□□ 0.64
SNAPC1-201ENST00000216294 NECAB1Q8N987 351 aa19.08■□□□□ 0.64
SNAPC1-201ENST00000216294 CSB-PGBD3P0DP91 1061 aa19.07■□□□□ 0.64
SNAPC1-201ENST00000216294 ANAPC15P60006 121 aa19.07■□□□□ 0.64
SNAPC1-201ENST00000216294 CWF19L2Q2TBE0 894 aaKnown RBP19.07■□□□□ 0.64
SNAPC1-201ENST00000216294 FAM173BQ6P4H8 233 aa19.07■□□□□ 0.64
SNAPC1-201ENST00000216294 INTS4Q96HW7 963 aaKnown RBP19.07■□□□□ 0.64
SNAPC1-201ENST00000216294 TTC12Q9H892 705 aaPredicted RBP19.07■□□□□ 0.64
SNAPC1-201ENST00000216294 PRPF40BQ6NWY9 871 aaKnown RBP19.07■□□□□ 0.64
SNAPC1-201ENST00000216294 ZMYND15Q9H091 742 aa19.07■□□□□ 0.64
SNAPC1-201ENST00000216294 GIMAP6Q6P9H5 292 aa19.06■□□□□ 0.64
SNAPC1-201ENST00000216294 RAPGEF4Q8WZA2 1011 aa19.06■□□□□ 0.64
SNAPC1-201ENST00000216294 ZNF500O60304 480 aaPredicted RBP19.06■□□□□ 0.64
SNAPC1-201ENST00000216294 KDM3BQ7LBC6 1761 aa19.05■□□□□ 0.64
SNAPC1-201ENST00000216294 RAD50Q92878 1312 aa19.05■□□□□ 0.64
SNAPC1-201ENST00000216294 TTC14Q96N46 770 aa19.05■□□□□ 0.64
SNAPC1-201ENST00000216294 WDR33Q9C0J8 1336 aaKnown RBP19.05■□□□□ 0.64
SNAPC1-201ENST00000216294 DNM1Q05193 864 aaKnown RBP19.05■□□□□ 0.64
SNAPC1-201ENST00000216294 POLA2Q14181 598 aa19.04■□□□□ 0.64
SNAPC1-201ENST00000216294 BEND3Q5T5X7 828 aa19.04■□□□□ 0.64
SNAPC1-201ENST00000216294 FERMT3Q86UX7 667 aa19.04■□□□□ 0.64
SNAPC1-201ENST00000216294 KLHDC4Q8TBB5 520 aa19.04■□□□□ 0.64
SNAPC1-201ENST00000216294 TAF6LQ9Y6J9 622 aa19.04■□□□□ 0.64
SNAPC1-201ENST00000216294 MEGF6O75095 1541 aa19.04■□□□□ 0.64
SNAPC1-201ENST00000216294 DNAAF4Q8WXU2 420 aa19.04■□□□□ 0.64
SNAPC1-201ENST00000216294 JAKMIP1Q96N16 626 aaKnown RBP19.04■□□□□ 0.64
SNAPC1-201ENST00000216294 COL18A1P39060 1754 aa19.03■□□□□ 0.64
SNAPC1-201ENST00000216294 STX6O43752 255 aa19.03■□□□□ 0.64
SNAPC1-201ENST00000216294 AIMP1Q12904 312 aaKnown RBP19.03■□□□□ 0.64
SNAPC1-201ENST00000216294 CCDC39Q9UFE4 941 aa19.03■□□□□ 0.64
SNAPC1-201ENST00000216294 ZSCAN22P10073 491 aaPredicted RBP19.03■□□□□ 0.64
SNAPC1-201ENST00000216294 SIL1Q9H173 461 aa19.03■□□□□ 0.64
SNAPC1-201ENST00000216294 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
SNAPC1-201ENST00000216294 VPS37CA5D8V6 355 aaPredicted RBP19.02■□□□□ 0.64
SNAPC1-201ENST00000216294 GJB2P29033 226 aa19.02■□□□□ 0.64
SNAPC1-201ENST00000216294 KIF1BPQ96EK5 621 aa19.02■□□□□ 0.64
SNAPC1-201ENST00000216294 FAM227BQ96M60 508 aa19.02■□□□□ 0.64
SNAPC1-201ENST00000216294 SMC3Q9UQE7 1217 aa19.02■□□□□ 0.64
SNAPC1-201ENST00000216294 AP5Z1O43299 807 aa19.02■□□□□ 0.63
SNAPC1-201ENST00000216294 TATP17735 454 aaPredicted RBP19.02■□□□□ 0.63
SNAPC1-201ENST00000216294 HS1BP3Q53T59 392 aa19.02■□□□□ 0.63
SNAPC1-201ENST00000216294 CNTROBQ8N137 903 aa19.02■□□□□ 0.63
SNAPC1-201ENST00000216294 CCDC8Q9H0W5 538 aaPredicted RBP19.02■□□□□ 0.63
SNAPC1-201ENST00000216294 CHGBP05060 677 aa19.01■□□□□ 0.63
SNAPC1-201ENST00000216294 ST3GAL1Q11201 340 aa19.01■□□□□ 0.63
SNAPC1-201ENST00000216294 DNTTIP2Q5QJE6 756 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms