RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 SNRPA1P09661 255 aaKnown RBP26.26■■□□□ 1.79
SYNGR1-201ENST00000216155 SMC1BQ8NDV3 1235 aa26.26■■□□□ 1.79
SYNGR1-201ENST00000216155 ZNF219Q9P2Y4 722 aaPredicted RBP26.26■■□□□ 1.79
SYNGR1-201ENST00000216155 LAMB4A4D0S4 1761 aa26.25■■□□□ 1.79
SYNGR1-201ENST00000216155 NPHP1O15259 732 aa26.25■■□□□ 1.79
SYNGR1-201ENST00000216155 ST5P78524 1137 aa26.25■■□□□ 1.79
SYNGR1-201ENST00000216155 HTATSF1O43719 755 aaKnown RBP26.23■■□□□ 1.79
SYNGR1-201ENST00000216155 SRGNP10124 158 aa26.23■■□□□ 1.79
SYNGR1-201ENST00000216155 VEGFAP15692 232 aaPredicted RBP26.23■■□□□ 1.79
SYNGR1-201ENST00000216155 KLRG1Q96E93 195 aa26.23■■□□□ 1.79
SYNGR1-201ENST00000216155 LTBP3Q9NS15 1303 aa26.22■■□□□ 1.79
SYNGR1-201ENST00000216155 STYK1Q6J9G0 422 aa26.22■■□□□ 1.79
SYNGR1-201ENST00000216155 PRPF40BQ6NWY9 871 aaKnown RBP26.22■■□□□ 1.79
SYNGR1-201ENST00000216155 CLEC4GQ6UXB4 293 aa26.22■■□□□ 1.79
SYNGR1-201ENST00000216155 DLG5Q8TDM6 1919 aa26.22■■□□□ 1.79
SYNGR1-201ENST00000216155 NBPF26B4DH59 902 aa26.21■■□□□ 1.79
SYNGR1-201ENST00000216155 NBPF10Q6P3W6 841 aaKnown RBP26.21■■□□□ 1.79
SYNGR1-201ENST00000216155 NBPF15Q8N660 670 aa26.21■■□□□ 1.79
SYNGR1-201ENST00000216155 CNKSR1Q969H4 720 aa26.21■■□□□ 1.79
SYNGR1-201ENST00000216155 ZNF652Q9Y2D9 606 aa26.21■■□□□ 1.79
SYNGR1-201ENST00000216155 KDM3BQ7LBC6 1761 aa26.2■■□□□ 1.79
SYNGR1-201ENST00000216155 PCNTO95613 3336 aa26.2■■□□□ 1.79
SYNGR1-201ENST00000216155 ERFEQ4G0M1 354 aa26.2■■□□□ 1.78
SYNGR1-201ENST00000216155 MASTLQ96GX5 879 aa26.2■■□□□ 1.78
SYNGR1-201ENST00000216155 TAOK3Q9H2K8 898 aa26.2■■□□□ 1.78
SYNGR1-201ENST00000216155 POTECB2RU33 542 aa26.19■■□□□ 1.78
SYNGR1-201ENST00000216155 NBPF5PQ86XG9 351 aaPredicted RBP26.19■■□□□ 1.78
SYNGR1-201ENST00000216155 JMYQ8N9B5 988 aa26.18■■□□□ 1.78
SYNGR1-201ENST00000216155 RGL2O15211 777 aa26.17■■□□□ 1.78
SYNGR1-201ENST00000216155 TAF7Q15545 349 aaPredicted RBP26.17■■□□□ 1.78
SYNGR1-201ENST00000216155 DPY19L2Q6NUT2 758 aa26.16■■□□□ 1.78
SYNGR1-201ENST00000216155 MIS18AQ9NYP9 233 aa26.16■■□□□ 1.78
SYNGR1-201ENST00000216155 SOGA3Q5TF21 947 aa26.15■■□□□ 1.78
SYNGR1-201ENST00000216155 NIP7Q9Y221 180 aaKnown RBP eCLIP26.15■■□□□ 1.78
SYNGR1-201ENST00000216155 C7orf43Q8WVR3 580 aa26.13■■□□□ 1.77
SYNGR1-201ENST00000216155 PLEKHF1Q96S99 279 aa26.13■■□□□ 1.77
SYNGR1-201ENST00000216155 KLRG2A4D1S0 409 aaPredicted RBP26.12■■□□□ 1.77
SYNGR1-201ENST00000216155 NPR1P16066 1061 aa26.12■■□□□ 1.77
SYNGR1-201ENST00000216155 HLFQ16534 295 aa26.12■■□□□ 1.77
SYNGR1-201ENST00000216155 TPTE2Q6XPS3 522 aa26.11■■□□□ 1.77
SYNGR1-201ENST00000216155 FAM177BA6PVY3 158 aa26.1■■□□□ 1.77
SYNGR1-201ENST00000216155 NEFMP07197 916 aa26.1■■□□□ 1.77
SYNGR1-201ENST00000216155 CCDC93Q567U6 631 aa26.1■■□□□ 1.77
SYNGR1-201ENST00000216155 DDNO94850 711 aaPredicted RBP26.09■■□□□ 1.77
SYNGR1-201ENST00000216155 PNISRQ8TF01 805 aaKnown RBP26.09■■□□□ 1.77
SYNGR1-201ENST00000216155 THUMPD2Q9BTF0 503 aaKnown RBP26.09■■□□□ 1.77
SYNGR1-201ENST00000216155 ABCC12Q96J65 1359 aa26.08■■□□□ 1.77
SYNGR1-201ENST00000216155 NUP98P52948 1817 aa26.08■■□□□ 1.77
SYNGR1-201ENST00000216155 EIF4A1P60842 406 aaKnown RBP26.07■■□□□ 1.76
SYNGR1-201ENST00000216155 NFE2L2Q16236 605 aa26.07■■□□□ 1.76
SYNGR1-201ENST00000216155 FKBP4Q02790 459 aaKnown RBP eCLIP26.06■■□□□ 1.76
SYNGR1-201ENST00000216155 OLFM4Q6UX06 510 aa26.06■■□□□ 1.76
SYNGR1-201ENST00000216155 POTEIP0CG38 1075 aa26.05■■□□□ 1.76
SYNGR1-201ENST00000216155 POTEJP0CG39 1038 aa26.05■■□□□ 1.76
SYNGR1-201ENST00000216155 NGEFQ8N5V2 710 aa26.05■■□□□ 1.76
SYNGR1-201ENST00000216155 MAP3K15Q6ZN16 1313 aa26.05■■□□□ 1.76
SYNGR1-201ENST00000216155 ERVV-1B6SEH8 477 aa26.04■■□□□ 1.76
SYNGR1-201ENST00000216155 SCN4AP35499 1836 aa26.04■■□□□ 1.76
SYNGR1-201ENST00000216155 SNED1Q8TER0 1413 aa26.04■■□□□ 1.76
SYNGR1-201ENST00000216155 TTLL7Q6ZT98 887 aa26.03■■□□□ 1.76
SYNGR1-201ENST00000216155 ZNF277Q9NRM2 450 aaPredicted RBP26.03■■□□□ 1.76
SYNGR1-201ENST00000216155 GTF2E1P29083 439 aaPredicted RBP26.02■■□□□ 1.76
SYNGR1-201ENST00000216155 CHADLQ6NUI6 762 aa26.02■■□□□ 1.76
SYNGR1-201ENST00000216155 NUTM1Q86Y26 1132 aa26.02■■□□□ 1.76
SYNGR1-201ENST00000216155 L3MBTL3Q96JM7 780 aaPredicted RBP26.02■■□□□ 1.76
SYNGR1-201ENST00000216155 RRP7AQ9Y3A4 280 aaKnown RBP26.02■■□□□ 1.76
SYNGR1-201ENST00000216155 ZNF541Q9H0D2 1346 aa26.02■■□□□ 1.76
SYNGR1-201ENST00000216155 MAPK8IP3Q9UPT6 1336 aa26.02■■□□□ 1.76
SYNGR1-201ENST00000216155 CRY2Q49AN0 593 aa26.01■■□□□ 1.75
SYNGR1-201ENST00000216155 KIF6Q6ZMV9 814 aa26.01■■□□□ 1.75
SYNGR1-201ENST00000216155 UBN2Q6ZU65 1347 aa26.01■■□□□ 1.75
SYNGR1-201ENST00000216155 NYXQ9GZU5 481 aa26.01■■□□□ 1.75
SYNGR1-201ENST00000216155 IBTKQ9P2D0 1353 aaPredicted RBP26.01■■□□□ 1.75
SYNGR1-201ENST00000216155 RIC1Q4ADV7 1423 aa26■■□□□ 1.75
SYNGR1-201ENST00000216155 MYL6BP14649 208 aa26■■□□□ 1.75
SYNGR1-201ENST00000216155 ALDH1B1P30837 517 aa26■■□□□ 1.75
SYNGR1-201ENST00000216155 COL13A1Q5TAT6 717 aaPredicted RBP26■■□□□ 1.75
SYNGR1-201ENST00000216155 RTKN2Q8IZC4 609 aa26■■□□□ 1.75
SYNGR1-201ENST00000216155 IQCA1LA6NCM1 817 aa25.99■■□□□ 1.75
SYNGR1-201ENST00000216155 ZBTB3Q9H5J0 574 aa25.99■■□□□ 1.75
SYNGR1-201ENST00000216155 PNNQ9H307 717 aaKnown RBP25.98■■□□□ 1.75
SYNGR1-201ENST00000216155 TAF1DQ9H5J8 278 aaPredicted RBP25.98■■□□□ 1.75
SYNGR1-201ENST00000216155 ERBB4Q15303 1308 aa25.97■■□□□ 1.75
SYNGR1-201ENST00000216155 GPTP24298 496 aa25.97■■□□□ 1.75
SYNGR1-201ENST00000216155 HSPA1AP0DMV8 641 aaKnown RBP25.96■■□□□ 1.75
SYNGR1-201ENST00000216155 HSPA1BP0DMV9 641 aaKnown RBP25.96■■□□□ 1.75
SYNGR1-201ENST00000216155 IARSP41252 1262 aaKnown RBP25.96■■□□□ 1.75
SYNGR1-201ENST00000216155 LDHDQ86WU2 507 aa25.96■■□□□ 1.75
SYNGR1-201ENST00000216155 CREBZFQ9NS37 354 aa25.96■■□□□ 1.75
SYNGR1-201ENST00000216155 ADAMTSL1Q8N6G6 1762 aa25.96■■□□□ 1.75
SYNGR1-201ENST00000216155 SUSD4Q5VX71 490 aa25.95■■□□□ 1.74
SYNGR1-201ENST00000216155 SYNE4Q8N205 404 aa25.95■■□□□ 1.74
SYNGR1-201ENST00000216155 TSPYL4Q9UJ04 414 aa25.95■■□□□ 1.74
SYNGR1-201ENST00000216155 COL4A5P29400 1685 aa25.95■■□□□ 1.74
SYNGR1-201ENST00000216155 LRP10Q7Z4F1 713 aa25.94■■□□□ 1.74
SYNGR1-201ENST00000216155 ZNF34Q8IZ26 560 aa25.94■■□□□ 1.74
SYNGR1-201ENST00000216155 PSMD1Q99460 953 aa25.94■■□□□ 1.74
SYNGR1-201ENST00000216155 PASKQ96RG2 1323 aa25.93■■□□□ 1.74
SYNGR1-201ENST00000216155 FZD9O00144 591 aa25.93■■□□□ 1.74
SYNGR1-201ENST00000216155 NTSR2O95665 410 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms