RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 TTLL7Q6ZT98 887 aa25.77■■□□□ 1.72
RHBDD3-201ENST00000216085 BCL2L13Q9BXK5 485 aa25.77■■□□□ 1.72
RHBDD3-201ENST00000216085 KIF16BQ96L93 1317 aa25.77■■□□□ 1.72
RHBDD3-201ENST00000216085 CASZ1Q86V15 1759 aa25.76■■□□□ 1.71
RHBDD3-201ENST00000216085 CAMTA2O94983 1202 aa25.76■■□□□ 1.71
RHBDD3-201ENST00000216085 FKBP5Q13451 457 aaPredicted RBP25.76■■□□□ 1.71
RHBDD3-201ENST00000216085 CLEC4GQ6UXB4 293 aa25.76■■□□□ 1.71
RHBDD3-201ENST00000216085 ANKRD13DQ6ZTN6 518 aa25.76■■□□□ 1.71
RHBDD3-201ENST00000216085 NLGN1Q8N2Q7 840 aa25.76■■□□□ 1.71
RHBDD3-201ENST00000216085 MRPL50Q8N5N7 158 aaKnown RBP25.76■■□□□ 1.71
RHBDD3-201ENST00000216085 ZBTB3Q9H5J0 574 aa25.76■■□□□ 1.71
RHBDD3-201ENST00000216085 SRP68Q9UHB9 627 aaKnown RBP25.76■■□□□ 1.71
RHBDD3-201ENST00000216085 BCORQ6W2J9 1755 aa25.75■■□□□ 1.71
RHBDD3-201ENST00000216085 RIC3Q7Z5B4 369 aa25.75■■□□□ 1.71
RHBDD3-201ENST00000216085 PLBD2Q8NHP8 589 aa25.75■■□□□ 1.71
RHBDD3-201ENST00000216085 MTFR1LQ9H019 292 aa25.74■■□□□ 1.71
RHBDD3-201ENST00000216085 PTPRCP08575 1304 aa25.74■■□□□ 1.71
RHBDD3-201ENST00000216085 GYS1P13807 737 aa25.74■■□□□ 1.71
RHBDD3-201ENST00000216085 BRPF1P55201 1214 aaPredicted RBP25.74■■□□□ 1.71
RHBDD3-201ENST00000216085 HSP90AB3PQ58FF7 597 aa25.74■■□□□ 1.71
RHBDD3-201ENST00000216085 PDGFDQ9GZP0 370 aaPredicted RBP25.73■■□□□ 1.71
RHBDD3-201ENST00000216085 RCAN3Q9UKA8 241 aa25.73■■□□□ 1.71
RHBDD3-201ENST00000216085 G2E3Q7L622 706 aa25.72■■□□□ 1.71
RHBDD3-201ENST00000216085 GIGYF2Q6Y7W6 1299 aaKnown RBP25.72■■□□□ 1.71
RHBDD3-201ENST00000216085 ZBTB7AO95365 584 aa25.71■■□□□ 1.71
RHBDD3-201ENST00000216085 KSR2Q6VAB6 950 aa25.71■■□□□ 1.71
RHBDD3-201ENST00000216085 IPO8O15397 1037 aaKnown RBP25.7■■□□□ 1.7
RHBDD3-201ENST00000216085 FKBP8Q14318 412 aa25.69■■□□□ 1.7
RHBDD3-201ENST00000216085 MSL1Q68DK7 614 aa25.69■■□□□ 1.7
RHBDD3-201ENST00000216085 PI4KAP2A4QPH2 592 aa25.69■■□□□ 1.7
RHBDD3-201ENST00000216085 POLD1P28340 1107 aa25.69■■□□□ 1.7
RHBDD3-201ENST00000216085 NEXNQ0ZGT2 675 aa25.69■■□□□ 1.7
RHBDD3-201ENST00000216085 PI4KAP1Q8N8J0 262 aa25.69■■□□□ 1.7
RHBDD3-201ENST00000216085 HLFQ16534 295 aa25.68■■□□□ 1.7
RHBDD3-201ENST00000216085 BCL2L12Q9HB09 334 aa25.68■■□□□ 1.7
RHBDD3-201ENST00000216085 MAP3K2Q9Y2U5 619 aa25.68■■□□□ 1.7
RHBDD3-201ENST00000216085 ATP10DQ9P241 1426 aa25.68■■□□□ 1.7
RHBDD3-201ENST00000216085 BCAR3O75815 825 aa25.67■■□□□ 1.7
RHBDD3-201ENST00000216085 SETDB2Q96T68 719 aa25.67■■□□□ 1.7
RHBDD3-201ENST00000216085 NOB1Q9ULX3 412 aaKnown RBP25.67■■□□□ 1.7
RHBDD3-201ENST00000216085 ARFGEF2Q9Y6D5 1785 aa25.67■■□□□ 1.7
RHBDD3-201ENST00000216085 API5Q9BZZ5 524 aaKnown RBP25.67■■□□□ 1.7
RHBDD3-201ENST00000216085 SPON1Q9HCB6 807 aa25.67■■□□□ 1.7
RHBDD3-201ENST00000216085 NIP7Q9Y221 180 aaKnown RBP eCLIP25.67■■□□□ 1.7
RHBDD3-201ENST00000216085 DNAAF4Q8WXU2 420 aa25.66■■□□□ 1.7
RHBDD3-201ENST00000216085 FRAT1Q92837 279 aaPredicted RBP25.66■■□□□ 1.7
RHBDD3-201ENST00000216085 ADCY9O60503 1353 aa25.66■■□□□ 1.7
RHBDD3-201ENST00000216085 NUP98P52948 1817 aa25.65■■□□□ 1.7
RHBDD3-201ENST00000216085 TCIRG1Q13488 830 aa25.65■■□□□ 1.7
RHBDD3-201ENST00000216085 TBC1D9BQ66K14 1250 aa25.65■■□□□ 1.7
RHBDD3-201ENST00000216085 BICDL1Q6ZP65 573 aa25.65■■□□□ 1.7
RHBDD3-201ENST00000216085 ARHGAP45Q92619 1136 aa25.65■■□□□ 1.7
RHBDD3-201ENST00000216085 METTL22Q9BUU2 404 aaPredicted RBP25.65■■□□□ 1.7
RHBDD3-201ENST00000216085 ATF5Q9Y2D1 282 aaPredicted RBP25.65■■□□□ 1.7
RHBDD3-201ENST00000216085 CARMIL3Q8ND23 1372 aa25.65■■□□□ 1.7
RHBDD3-201ENST00000216085 PARP3Q9Y6F1 533 aa25.64■■□□□ 1.7
RHBDD3-201ENST00000216085 MMP10P09238 476 aa25.64■■□□□ 1.69
RHBDD3-201ENST00000216085 NFIXQ14938 502 aa25.64■■□□□ 1.69
RHBDD3-201ENST00000216085 PARP10Q53GL7 1025 aa25.64■■□□□ 1.69
RHBDD3-201ENST00000216085 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.64■■□□□ 1.69
RHBDD3-201ENST00000216085 ZKSCAN2Q63HK3 967 aa25.63■■□□□ 1.69
RHBDD3-201ENST00000216085 MYD88Q99836 296 aa25.63■■□□□ 1.69
RHBDD3-201ENST00000216085 ANKRD36CQ5JPF3 1778 aa25.62■■□□□ 1.69
RHBDD3-201ENST00000216085 NPHP1O15259 732 aa25.61■■□□□ 1.69
RHBDD3-201ENST00000216085 GPTP24298 496 aa25.61■■□□□ 1.69
RHBDD3-201ENST00000216085 TM4SF1P30408 202 aa25.61■■□□□ 1.69
RHBDD3-201ENST00000216085 SLC4A10Q6U841 1118 aa25.61■■□□□ 1.69
RHBDD3-201ENST00000216085 ZNF34Q8IZ26 560 aa25.61■■□□□ 1.69
RHBDD3-201ENST00000216085 F6X3S4 739 aa25.6■■□□□ 1.69
RHBDD3-201ENST00000216085 ATF7IPQ6VMQ6 1270 aa25.6■■□□□ 1.69
RHBDD3-201ENST00000216085 PPP1R42Q7Z4L9 355 aa25.6■■□□□ 1.69
RHBDD3-201ENST00000216085 NYXQ9GZU5 481 aa25.6■■□□□ 1.69
RHBDD3-201ENST00000216085 PXDNLA1KZ92 1463 aa25.6■■□□□ 1.69
RHBDD3-201ENST00000216085 NBPF5PQ86XG9 351 aaPredicted RBP25.59■■□□□ 1.69
RHBDD3-201ENST00000216085 COL24A1Q17RW2 1714 aa25.59■■□□□ 1.69
RHBDD3-201ENST00000216085 MS4A1P11836 297 aa25.59■■□□□ 1.69
RHBDD3-201ENST00000216085 LINS1Q8NG48 757 aa25.59■■□□□ 1.69
RHBDD3-201ENST00000216085 ISCA1Q9BUE6 129 aa25.59■■□□□ 1.69
RHBDD3-201ENST00000216085 ATP5J2-PTCD1G3V325 749 aa25.58■■□□□ 1.69
RHBDD3-201ENST00000216085 POLRMTO00411 1230 aaKnown RBP25.58■■□□□ 1.69
RHBDD3-201ENST00000216085 TRIM28Q13263 835 aaKnown RBP25.58■■□□□ 1.69
RHBDD3-201ENST00000216085 FTSJ3Q8IY81 847 aaKnown RBP25.58■■□□□ 1.69
RHBDD3-201ENST00000216085 CCDC191Q8NCU4 936 aa25.58■■□□□ 1.69
RHBDD3-201ENST00000216085 IBTKQ9P2D0 1353 aaPredicted RBP25.58■■□□□ 1.69
RHBDD3-201ENST00000216085 GTF2E1P29083 439 aaPredicted RBP25.57■■□□□ 1.68
RHBDD3-201ENST00000216085 DDR1Q08345 913 aa25.57■■□□□ 1.68
RHBDD3-201ENST00000216085 RNF123Q5XPI4 1314 aa25.57■■□□□ 1.68
RHBDD3-201ENST00000216085 UBN2Q6ZU65 1347 aa25.57■■□□□ 1.68
RHBDD3-201ENST00000216085 SERPINB2P05120 415 aa25.56■■□□□ 1.68
RHBDD3-201ENST00000216085 TPTE2Q6XPS3 522 aa25.56■■□□□ 1.68
RHBDD3-201ENST00000216085 NLRP10Q86W26 655 aa25.56■■□□□ 1.68
RHBDD3-201ENST00000216085 CNBD1Q8NA66 436 aa25.56■■□□□ 1.68
RHBDD3-201ENST00000216085 CWC25Q9NXE8 425 aaPredicted RBP25.56■■□□□ 1.68
RHBDD3-201ENST00000216085 TRIM27P14373 513 aa25.56■■□□□ 1.68
RHBDD3-201ENST00000216085 CCT4P50991 539 aaKnown RBP25.56■■□□□ 1.68
RHBDD3-201ENST00000216085 SRCIN1Q9C0H9 1055 aa25.56■■□□□ 1.68
RHBDD3-201ENST00000216085 CENPBP07199 599 aaPredicted RBP25.55■■□□□ 1.68
RHBDD3-201ENST00000216085 UTP14AQ9BVJ6 771 aaKnown RBP25.55■■□□□ 1.68
RHBDD3-201ENST00000216085 FAM177BA6PVY3 158 aa25.54■■□□□ 1.68
RHBDD3-201ENST00000216085 NEURL1BA8MQ27 555 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms