RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 UQCRHLA0A096LP55 91 aa18.11■□□□□ 0.49
EFNB1-201ENST00000204961 UQCRHP07919 91 aa18.11■□□□□ 0.49
EFNB1-201ENST00000204961 HSP90B1P14625 803 aaKnown RBP18.11■□□□□ 0.49
EFNB1-201ENST00000204961 BICC1Q9H694 974 aaKnown RBP18.11■□□□□ 0.49
EFNB1-201ENST00000204961 ADAMTS13Q76LX8 1427 aa18.11■□□□□ 0.49
EFNB1-201ENST00000204961 SSH3Q8TE77 659 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 NEUROD6Q96NK8 337 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 SEC62Q99442 399 aaKnown RBP18.1■□□□□ 0.49
EFNB1-201ENST00000204961 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 MYD88Q99836 296 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 OSBPL3Q9H4L5 887 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 TCHHQ07283 1943 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 RAB11FIP3O75154 756 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 CHST3Q7LGC8 479 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 THEMISQ8N1K5 641 aaPredicted RBP18.1■□□□□ 0.49
EFNB1-201ENST00000204961 SUCLG2Q96I99 432 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 AXIN2Q9Y2T1 843 aa18.1■□□□□ 0.49
EFNB1-201ENST00000204961 GUCY1B3Q02153 619 aa18.09■□□□□ 0.49
EFNB1-201ENST00000204961 NMIQ13287 307 aaPredicted RBP18.09■□□□□ 0.49
EFNB1-201ENST00000204961 OVOS2A0A0J9YW53 1432 aa18.09■□□□□ 0.49
EFNB1-201ENST00000204961 OVOS2Q6IE36 1432 aa18.09■□□□□ 0.49
EFNB1-201ENST00000204961 HSPA4P34932 840 aa18.09■□□□□ 0.49
EFNB1-201ENST00000204961 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
EFNB1-201ENST00000204961 EAF2Q96CJ1 260 aaPredicted RBP18.09■□□□□ 0.49
EFNB1-201ENST00000204961 CDC42BPGQ6DT37 1551 aa18.09■□□□□ 0.49
EFNB1-201ENST00000204961 WDR33Q9C0J8 1336 aaKnown RBP18.08■□□□□ 0.49
EFNB1-201ENST00000204961 GOLGA6L4A6NEF3 574 aa18.08■□□□□ 0.49
EFNB1-201ENST00000204961 PPP1R9BQ96SB3 815 aa18.08■□□□□ 0.49
EFNB1-201ENST00000204961 LARP1BQ659C4 914 aaKnown RBP18.08■□□□□ 0.48
EFNB1-201ENST00000204961 PRDM10Q9NQV6 1147 aa18.08■□□□□ 0.48
EFNB1-201ENST00000204961 LIMCH1Q9UPQ0 1083 aa18.08■□□□□ 0.48
EFNB1-201ENST00000204961 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.08■□□□□ 0.48
EFNB1-201ENST00000204961 DRC7Q8IY82 874 aa18.08■□□□□ 0.48
EFNB1-201ENST00000204961 ERCC4Q92889 916 aaPredicted RBP18.08■□□□□ 0.48
EFNB1-201ENST00000204961 ISY1Q9ULR0 285 aaKnown RBP18.08■□□□□ 0.48
EFNB1-201ENST00000204961 RBM8AQ9Y5S9 174 aaKnown RBP18.08■□□□□ 0.48
EFNB1-201ENST00000204961 ADCY5O95622 1261 aa18.07■□□□□ 0.48
EFNB1-201ENST00000204961 MBD3O95983 291 aa18.07■□□□□ 0.48
EFNB1-201ENST00000204961 ANKRD24Q8TF21 1146 aa18.07■□□□□ 0.48
EFNB1-201ENST00000204961 LSG1Q9H089 658 aaKnown RBP18.07■□□□□ 0.48
EFNB1-201ENST00000204961 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.07■□□□□ 0.48
EFNB1-201ENST00000204961 ME3Q16798 604 aa18.07■□□□□ 0.48
EFNB1-201ENST00000204961 ANKRD26Q9UPS8 1709 aa18.07■□□□□ 0.48
EFNB1-201ENST00000204961 DDX46Q7L014 1031 aaKnown RBP18.06■□□□□ 0.48
EFNB1-201ENST00000204961 COPS6Q7L5N1 327 aa18.06■□□□□ 0.48
EFNB1-201ENST00000204961 CYP46A1Q9Y6A2 500 aa18.06■□□□□ 0.48
EFNB1-201ENST00000204961 TTC21AQ8NDW8 1320 aa18.06■□□□□ 0.48
EFNB1-201ENST00000204961 SALL3Q9BXA9 1300 aa18.06■□□□□ 0.48
EFNB1-201ENST00000204961 A0A0D9SFI3 127 aa18.06■□□□□ 0.48
EFNB1-201ENST00000204961 ZSCAN22P10073 491 aaPredicted RBP18.06■□□□□ 0.48
EFNB1-201ENST00000204961 ECHDC1Q9NTX5 307 aa18.06■□□□□ 0.48
EFNB1-201ENST00000204961 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
EFNB1-201ENST00000204961 HSP90AB3PQ58FF7 597 aa18.06■□□□□ 0.48
EFNB1-201ENST00000204961 ARHGEF10O15013 1369 aa18.06■□□□□ 0.48
EFNB1-201ENST00000204961 UBE3BQ7Z3V4 1068 aa18.05■□□□□ 0.48
EFNB1-201ENST00000204961 SYAP1Q96A49 352 aaPredicted RBP18.05■□□□□ 0.48
EFNB1-201ENST00000204961 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
EFNB1-201ENST00000204961 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
EFNB1-201ENST00000204961 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
EFNB1-201ENST00000204961 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
EFNB1-201ENST00000204961 GCP02774 474 aa18.05■□□□□ 0.48
EFNB1-201ENST00000204961 TPM2P07951 284 aa18.05■□□□□ 0.48
EFNB1-201ENST00000204961 ZKSCAN1P17029 563 aaPredicted RBP18.05■□□□□ 0.48
EFNB1-201ENST00000204961 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
EFNB1-201ENST00000204961 EPHA10Q5JZY3 1008 aa18.05■□□□□ 0.48
EFNB1-201ENST00000204961 GLRX3O76003 335 aaKnown RBP18.04■□□□□ 0.48
EFNB1-201ENST00000204961 MCM2P49736 904 aa18.04■□□□□ 0.48
EFNB1-201ENST00000204961 ZNF589Q86UQ0 364 aaPredicted RBP18.04■□□□□ 0.48
EFNB1-201ENST00000204961 STK11IPQ8N1F8 1099 aa18.04■□□□□ 0.48
EFNB1-201ENST00000204961 DBF4Q9UBU7 674 aaPredicted RBP18.04■□□□□ 0.48
EFNB1-201ENST00000204961 RAD50Q92878 1312 aa18.04■□□□□ 0.48
EFNB1-201ENST00000204961 CDC37L1Q7L3B6 337 aa18.04■□□□□ 0.48
EFNB1-201ENST00000204961 TPCN1Q9ULQ1 816 aa18.04■□□□□ 0.48
EFNB1-201ENST00000204961 PEAK1Q9H792 1746 aa18.04■□□□□ 0.48
EFNB1-201ENST00000204961 JAK2O60674 1132 aa18.03■□□□□ 0.48
EFNB1-201ENST00000204961 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
EFNB1-201ENST00000204961 CCT2P78371 535 aaKnown RBP18.03■□□□□ 0.48
EFNB1-201ENST00000204961 CUL4AQ13619 759 aa18.03■□□□□ 0.48
EFNB1-201ENST00000204961 ZKSCAN5Q9Y2L8 839 aa18.03■□□□□ 0.48
EFNB1-201ENST00000204961 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
EFNB1-201ENST00000204961 SASH1O94885 1247 aa18.03■□□□□ 0.48
EFNB1-201ENST00000204961 F13A1P00488 732 aa18.03■□□□□ 0.48
EFNB1-201ENST00000204961 SNRKQ9NRH2 765 aa18.03■□□□□ 0.48
EFNB1-201ENST00000204961 OFD1O75665 1012 aa18.02■□□□□ 0.48
EFNB1-201ENST00000204961 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.02■□□□□ 0.48
EFNB1-201ENST00000204961 IP6K1Q92551 441 aa18.02■□□□□ 0.48
EFNB1-201ENST00000204961 STAP2Q9UGK3 403 aa18.02■□□□□ 0.48
EFNB1-201ENST00000204961 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.02■□□□□ 0.48
EFNB1-201ENST00000204961 RNMTO43148 476 aaKnown RBP18.02■□□□□ 0.48
EFNB1-201ENST00000204961 CREB3L3Q68CJ9 461 aa18.01■□□□□ 0.47
EFNB1-201ENST00000204961 GPATCH3Q96I76 525 aa18.01■□□□□ 0.47
EFNB1-201ENST00000204961 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
EFNB1-201ENST00000204961 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
EFNB1-201ENST00000204961 BICD2Q8TD16 824 aa18.01■□□□□ 0.47
EFNB1-201ENST00000204961 PDCL3Q9H2J4 239 aa18.01■□□□□ 0.47
EFNB1-201ENST00000204961 NOL7Q9UMY1 257 aaKnown RBP18.01■□□□□ 0.47
EFNB1-201ENST00000204961 GIGYF1O75420 1035 aaPredicted RBP18.01■□□□□ 0.47
EFNB1-201ENST00000204961 FTOQ9C0B1 505 aaKnown RBP eCLIP18.01■□□□□ 0.47
EFNB1-201ENST00000204961 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
EFNB1-201ENST00000204961 GRM8O00222 908 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms