RNA–Protein interactions for RNA: ENST00000201943.10

CACNB4-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-201ENST00000201943 ST5P78524 1137 aa16.14■□□□□ 0.17
CACNB4-201ENST00000201943 C7orf43Q8WVR3 580 aa16.14■□□□□ 0.17
CACNB4-201ENST00000201943 L3MBTL3Q96JM7 780 aaPredicted RBP16.14■□□□□ 0.17
CACNB4-201ENST00000201943 IQCA1LA6NCM1 817 aa16.13■□□□□ 0.17
CACNB4-201ENST00000201943 NPM2Q86SE8 214 aaKnown RBP16.13■□□□□ 0.17
CACNB4-201ENST00000201943 PASKQ96RG2 1323 aa16.13■□□□□ 0.17
CACNB4-201ENST00000201943 CNTNAP1P78357 1384 aa16.13■□□□□ 0.17
CACNB4-201ENST00000201943 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
CACNB4-201ENST00000201943 COL3A1P02461 1466 aaPredicted RBP16.13■□□□□ 0.17
CACNB4-201ENST00000201943 ARFGEF2Q9Y6D5 1785 aa16.13■□□□□ 0.17
CACNB4-201ENST00000201943 CC2D1BQ5T0F9 858 aaKnown RBP16.13■□□□□ 0.17
CACNB4-201ENST00000201943 CLEC4GQ6UXB4 293 aa16.13■□□□□ 0.17
CACNB4-201ENST00000201943 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
CACNB4-201ENST00000201943 DZIP3Q86Y13 1208 aaKnown RBP16.13■□□□□ 0.17
CACNB4-201ENST00000201943 SCN4AP35499 1836 aa16.12■□□□□ 0.17
CACNB4-201ENST00000201943 NPHP1O15259 732 aa16.12■□□□□ 0.17
CACNB4-201ENST00000201943 TAF1DQ9H5J8 278 aaPredicted RBP16.12■□□□□ 0.17
CACNB4-201ENST00000201943 KLRG2A4D1S0 409 aaPredicted RBP16.11■□□□□ 0.17
CACNB4-201ENST00000201943 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
CACNB4-201ENST00000201943 FOXN1O15353 648 aa16.11■□□□□ 0.17
CACNB4-201ENST00000201943 KCNQ3O43525 872 aa16.11■□□□□ 0.17
CACNB4-201ENST00000201943 PRDM10Q9NQV6 1147 aa16.11■□□□□ 0.17
CACNB4-201ENST00000201943 USP16Q9Y5T5 823 aa16.11■□□□□ 0.17
CACNB4-201ENST00000201943 BCORQ6W2J9 1755 aa16.11■□□□□ 0.17
CACNB4-201ENST00000201943 CACNA1SQ13698 1873 aa16.1■□□□□ 0.17
CACNB4-201ENST00000201943 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
CACNB4-201ENST00000201943 ITGBL1O95965 494 aaPredicted RBP16.1■□□□□ 0.17
CACNB4-201ENST00000201943 NPR1P16066 1061 aa16.1■□□□□ 0.17
CACNB4-201ENST00000201943 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
CACNB4-201ENST00000201943 NBPF5PQ86XG9 351 aaPredicted RBP16.1■□□□□ 0.17
CACNB4-201ENST00000201943 NPC1L1Q9UHC9 1359 aa16.1■□□□□ 0.17
CACNB4-201ENST00000201943 TMEM88BA6NKF7 163 aa16.08■□□□□ 0.16
CACNB4-201ENST00000201943 RGL2O15211 777 aa16.08■□□□□ 0.16
CACNB4-201ENST00000201943 VEGFBP49765 207 aa16.08■□□□□ 0.16
CACNB4-201ENST00000201943 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.16
CACNB4-201ENST00000201943 PHACTR3Q96KR7 559 aa16.08■□□□□ 0.16
CACNB4-201ENST00000201943 ZNF541Q9H0D2 1346 aa16.07■□□□□ 0.16
CACNB4-201ENST00000201943 PIP4K2AP48426 406 aaPredicted RBP16.07■□□□□ 0.16
CACNB4-201ENST00000201943 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
CACNB4-201ENST00000201943 PRAMEF22A3QJZ6 481 aa16.06■□□□□ 0.16
CACNB4-201ENST00000201943 SNRPA1P09661 255 aaKnown RBP16.06■□□□□ 0.16
CACNB4-201ENST00000201943 CTCFP49711 727 aaPredicted RBP16.06■□□□□ 0.16
CACNB4-201ENST00000201943 TPTE2Q6XPS3 522 aa16.06■□□□□ 0.16
CACNB4-201ENST00000201943 RTKN2Q8IZC4 609 aa16.06■□□□□ 0.16
CACNB4-201ENST00000201943 ZNF277Q9NRM2 450 aaPredicted RBP16.06■□□□□ 0.16
CACNB4-201ENST00000201943 HACL1Q9UJ83 578 aa16.06■□□□□ 0.16
CACNB4-201ENST00000201943 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
CACNB4-201ENST00000201943 AIDAQ96BJ3 306 aa16.05■□□□□ 0.16
CACNB4-201ENST00000201943 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
CACNB4-201ENST00000201943 WBP1LQ9NX94 342 aa16.05■□□□□ 0.16
CACNB4-201ENST00000201943 FZD9O00144 591 aa16.04■□□□□ 0.16
CACNB4-201ENST00000201943 PRKAR2BP31323 418 aa16.04■□□□□ 0.16
CACNB4-201ENST00000201943 EPHX2P34913 555 aa16.04■□□□□ 0.16
CACNB4-201ENST00000201943 OLFM4Q6UX06 510 aa16.04■□□□□ 0.16
CACNB4-201ENST00000201943 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
CACNB4-201ENST00000201943 NIP7Q9Y221 180 aaKnown RBP eCLIP16.04■□□□□ 0.16
CACNB4-201ENST00000201943 ADAMTSL1Q8N6G6 1762 aa16.04■□□□□ 0.16
CACNB4-201ENST00000201943 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
CACNB4-201ENST00000201943 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
CACNB4-201ENST00000201943 NBPF15Q8N660 670 aa16.03■□□□□ 0.16
CACNB4-201ENST00000201943 RASSF10A6NK89 507 aa16.02■□□□□ 0.16
CACNB4-201ENST00000201943 ALDH1B1P30837 517 aa16.02■□□□□ 0.16
CACNB4-201ENST00000201943 IARSP41252 1262 aaKnown RBP16.02■□□□□ 0.16
CACNB4-201ENST00000201943 CNTROBQ8N137 903 aa16.02■□□□□ 0.16
CACNB4-201ENST00000201943 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
CACNB4-201ENST00000201943 GPC2Q8N158 579 aa16.01■□□□□ 0.15
CACNB4-201ENST00000201943 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
CACNB4-201ENST00000201943 RNF123Q5XPI4 1314 aa16.01■□□□□ 0.15
CACNB4-201ENST00000201943 LBX1P52954 281 aa16■□□□□ 0.15
CACNB4-201ENST00000201943 DEFB115Q30KQ5 88 aa16■□□□□ 0.15
CACNB4-201ENST00000201943 CRY2Q49AN0 593 aa16■□□□□ 0.15
CACNB4-201ENST00000201943 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
CACNB4-201ENST00000201943 MCM10Q7L590 875 aa16■□□□□ 0.15
CACNB4-201ENST00000201943 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
CACNB4-201ENST00000201943 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
CACNB4-201ENST00000201943 PSMD1Q99460 953 aa16■□□□□ 0.15
CACNB4-201ENST00000201943 SNED1Q8TER0 1413 aa16■□□□□ 0.15
CACNB4-201ENST00000201943 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
CACNB4-201ENST00000201943 HLFQ16534 295 aa16■□□□□ 0.15
CACNB4-201ENST00000201943 CFAP53Q96M91 514 aa16■□□□□ 0.15
CACNB4-201ENST00000201943 FAM177BA6PVY3 158 aa15.99■□□□□ 0.15
CACNB4-201ENST00000201943 HTATSF1O43719 755 aaKnown RBP15.99■□□□□ 0.15
CACNB4-201ENST00000201943 CC2D2BQ6DHV5 1058 aa15.99■□□□□ 0.15
CACNB4-201ENST00000201943 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
CACNB4-201ENST00000201943 HSPA8P11142 646 aaKnown RBP15.98■□□□□ 0.15
CACNB4-201ENST00000201943 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
CACNB4-201ENST00000201943 MAP2K1Q02750 393 aaPredicted RBP15.98■□□□□ 0.15
CACNB4-201ENST00000201943 JDP2Q8WYK2 163 aa15.98■□□□□ 0.15
CACNB4-201ENST00000201943 NUDCQ9Y266 331 aa15.98■□□□□ 0.15
CACNB4-201ENST00000201943 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
CACNB4-201ENST00000201943 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
CACNB4-201ENST00000201943 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
CACNB4-201ENST00000201943 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
CACNB4-201ENST00000201943 ERVV-1B6SEH8 477 aa15.96■□□□□ 0.15
CACNB4-201ENST00000201943 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
CACNB4-201ENST00000201943 HOXA10P31260 410 aaPredicted RBP15.96■□□□□ 0.15
CACNB4-201ENST00000201943 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
CACNB4-201ENST00000201943 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
CACNB4-201ENST00000201943 ABT1Q9ULW3 272 aaKnown RBP15.96■□□□□ 0.15
CACNB4-201ENST00000201943 COL4A5P29400 1685 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms