RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 GNAT3A8MTJ3 354 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 UVSSAQ2YD98 709 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 DRC1Q96MC2 740 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 GJB2P29033 226 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 MAP3K12Q12852 859 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 RRS1Q15050 365 aaKnown RBP19.75■□□□□ 0.75
ITGB4-201ENST00000200181 KIAA0753Q2KHM9 967 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 ERBINQ96RT1 1412 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 WIZO95785 1651 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 MYO1BO43795 1136 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 DAAM2Q86T65 1068 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
ITGB4-201ENST00000200181 CCT2P78371 535 aaKnown RBP19.74■□□□□ 0.75
ITGB4-201ENST00000200181 RNF41Q9H4P4 317 aaPredicted RBP19.74■□□□□ 0.75
ITGB4-201ENST00000200181 IFIT3O14879 490 aaKnown RBP19.74■□□□□ 0.75
ITGB4-201ENST00000200181 KRT222Q8N1A0 295 aa19.74■□□□□ 0.75
ITGB4-201ENST00000200181 ACTN2P35609 894 aa19.74■□□□□ 0.75
ITGB4-201ENST00000200181 DZIP1Q86YF9 867 aaKnown RBP19.74■□□□□ 0.75
ITGB4-201ENST00000200181 MXRA7P84157 204 aa19.74■□□□□ 0.75
ITGB4-201ENST00000200181 CCDC171Q6TFL3 1326 aa19.74■□□□□ 0.75
ITGB4-201ENST00000200181 PYM1Q9BRP8 204 aaKnown RBP19.74■□□□□ 0.75
ITGB4-201ENST00000200181 TCP11L1Q9NUJ3 509 aa19.74■□□□□ 0.75
ITGB4-201ENST00000200181 RTEL1-TNFRSF6BF6WH68 1400 aa19.73■□□□□ 0.75
ITGB4-201ENST00000200181 CATIPQ7Z7H3 387 aa19.73■□□□□ 0.75
ITGB4-201ENST00000200181 SREK1Q8WXA9 508 aaKnown RBP19.73■□□□□ 0.75
ITGB4-201ENST00000200181 DUSP27Q5VZP5 1158 aa19.73■□□□□ 0.75
ITGB4-201ENST00000200181 GDPD2Q9HCC8 539 aa19.73■□□□□ 0.75
ITGB4-201ENST00000200181 IVLP07476 585 aa19.73■□□□□ 0.75
ITGB4-201ENST00000200181 STARD3NLO95772 234 aa19.73■□□□□ 0.75
ITGB4-201ENST00000200181 TMPOP42166 694 aaKnown RBP19.73■□□□□ 0.75
ITGB4-201ENST00000200181 ZNF165P49910 485 aa19.73■□□□□ 0.75
ITGB4-201ENST00000200181 STXBP4Q6ZWJ1 553 aa19.73■□□□□ 0.75
ITGB4-201ENST00000200181 IDEP14735 1019 aa19.72■□□□□ 0.75
ITGB4-201ENST00000200181 KANK3Q6NY19 840 aa19.72■□□□□ 0.75
ITGB4-201ENST00000200181 TBC1D2Q9BYX2 928 aa19.72■□□□□ 0.75
ITGB4-201ENST00000200181 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
ITGB4-201ENST00000200181 TFIP11Q9UBB9 837 aaKnown RBP19.72■□□□□ 0.75
ITGB4-201ENST00000200181 MSL1Q68DK7 614 aa19.72■□□□□ 0.75
ITGB4-201ENST00000200181 UBE2Q2Q8WVN8 375 aa19.72■□□□□ 0.75
ITGB4-201ENST00000200181 STX6O43752 255 aa19.72■□□□□ 0.75
ITGB4-201ENST00000200181 RSPH14Q9UHP6 348 aa19.72■□□□□ 0.75
ITGB4-201ENST00000200181 PUF60Q9UHX1 559 aaKnown RBP19.71■□□□□ 0.75
ITGB4-201ENST00000200181 MYD88Q99836 296 aa19.71■□□□□ 0.75
ITGB4-201ENST00000200181 HFM1A2PYH4 1435 aa19.71■□□□□ 0.75
ITGB4-201ENST00000200181 ISM2Q6H9L7 571 aa19.7■□□□□ 0.74
ITGB4-201ENST00000200181 GOLIM4O00461 696 aa19.7■□□□□ 0.74
ITGB4-201ENST00000200181 MIS18AQ9NYP9 233 aa19.7■□□□□ 0.74
ITGB4-201ENST00000200181 CCDC160A6NGH7 325 aa19.7■□□□□ 0.74
ITGB4-201ENST00000200181 PAIP2Q9BPZ3 127 aaKnown RBP19.7■□□□□ 0.74
ITGB4-201ENST00000200181 IQCGQ9H095 443 aaKnown RBP19.7■□□□□ 0.74
ITGB4-201ENST00000200181 CCDC8Q9H0W5 538 aaPredicted RBP19.7■□□□□ 0.74
ITGB4-201ENST00000200181 TTC21AQ8NDW8 1320 aa19.7■□□□□ 0.74
ITGB4-201ENST00000200181 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
ITGB4-201ENST00000200181 KIF4AO95239 1232 aa19.7■□□□□ 0.74
ITGB4-201ENST00000200181 SYCP3Q8IZU3 236 aa19.7■□□□□ 0.74
ITGB4-201ENST00000200181 RBM27Q9P2N5 1060 aaKnown RBP19.7■□□□□ 0.74
ITGB4-201ENST00000200181 NUTM2BA6NNL0 878 aaPredicted RBP19.7■□□□□ 0.74
ITGB4-201ENST00000200181 NUTM2EB1AL46 878 aaPredicted RBP19.7■□□□□ 0.74
ITGB4-201ENST00000200181 NUTM2AQ8IVF1 878 aaPredicted RBP19.7■□□□□ 0.74
ITGB4-201ENST00000200181 LARP6Q9BRS8 491 aaKnown RBP19.7■□□□□ 0.74
ITGB4-201ENST00000200181 POLA1P09884 1462 aaPredicted RBP19.69■□□□□ 0.74
ITGB4-201ENST00000200181 CAVIN2O95810 425 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 SSX2IPQ9Y2D8 614 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 CTAGE15A4D2H0 777 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 CTAGE8P0CG41 777 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 SLC5A1P13866 664 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 CTAGE6Q86UF2 777 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 SKAP1Q86WV1 359 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 CTAGE4Q8IX94 777 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 PANK2Q9BZ23 570 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 CCDC102BQ68D86 513 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 ZNF652Q9Y2D9 606 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 NCOA2Q15596 1464 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 UBE2HP62256 183 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 ALDH1L2Q3SY69 923 aa19.69■□□□□ 0.74
ITGB4-201ENST00000200181 N4BP3O15049 544 aa19.68■□□□□ 0.74
ITGB4-201ENST00000200181 AKR1B10O60218 316 aa19.68■□□□□ 0.74
ITGB4-201ENST00000200181 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.68■□□□□ 0.74
ITGB4-201ENST00000200181 CCDC172P0C7W6 258 aa19.68■□□□□ 0.74
ITGB4-201ENST00000200181 TRIM47Q96LD4 638 aa19.68■□□□□ 0.74
ITGB4-201ENST00000200181 RNF216Q9NWF9 866 aaPredicted RBP19.68■□□□□ 0.74
ITGB4-201ENST00000200181 IARSP41252 1262 aaKnown RBP19.68■□□□□ 0.74
ITGB4-201ENST00000200181 LRRC27Q9C0I9 530 aa19.68■□□□□ 0.74
ITGB4-201ENST00000200181 PLVAPQ9BX97 442 aa19.68■□□□□ 0.74
ITGB4-201ENST00000200181 ARFGAP3Q9NP61 516 aa19.68■□□□□ 0.74
ITGB4-201ENST00000200181 HYPKQ9NX55 129 aa19.68■□□□□ 0.74
ITGB4-201ENST00000200181 RASAL2Q9UJF2 1139 aa19.68■□□□□ 0.74
ITGB4-201ENST00000200181 USP16Q9Y5T5 823 aa19.67■□□□□ 0.74
ITGB4-201ENST00000200181 RAB3IL1Q8TBN0 382 aa19.67■□□□□ 0.74
ITGB4-201ENST00000200181 OPA1O60313 960 aa19.67■□□□□ 0.74
ITGB4-201ENST00000200181 ATRIPQ8WXE1 791 aa19.67■□□□□ 0.74
ITGB4-201ENST00000200181 ANKIB1Q9P2G1 1089 aa19.67■□□□□ 0.74
ITGB4-201ENST00000200181 UBA7P41226 1012 aa19.67■□□□□ 0.74
ITGB4-201ENST00000200181 PRDM11Q9NQV5 511 aa19.67■□□□□ 0.74
ITGB4-201ENST00000200181 EXOC1Q9NV70 894 aa19.67■□□□□ 0.74
ITGB4-201ENST00000200181 APBB1IPQ7Z5R6 666 aaPredicted RBP19.66■□□□□ 0.74
ITGB4-201ENST00000200181 TBC1D5Q92609 795 aa19.66■□□□□ 0.74
ITGB4-201ENST00000200181 IFIT5Q13325 482 aaKnown RBP19.66■□□□□ 0.74
ITGB4-201ENST00000200181 RMND1Q9NWS8 449 aa19.66■□□□□ 0.74
ITGB4-201ENST00000200181 CYLC1P35663 651 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms