RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
CHERP-201ENST00000198939 DIAPH3Q9NSV4 1193 aa12.4□□□□□ -0.42
CHERP-201ENST00000198939 HTATSF1O43719 755 aaKnown RBP12.4□□□□□ -0.42
CHERP-201ENST00000198939 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
CHERP-201ENST00000198939 USHBP1Q8N6Y0 703 aa12.4□□□□□ -0.42
CHERP-201ENST00000198939 RXRBP28702 533 aa12.39□□□□□ -0.43
CHERP-201ENST00000198939 ATRNO75882 1429 aa12.39□□□□□ -0.43
CHERP-201ENST00000198939 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
CHERP-201ENST00000198939 ZGPATQ8N5A5 531 aaKnown RBP12.38□□□□□ -0.43
CHERP-201ENST00000198939 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.38□□□□□ -0.43
CHERP-201ENST00000198939 VGLL3A8MV65 326 aa12.38□□□□□ -0.43
CHERP-201ENST00000198939 NFE2L2Q16236 605 aa12.38□□□□□ -0.43
CHERP-201ENST00000198939 DDB1Q16531 1140 aa12.38□□□□□ -0.43
CHERP-201ENST00000198939 PCDH11XQ9BZA7 1347 aa12.38□□□□□ -0.43
CHERP-201ENST00000198939 PCDH11YQ9BZA8 1340 aa12.38□□□□□ -0.43
CHERP-201ENST00000198939 ATP2B3Q16720 1220 aa12.38□□□□□ -0.43
CHERP-201ENST00000198939 AEBP1Q8IUX7 1158 aa12.38□□□□□ -0.43
CHERP-201ENST00000198939 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
CHERP-201ENST00000198939 PIBF1Q8WXW3 757 aa12.38□□□□□ -0.43
CHERP-201ENST00000198939 TTC12Q9H892 705 aaPredicted RBP12.38□□□□□ -0.43
CHERP-201ENST00000198939 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
CHERP-201ENST00000198939 ZNF530Q6P9A1 599 aaPredicted RBP12.37□□□□□ -0.43
CHERP-201ENST00000198939 CHAMP1Q96JM3 812 aa12.37□□□□□ -0.43
CHERP-201ENST00000198939 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
CHERP-201ENST00000198939 AKAP4Q5JQC9 854 aa12.37□□□□□ -0.43
CHERP-201ENST00000198939 INTS3Q68E01 1043 aaKnown RBP12.37□□□□□ -0.43
CHERP-201ENST00000198939 C17orf53Q8N3J3 647 aaPredicted RBP12.37□□□□□ -0.43
CHERP-201ENST00000198939 ZNF710Q8N1W2 664 aa12.36□□□□□ -0.43
CHERP-201ENST00000198939 BCL2L12Q9HB09 334 aa12.36□□□□□ -0.43
CHERP-201ENST00000198939 NAP1L2Q9ULW6 460 aaPredicted RBP12.36□□□□□ -0.43
CHERP-201ENST00000198939 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
CHERP-201ENST00000198939 FAM98CQ17RN3 349 aaKnown RBP12.36□□□□□ -0.43
CHERP-201ENST00000198939 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
CHERP-201ENST00000198939 CHMP4AQ9BY43 222 aa12.36□□□□□ -0.43
CHERP-201ENST00000198939 NRAPQ86VF7 1730 aa12.35□□□□□ -0.43
CHERP-201ENST00000198939 TMPOP42166 694 aaKnown RBP12.35□□□□□ -0.43
CHERP-201ENST00000198939 OVOS2A0A0G2JMS6 1433 aa12.35□□□□□ -0.43
CHERP-201ENST00000198939 RGPD5Q99666 1765 aa12.35□□□□□ -0.43
CHERP-201ENST00000198939 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHERP-201ENST00000198939 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
CHERP-201ENST00000198939 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
CHERP-201ENST00000198939 NSFL1CQ9UNZ2 370 aaKnown RBP12.35□□□□□ -0.43
CHERP-201ENST00000198939 RGPD1P0DJD0 1748 aa12.35□□□□□ -0.43
CHERP-201ENST00000198939 ONECUT3O60422 494 aaPredicted RBP12.35□□□□□ -0.43
CHERP-201ENST00000198939 APBB1O00213 710 aa12.34□□□□□ -0.43
CHERP-201ENST00000198939 ADCY5O95622 1261 aa12.34□□□□□ -0.43
CHERP-201ENST00000198939 CYP2E1P05181 493 aaPredicted RBP12.34□□□□□ -0.43
CHERP-201ENST00000198939 MTHFSDQ2M296 383 aaKnown RBP12.34□□□□□ -0.43
CHERP-201ENST00000198939 REC8O95072 547 aa12.33□□□□□ -0.43
CHERP-201ENST00000198939 DCAF5Q96JK2 942 aa12.33□□□□□ -0.44
CHERP-201ENST00000198939 DDX54Q8TDD1 881 aaKnown RBP12.33□□□□□ -0.44
CHERP-201ENST00000198939 PHACTR3Q96KR7 559 aa12.33□□□□□ -0.44
CHERP-201ENST00000198939 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
CHERP-201ENST00000198939 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
CHERP-201ENST00000198939 NEK4P51957 841 aa12.32□□□□□ -0.44
CHERP-201ENST00000198939 SEPT12Q8IYM1 358 aa12.32□□□□□ -0.44
CHERP-201ENST00000198939 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
CHERP-201ENST00000198939 DISP2A7MBM2 1401 aa12.32□□□□□ -0.44
CHERP-201ENST00000198939 PARP4Q9UKK3 1724 aaKnown RBP12.32□□□□□ -0.44
CHERP-201ENST00000198939 HMGB2P26583 209 aaKnown RBP12.32□□□□□ -0.44
CHERP-201ENST00000198939 GTF2F1P35269 517 aaKnown RBP eCLIP12.32□□□□□ -0.442e-8■■■■■ 34.1
CHERP-201ENST00000198939 UVSSAQ2YD98 709 aa12.32□□□□□ -0.44
CHERP-201ENST00000198939 USP26Q9BXU7 913 aa12.32□□□□□ -0.44
CHERP-201ENST00000198939 GOLGA6L6A8MZA4 724 aa12.32□□□□□ -0.44
CHERP-201ENST00000198939 PHKG2P15735 406 aa12.32□□□□□ -0.44
CHERP-201ENST00000198939 TEFQ10587 303 aa12.31□□□□□ -0.44
CHERP-201ENST00000198939 GDPD2Q9HCC8 539 aa12.31□□□□□ -0.44
CHERP-201ENST00000198939 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
CHERP-201ENST00000198939 TNS2Q63HR2 1409 aa12.3□□□□□ -0.44
CHERP-201ENST00000198939 MEGF6O75095 1541 aa12.3□□□□□ -0.44
CHERP-201ENST00000198939 ERICH4A6NGS2 130 aa12.3□□□□□ -0.44
CHERP-201ENST00000198939 ELL2O00472 640 aaPredicted RBP12.3□□□□□ -0.44
CHERP-201ENST00000198939 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
CHERP-201ENST00000198939 FEZ1Q99689 392 aa12.3□□□□□ -0.44
CHERP-201ENST00000198939 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
CHERP-201ENST00000198939 CCDC66A2RUB6 948 aa12.3□□□□□ -0.44
CHERP-201ENST00000198939 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
CHERP-201ENST00000198939 FKBP5Q13451 457 aaPredicted RBP12.3□□□□□ -0.44
CHERP-201ENST00000198939 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
CHERP-201ENST00000198939 AK9Q5TCS8 1911 aa12.3□□□□□ -0.44
CHERP-201ENST00000198939 ZDHHC9Q9Y397 364 aa12.3□□□□□ -0.44
CHERP-201ENST00000198939 APPP05067 770 aa12.29□□□□□ -0.44
CHERP-201ENST00000198939 ALDH1L2Q3SY69 923 aa12.29□□□□□ -0.44
CHERP-201ENST00000198939 KRT27Q7Z3Y8 459 aa12.29□□□□□ -0.44
CHERP-201ENST00000198939 SPC24Q8NBT2 197 aa12.29□□□□□ -0.44
CHERP-201ENST00000198939 IL16Q14005 1332 aa12.29□□□□□ -0.44
CHERP-201ENST00000198939 OGFRQ9NZT2 677 aa12.29□□□□□ -0.44
CHERP-201ENST00000198939 HCLS1P14317 486 aaPredicted RBP12.29□□□□□ -0.44
CHERP-201ENST00000198939 KCNJ4P48050 445 aa12.29□□□□□ -0.44
CHERP-201ENST00000198939 GNAI1P63096 354 aa12.29□□□□□ -0.44
CHERP-201ENST00000198939 ZBTB7BO15156 539 aaPredicted RBP12.28□□□□□ -0.44
CHERP-201ENST00000198939 MCCP23508 829 aa12.28□□□□□ -0.44
CHERP-201ENST00000198939 FAM196AQ6ZSG2 479 aa12.28□□□□□ -0.44
CHERP-201ENST00000198939 RNMTO43148 476 aaKnown RBP12.28□□□□□ -0.44
CHERP-201ENST00000198939 TPM3P06753 285 aa12.28□□□□□ -0.44
CHERP-201ENST00000198939 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
CHERP-201ENST00000198939 CABP4P57796 275 aa12.28□□□□□ -0.44
CHERP-201ENST00000198939 TTC22Q5TAA0 569 aa12.28□□□□□ -0.44
CHERP-201ENST00000198939 PLEKHM2Q8IWE5 1019 aa12.27□□□□□ -0.44
CHERP-201ENST00000198939 TMX3Q96JJ7 454 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms