RNA–Protein interactions for RNA: ENST00000160373.7

CTTNBP2-201, Transcript of cortactin binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTTNBP2, Length 5,970 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-201ENST00000160373 CABP5Q9NP86 173 aa13.71□□□□□ -0.21
CTTNBP2-201ENST00000160373 TNNQ9UQP3 1299 aa13.71□□□□□ -0.21
CTTNBP2-201ENST00000160373 OGFOD1Q8N543 542 aa13.71□□□□□ -0.22
CTTNBP2-201ENST00000160373 C8orf76Q96K31 380 aa13.71□□□□□ -0.22
CTTNBP2-201ENST00000160373 PARP3Q9Y6F1 533 aa13.71□□□□□ -0.22
CTTNBP2-201ENST00000160373 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.22
CTTNBP2-201ENST00000160373 TMEM67Q5HYA8 995 aa13.71□□□□□ -0.22
CTTNBP2-201ENST00000160373 SAMM50Q9Y512 469 aa13.71□□□□□ -0.22
CTTNBP2-201ENST00000160373 GJA3Q9Y6H8 435 aa13.71□□□□□ -0.22
CTTNBP2-201ENST00000160373 PTPRKQ15262 1439 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 BAG3O95817 575 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 TSPYL6Q8N831 410 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 GDPD2Q9HCC8 539 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 POLD1P28340 1107 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 ATP2B3Q16720 1220 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 SMARCE1Q969G3 411 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 ZNHIT6Q9NWK9 470 aaKnown RBP13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 TFIP11Q9UBB9 837 aaKnown RBP13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 PIK3R4Q99570 1358 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 SBNO2Q9Y2G9 1366 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 HMGB2P26583 209 aaKnown RBP13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 AKAP4Q5JQC9 854 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 PPFIBP1Q86W92 1011 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 MIGA1Q8NAN2 632 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 NBPF14Q5TI25 921 aa13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
CTTNBP2-201ENST00000160373 GPS2Q13227 327 aa13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 CATIPQ7Z7H3 387 aa13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 WASF1Q92558 559 aa13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 CUL5Q93034 780 aa13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 HLA-DOAP06340 250 aa13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 CCDC192P0DO97 292 aa13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 CCDC194A0A1B0GVG4 234 aa13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 TNIP1Q15025 636 aa13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 NUP153P49790 1475 aaKnown RBP13.69□□□□□ -0.22
CTTNBP2-201ENST00000160373 NKTRP30414 1462 aaKnown RBP13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 LDHCP07864 332 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 SMARCC1Q92922 1105 aaPredicted RBP13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 PTPRCP08575 1304 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 CFAP45Q9UL16 551 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 MAP3K19Q56UN5 1328 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 ZNF518AQ6AHZ1 1483 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 ISM2Q6H9L7 571 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 TPTE2Q6XPS3 522 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 TTC16Q8NEE8 873 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 FAM89AQ96GI7 184 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 CCNL1Q9UK58 526 aaPredicted RBP13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 HCLS1P14317 486 aaPredicted RBP13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 PLS1Q14651 629 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 MFSD6Q6ZSS7 791 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 C16orf71Q8IYS4 520 aaPredicted RBP13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 VTI1AQ96AJ9 217 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 GRM8O00222 908 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 KAT14Q9H8E8 782 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 USP16Q9Y5T5 823 aa13.68□□□□□ -0.22
CTTNBP2-201ENST00000160373 IRS4O14654 1257 aaPredicted RBP13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 EIF5P55010 431 aaKnown RBP13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 SPTY2D1Q68D10 685 aaPredicted RBP13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 IGHDP01880 384 aa13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 FAM43AQ8N2R8 423 aa13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 NUP62CLQ9H1M0 184 aa13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 SLC4A4Q9Y6R1 1079 aa13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 RPRD2Q5VT52 1461 aaKnown RBP13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 HOXC9P31274 260 aa13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
CTTNBP2-201ENST00000160373 IDEP14735 1019 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 SSRP1Q08945 709 aaKnown RBP13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 FAM182BQ5T319 152 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 CHST3Q7LGC8 479 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 JDP2Q8WYK2 163 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 RNF41Q9H4P4 317 aaPredicted RBP13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 RAPGEF6Q8TEU7 1601 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 PRKG1Q13976 671 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 SLC9C2Q5TAH2 1124 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 PDE4BQ07343 736 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 ANKRD36BQ8N2N9 1353 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 DNA2P51530 1060 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 TRAPPC3LQ5T215 181 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 TMEM87AQ8NBN3 555 aa13.66□□□□□ -0.22
CTTNBP2-201ENST00000160373 CCDC196A0A1B0GTZ2 297 aa13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 CA8P35219 290 aa13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 BIN1O00499 593 aa13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 NAA16Q6N069 864 aaPredicted RBP13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 CRNKL1Q9BZJ0 848 aaKnown RBP13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 TSPY3P0CV98 308 aa13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 TSPY8P0CW00 308 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms