RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 ZNF335Q9H4Z2 1342 aaPredicted RBP13.44□□□□□ -0.26
PKP2-201ENST00000070846 A1BGP04217 495 aa13.44□□□□□ -0.26
PKP2-201ENST00000070846 HAND2P61296 217 aa13.44□□□□□ -0.26
PKP2-201ENST00000070846 ALDH1L1O75891 902 aa13.44□□□□□ -0.26
PKP2-201ENST00000070846 SPTY2D1Q68D10 685 aaPredicted RBP13.44□□□□□ -0.26
PKP2-201ENST00000070846 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
PKP2-201ENST00000070846 RHPN1Q8TCX5 695 aa13.44□□□□□ -0.26
PKP2-201ENST00000070846 FAM89AQ96GI7 184 aa13.44□□□□□ -0.26
PKP2-201ENST00000070846 DNAJC10Q8IXB1 793 aa13.44□□□□□ -0.26
PKP2-201ENST00000070846 CCDC24Q8N4L8 307 aa13.43□□□□□ -0.26
PKP2-201ENST00000070846 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
PKP2-201ENST00000070846 NOL7Q9UMY1 257 aaKnown RBP13.43□□□□□ -0.26
PKP2-201ENST00000070846 ASXL1Q8IXJ9 1541 aa13.43□□□□□ -0.26
PKP2-201ENST00000070846 IFIT3O14879 490 aaKnown RBP13.43□□□□□ -0.26
PKP2-201ENST00000070846 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
PKP2-201ENST00000070846 RNF214Q8ND24 703 aa13.43□□□□□ -0.26
PKP2-201ENST00000070846 CABP5Q9NP86 173 aa13.43□□□□□ -0.26
PKP2-201ENST00000070846 DDX21Q9NR30 783 aaKnown RBP eCLIP13.43□□□□□ -0.26
PKP2-201ENST00000070846 SEC63Q9UGP8 760 aaKnown RBP13.43□□□□□ -0.26
PKP2-201ENST00000070846 STX8Q9UNK0 236 aa13.43□□□□□ -0.26
PKP2-201ENST00000070846 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
PKP2-201ENST00000070846 TTF1Q15361 905 aaPredicted RBP13.43□□□□□ -0.26
PKP2-201ENST00000070846 CT47A1Q5JQC4 288 aaPredicted RBP13.43□□□□□ -0.26
PKP2-201ENST00000070846 RNF41Q9H4P4 317 aaPredicted RBP13.43□□□□□ -0.26
PKP2-201ENST00000070846 PA2G4Q9UQ80 394 aaKnown RBP13.43□□□□□ -0.26
PKP2-201ENST00000070846 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
PKP2-201ENST00000070846 TSPY2A6NKD2 308 aa13.42□□□□□ -0.26
PKP2-201ENST00000070846 HLA-DOAP06340 250 aa13.42□□□□□ -0.26
PKP2-201ENST00000070846 PHAXQ9H814 394 aaKnown RBP13.42□□□□□ -0.26
PKP2-201ENST00000070846 QTRT2Q9H974 415 aaKnown RBP13.42□□□□□ -0.26
PKP2-201ENST00000070846 UQCRFS1P1P0C7P4 283 aa13.42□□□□□ -0.26
PKP2-201ENST00000070846 FERMT3Q86UX7 667 aa13.42□□□□□ -0.26
PKP2-201ENST00000070846 PLEKHH1Q9ULM0 1364 aa13.42□□□□□ -0.26
PKP2-201ENST00000070846 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
PKP2-201ENST00000070846 PZPP20742 1482 aa13.42□□□□□ -0.26
PKP2-201ENST00000070846 HCLS1P14317 486 aaPredicted RBP13.41□□□□□ -0.26
PKP2-201ENST00000070846 HDAC9Q9UKV0 1011 aa13.41□□□□□ -0.26
PKP2-201ENST00000070846 JAG2Q9Y219 1238 aa13.41□□□□□ -0.26
PKP2-201ENST00000070846 POLR3AO14802 1390 aaPredicted RBP13.41□□□□□ -0.26
PKP2-201ENST00000070846 IL15P40933 162 aaPredicted RBP13.41□□□□□ -0.26
PKP2-201ENST00000070846 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
PKP2-201ENST00000070846 SBNO1A3KN83 1393 aa13.41□□□□□ -0.26
PKP2-201ENST00000070846 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
PKP2-201ENST00000070846 VAMP4O75379 141 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 CYP7A1P22680 504 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 ZFYVE27Q5T4F4 411 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 RSPH6AQ9H0K4 717 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 CCDC196A0A1B0GTZ2 297 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
PKP2-201ENST00000070846 ARHGAP45Q92619 1136 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 VAT1LQ9HCJ6 419 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 KRT85P78386 507 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 ZNF496Q96IT1 587 aaPredicted RBP13.4□□□□□ -0.26
PKP2-201ENST00000070846 ZSCAN31Q96LW9 406 aaPredicted RBP13.4□□□□□ -0.26
PKP2-201ENST00000070846 BACH2Q9BYV9 841 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 K7ELQ4 463 aaPredicted RBP13.4□□□□□ -0.26
PKP2-201ENST00000070846 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
PKP2-201ENST00000070846 NAP1L1P55209 391 aaKnown RBP13.4□□□□□ -0.26
PKP2-201ENST00000070846 FAM182BQ5T319 152 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 ARID3AQ99856 593 aa13.4□□□□□ -0.26
PKP2-201ENST00000070846 TRMT1LQ7Z2T5 733 aaKnown RBP13.39□□□□□ -0.27
PKP2-201ENST00000070846 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
PKP2-201ENST00000070846 IL13P35225 146 aa13.39□□□□□ -0.27
PKP2-201ENST00000070846 BMP2KQ9NSY1 1161 aaPredicted RBP13.39□□□□□ -0.27
PKP2-201ENST00000070846 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
PKP2-201ENST00000070846 WDR33Q9C0J8 1336 aaKnown RBP13.39□□□□□ -0.27
PKP2-201ENST00000070846 PDE4BQ07343 736 aa13.39□□□□□ -0.27
PKP2-201ENST00000070846 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
PKP2-201ENST00000070846 NAT10Q9H0A0 1025 aaKnown RBP13.39□□□□□ -0.27
PKP2-201ENST00000070846 PICALMQ13492 652 aa13.38□□□□□ -0.27
PKP2-201ENST00000070846 NAA16Q6N069 864 aaPredicted RBP13.38□□□□□ -0.27
PKP2-201ENST00000070846 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
PKP2-201ENST00000070846 WASF1Q92558 559 aa13.38□□□□□ -0.27
PKP2-201ENST00000070846 CRNKL1Q9BZJ0 848 aaKnown RBP13.38□□□□□ -0.27
PKP2-201ENST00000070846 METP08581 1390 aa13.38□□□□□ -0.27
PKP2-201ENST00000070846 ODF2Q5BJF6 829 aa13.38□□□□□ -0.27
PKP2-201ENST00000070846 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
PKP2-201ENST00000070846 TRPC5Q9UL62 973 aaPredicted RBP13.38□□□□□ -0.27
PKP2-201ENST00000070846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.38□□□□□ -0.27
PKP2-201ENST00000070846 SLC9C2Q5TAH2 1124 aa13.38□□□□□ -0.27
PKP2-201ENST00000070846 HOMER1Q86YM7 354 aa13.38□□□□□ -0.27
PKP2-201ENST00000070846 ZNF592Q92610 1267 aa13.37□□□□□ -0.27
PKP2-201ENST00000070846 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
PKP2-201ENST00000070846 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
PKP2-201ENST00000070846 SLC52A2Q9HAB3 445 aa13.37□□□□□ -0.27
PKP2-201ENST00000070846 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
PKP2-201ENST00000070846 GUCY1B3Q02153 619 aa13.37□□□□□ -0.27
PKP2-201ENST00000070846 ZNF804AQ7Z570 1209 aa13.37□□□□□ -0.27
PKP2-201ENST00000070846 PDILTQ8N807 584 aa13.37□□□□□ -0.27
PKP2-201ENST00000070846 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
PKP2-201ENST00000070846 GJA3Q9Y6H8 435 aa13.37□□□□□ -0.27
PKP2-201ENST00000070846 NPHP4O75161 1426 aaPredicted RBP13.37□□□□□ -0.27
PKP2-201ENST00000070846 COL17A1Q9UMD9 1497 aaPredicted RBP13.36□□□□□ -0.27
PKP2-201ENST00000070846 MBD3O95983 291 aa13.36□□□□□ -0.27
PKP2-201ENST00000070846 CCT2P78371 535 aaKnown RBP13.36□□□□□ -0.27
PKP2-201ENST00000070846 CATIPQ7Z7H3 387 aa13.36□□□□□ -0.27
PKP2-201ENST00000070846 MICU3Q86XE3 530 aa13.36□□□□□ -0.27
PKP2-201ENST00000070846 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms