RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 NLRP2Q9NX02 1062 aa9.98□□□□□ -0.81
CDC27-201ENST00000066544 RNMTO43148 476 aaKnown RBP9.97□□□□□ -0.81
CDC27-201ENST00000066544 FAM173BQ6P4H8 233 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 INTS4Q96HW7 963 aaKnown RBP9.97□□□□□ -0.81
CDC27-201ENST00000066544 TSPY26PQ9H489 355 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 TLR7Q9NYK1 1049 aaKnown RBP9.97□□□□□ -0.81
CDC27-201ENST00000066544 AXIN2Q9Y2T1 843 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 AKAP4Q5JQC9 854 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 SUCLG2Q96I99 432 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 G3BP1Q13283 466 aaKnown RBP eCLIP9.97□□□□□ -0.814e-6■□□□□ 9.2
CDC27-201ENST00000066544 ZNF830Q96NB3 372 aaPredicted RBP9.97□□□□□ -0.81
CDC27-201ENST00000066544 GIGYF1O75420 1035 aaPredicted RBP9.97□□□□□ -0.81
CDC27-201ENST00000066544 RBM10P98175 930 aaKnown RBP9.97□□□□□ -0.81
CDC27-201ENST00000066544 LIMCH1Q9UPQ0 1083 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 HSP90AA2PQ14568 343 aaPredicted RBP9.97□□□□□ -0.81
CDC27-201ENST00000066544 HSP90AB4PQ58FF6 505 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 ANKLE2Q86XL3 938 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 DDX17Q92841 729 aaKnown RBP9.97□□□□□ -0.81
CDC27-201ENST00000066544 TOPAZ1Q8N9V7 1692 aa9.97□□□□□ -0.81
CDC27-201ENST00000066544 EAF2Q96CJ1 260 aaPredicted RBP9.96□□□□□ -0.81
CDC27-201ENST00000066544 BICC1Q9H694 974 aaKnown RBP9.96□□□□□ -0.81
CDC27-201ENST00000066544 PDRG1Q9NUG6 133 aa9.96□□□□□ -0.81
CDC27-201ENST00000066544 STX6O43752 255 aa9.96□□□□□ -0.81
CDC27-201ENST00000066544 STK3Q13188 491 aa9.96□□□□□ -0.81
CDC27-201ENST00000066544 HCLS1P14317 486 aaPredicted RBP9.96□□□□□ -0.82
CDC27-201ENST00000066544 KSR2Q6VAB6 950 aa9.96□□□□□ -0.82
CDC27-201ENST00000066544 FSD1Q9BTV5 496 aa9.96□□□□□ -0.82
CDC27-201ENST00000066544 USP25Q9UHP3 1055 aa9.96□□□□□ -0.82
CDC27-201ENST00000066544 SYAP1Q96A49 352 aaPredicted RBP9.96□□□□□ -0.82
CDC27-201ENST00000066544 NALCNQ8IZF0 1738 aa9.96□□□□□ -0.82
CDC27-201ENST00000066544 GJB2P29033 226 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 DNM1Q05193 864 aaKnown RBP9.95□□□□□ -0.82
CDC27-201ENST00000066544 CHGBP05060 677 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 CEMIPQ8WUJ3 1361 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 ZSCAN22P10073 491 aaPredicted RBP9.95□□□□□ -0.82
CDC27-201ENST00000066544 NMIQ13287 307 aaPredicted RBP9.95□□□□□ -0.82
CDC27-201ENST00000066544 KCNH5Q8NCM2 988 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 RUFY2Q8WXA3 655 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 GPATCH3Q96I76 525 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 TAF6LQ9Y6J9 622 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
CDC27-201ENST00000066544 GIMAP6Q6P9H5 292 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 BABAM1Q9NWV8 329 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 RBM8AQ9Y5S9 174 aaKnown RBP9.95□□□□□ -0.82
CDC27-201ENST00000066544 GRM8O00222 908 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 CABLES1Q8TDN4 633 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 NWD1Q149M9 1564 aa9.95□□□□□ -0.82
CDC27-201ENST00000066544 FMN2Q9NZ56 1722 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 PPFIA3O75145 1194 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 SASH1O94885 1247 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 TTC14Q96N46 770 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 CYP46A1Q9Y6A2 500 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 AOX1Q06278 1338 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 ATP5J2-PTCD1G3V325 749 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 PTCD1O75127 700 aaKnown RBP9.94□□□□□ -0.82
CDC27-201ENST00000066544 FOSBP53539 338 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 MYD88Q99836 296 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 KIF13AQ9H1H9 1805 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 TCHHQ07283 1943 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 ZKSCAN1P17029 563 aaPredicted RBP9.94□□□□□ -0.82
CDC27-201ENST00000066544 NFATC2IPQ8NCF5 419 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 XAGE3Q8WTP9 111 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 DNTTIP2Q5QJE6 756 aaKnown RBP9.94□□□□□ -0.82
CDC27-201ENST00000066544 COPS6Q7L5N1 327 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.94□□□□□ -0.82
CDC27-201ENST00000066544 RPAP1Q9BWH6 1393 aaPredicted RBP9.94□□□□□ -0.82
CDC27-201ENST00000066544 KAZALD1Q96I82 304 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 PDLIM2Q96JY6 352 aa9.94□□□□□ -0.82
CDC27-201ENST00000066544 A0A0D9SFI3 127 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 CHRNA2Q15822 529 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 C17orf53Q8N3J3 647 aaPredicted RBP9.93□□□□□ -0.82
CDC27-201ENST00000066544 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.93□□□□□ -0.82
CDC27-201ENST00000066544 PXDNQ92626 1479 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 F13A1P00488 732 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 EPHA10Q5JZY3 1008 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 ARHGEF25Q86VW2 580 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 RAPGEF4Q8WZA2 1011 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 HYPKQ9NX55 129 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 ME3Q16798 604 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 LINS1Q8NG48 757 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 TFIP11Q9UBB9 837 aaKnown RBP9.93□□□□□ -0.82
CDC27-201ENST00000066544 DDX58O95786 925 aaKnown RBP9.93□□□□□ -0.82
CDC27-201ENST00000066544 AMOTQ4VCS5 1084 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 FAM13BQ9NYF5 915 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 ZKSCAN5Q9Y2L8 839 aa9.93□□□□□ -0.82
CDC27-201ENST00000066544 DNAJC2Q99543 621 aaKnown RBP9.92□□□□□ -0.82
CDC27-201ENST00000066544 NOL7Q9UMY1 257 aaKnown RBP9.92□□□□□ -0.82
CDC27-201ENST00000066544 CCDC171Q6TFL3 1326 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 OFD1O75665 1012 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 HOXB7P09629 217 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 CREB3L3Q68CJ9 461 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 KRT28Q7Z3Y7 464 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 TTC41PQ6P2S7 1318 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 ARHGAP23Q9P227 1491 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 ALDH1L1O75891 902 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 IGKV5-2P06315 115 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 NEXNQ0ZGT2 675 aa9.92□□□□□ -0.82
CDC27-201ENST00000066544 TTC12Q9H892 705 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms