RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TCP11L1Q9NUJ3 509 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 CCDC38Q502W7 563 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 TTC39AQ5SRH9 613 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 TBC1D5Q92609 795 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 VCXQ9H320 206 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 PPFIA3O75145 1194 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 UBE2HP62256 183 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 ERMNQ8TAM6 284 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 NUMA1Q14980 2115 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 NBPF1Q3BBV0 1214 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 ZGPATQ8N5A5 531 aaKnown RBP6.98□□□□□ -1.29
VPS13D-201ENST00000011700 CTNNBL1Q8WYA6 563 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-201ENST00000011700 NEUROD6Q96NK8 337 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 CSRNP2Q9H175 543 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 GOLGA1Q92805 767 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 SMARCC1Q92922 1105 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-201ENST00000011700 KRT222Q8N1A0 295 aa6.98□□□□□ -1.29
VPS13D-201ENST00000011700 TTC21BQ7Z4L5 1316 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 TACC1O75410 805 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 BAG4O95429 457 aaKnown RBP6.97□□□□□ -1.29
VPS13D-201ENST00000011700 RASSF2P50749 326 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 KCNG1Q9UIX4 513 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 GCC2Q8IWJ2 1684 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 A0A1B0GUA9 196 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 RAB3IL1Q8TBN0 382 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 CUL5Q93034 780 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 ERBINQ96RT1 1412 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 ZMYM3Q14202 1370 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 BACH2Q9BYV9 841 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 GLT8D2Q9H1C3 349 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 STARD3NLO95772 234 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 CCDC27Q2M243 656 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 TAOK1Q7L7X3 1001 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 CPSF2Q9P2I0 782 aaKnown RBP6.97□□□□□ -1.29
VPS13D-201ENST00000011700 LARP1Q6PKG0 1096 aaKnown RBP6.97□□□□□ -1.29
VPS13D-201ENST00000011700 OSCARQ8IYS5 282 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 NCAPGQ9BPX3 1015 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 GMNNO75496 209 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 SPECC1Q5M775 1068 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 TEX13AQ9BXU3 409 aaPredicted RBP6.97□□□□□ -1.29
VPS13D-201ENST00000011700 ANAPC4Q9UJX5 808 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 RAD21O60216 631 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 PPFIA2O75334 1257 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 SURF6O75683 361 aaKnown RBP6.97□□□□□ -1.29
VPS13D-201ENST00000011700 KIAA0753Q2KHM9 967 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 AFAP1L2Q8N4X5 818 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 CALML4Q96GE6 196 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 FIBPO43427 364 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 DUSP27Q5VZP5 1158 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 ARHGAP24Q8N264 748 aa6.97□□□□□ -1.29
VPS13D-201ENST00000011700 PLXNC1O60486 1568 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 APAF1O14727 1248 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 CHD1LQ86WJ1 897 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 HSF2BPO75031 334 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 CTNNA2P26232 953 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 PODNQ7Z5L7 613 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 RSRC1Q96IZ7 334 aaKnown RBP6.96□□□□□ -1.29
VPS13D-201ENST00000011700 RBM28Q9NW13 759 aaKnown RBP6.96□□□□□ -1.29
VPS13D-201ENST00000011700 GAS8O95995 478 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 ZBTB17Q13105 803 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 MAP3K21Q5TCX8 1036 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 KCNG4Q8TDN1 519 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 IL16Q14005 1332 aa6.96□□□□□ -1.29
VPS13D-201ENST00000011700 LNPKQ9C0E8 428 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 CTAGE9A4FU28 777 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 NBPF7P0C2Y1 421 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-201ENST00000011700 KRT83P78385 493 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 PPFIA1Q13136 1202 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 SPTY2D1Q68D10 685 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-201ENST00000011700 GBP6Q6ZN66 633 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 FEZ2Q9UHY8 353 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-201ENST00000011700 CNNM1Q9NRU3 951 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 VCX3BQ9H321 246 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 THEMISQ8N1K5 641 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-201ENST00000011700 TMOD4Q9NZQ9 345 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 ARHGEF12Q9NZN5 1544 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 MIPOL1Q8TD10 442 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 TRAK1Q9UPV9 953 aa6.96□□□□□ -1.3
VPS13D-201ENST00000011700 BICDL2A1A5D9 508 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 CYLC1P35663 651 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-201ENST00000011700 IGHMBP2P38935 993 aaKnown RBP6.95□□□□□ -1.3
VPS13D-201ENST00000011700 DZIP1Q86YF9 867 aaKnown RBP6.95□□□□□ -1.3
VPS13D-201ENST00000011700 KRT86O43790 486 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 NUP160Q12769 1436 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 RPGRIP1Q96KN7 1286 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 TROQ12816 1431 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-201ENST00000011700 GOLGA8QA0A0J9YX86 632 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 GOLGA8OA6NCC3 632 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 GOLGA8NF8WBI6 632 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 BUB1BO60566 1050 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-201ENST00000011700 GNAQP50148 359 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 CNNM2Q9H8M5 875 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 TATP17735 454 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-201ENST00000011700 TWISTNBQ3B726 338 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-201ENST00000011700 STMN1P16949 149 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 GBP1P32455 592 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 MCM4P33991 863 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 CAVIN4Q5BKX8 364 aa6.95□□□□□ -1.3
VPS13D-201ENST00000011700 GPR161Q8N6U8 529 aaKnown RBP6.95□□□□□ -1.3
VPS13D-201ENST00000011700 RAB3IPQ96QF0 476 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms