RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Ccdc47Q9D024 483 aaKnown RBP12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Myom2Q14BI5 1463 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Rims1Q99NE5 1463 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Cops6O88545 324 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Fsd2Q8BZ52 692 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Egfem1Q8C088 590 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Dbndd1Q9CZ00 160 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Odf2lQ9D478 642 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Zmym3Q9JLM4 1370 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Catsper2A2ARP9 588 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Gm7347D3YYI9 267 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Speer4aF8VPX6 267 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Ppp1r21Q3TDD9 780 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Dcaf5Q80T85 946 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 RestQ8VIG1 1082 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Prl7d1P04769 244 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Atp2b3Q0VF55 1220 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Ehmt1Q5DW34 1296 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Zkscan1Q8BGS3 561 aaKnown RBP12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Kdm2bQ6P1G2 1309 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Mum1Q6DID5 682 aa12.8□□□□□ -0.36
Msh3-202ENSMUST00000185852 Zcchc11B2RX14 1644 aaKnown RBP12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Abca9Q8K449 1623 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Ccdc85cE9Q6B2 420 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Terf1P70371 421 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Hspa1lP16627 641 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Chl1P70232 1209 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Cavin2Q63918 418 aaKnown RBP12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Esco1Q69Z69 843 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Ppp1r9bQ6R891 817 aaKnown RBP12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Rbm17Q8JZX4 405 aaKnown RBP12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 ParvgQ9ERD8 331 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Mmp8O70138 465 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 AnlnQ8K298 1121 aaKnown RBP12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Foxp4Q9DBY0 795 aaKnown RBP12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Sil1Q9EPK6 465 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 Hdac6Q9Z2V5 1149 aa12.79□□□□□ -0.36
Msh3-202ENSMUST00000185852 RereQ80TZ9 1558 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 ArsiQ32KI9 573 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Pla2g4fQ50L41 855 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Zbtb1Q91VL9 713 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 CltaO08585 235 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Brinp3Q499E0 766 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Gm12185Q5NCB2 835 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Tmem87bQ8BKU8 555 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Mlh1Q9JK91 760 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Ces1hD3Z298 562 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 NapbP28663 298 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 LifrP42703 1092 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Gimap8Q75N62 688 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Rhot2Q8JZN7 620 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 RarsQ9D0I9 660 aaKnown RBP12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Ccdc39Q9D5Y1 937 aa12.78□□□□□ -0.36
Msh3-202ENSMUST00000185852 Kiaa0753Q6A000 959 aa12.77□□□□□ -0.36
Msh3-202ENSMUST00000185852 Cchcr1Q8K2I2 770 aa12.77□□□□□ -0.36
Msh3-202ENSMUST00000185852 Erc1Q99MI1 1120 aa12.77□□□□□ -0.36
Msh3-202ENSMUST00000185852 Popdc2Q9ES82 367 aa12.77□□□□□ -0.36
Msh3-202ENSMUST00000185852 Uggt1Q6P5E4 1551 aa12.77□□□□□ -0.36
Msh3-202ENSMUST00000185852 Plekhg1F6S200 1446 aa12.77□□□□□ -0.37
Msh3-202ENSMUST00000185852 Nyap1Q6PFX7 833 aa12.77□□□□□ -0.37
Msh3-202ENSMUST00000185852 Cdhr2E9Q7P9 1308 aa12.77□□□□□ -0.37
Msh3-202ENSMUST00000185852 CltcQ68FD5 1675 aaKnown RBP12.77□□□□□ -0.37
Msh3-202ENSMUST00000185852 Pknox2Q8BG99 474 aa12.77□□□□□ -0.37
Msh3-202ENSMUST00000185852 Emilin2Q8K482 1074 aa12.77□□□□□ -0.37
Msh3-202ENSMUST00000185852 Znf335A2A5K6 1337 aa12.77□□□□□ -0.37
Msh3-202ENSMUST00000185852 Rbm8a2A0A0N4SUH6 174 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Cfap99A0A140LIX9 648 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Pm20d1Q8C165 503 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Rbm8aQ9CWZ3 174 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Dmrtc1Q9D9R7 182 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 IkQ9Z1M8 557 aaKnown RBP12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Letm1Q9Z2I0 738 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 KdrP35918 1367 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Clasp1Q80TV8 1535 aaKnown RBP12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Zkscan8Q8BSL0 588 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Krt25Q8VCW2 446 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Tpm3-rs7D3Z2H9 248 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Myl3P09542 204 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Kdm5aQ3UXZ9 1690 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Gripap1Q8VD04 806 aa12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Ncoa5Q91W39 579 aaKnown RBP12.76□□□□□ -0.37
Msh3-202ENSMUST00000185852 Dnai2A2AC93 623 aa12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 Plekho1Q9JIY0 408 aa12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 Dusp9Q7TNL7 452 aa12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 Rec8Q8C5S7 591 aa12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 RtcbQ99LF4 505 aaKnown RBP12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 Mrps25Q9D125 171 aaKnown RBP12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 Lonrf3Q9D4H7 753 aa12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 Stox1B2RQL2 990 aa12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 Nucb1Q02819 459 aaKnown RBP12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 Abtb2Q7TQI7 1024 aa12.75□□□□□ -0.37
Msh3-202ENSMUST00000185852 Ncapd2Q8K2Z4 1392 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Samm50Q8BGH2 469 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Gdpd2Q9ESM6 539 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Jdp2P97875 163 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Ppp1r37Q8BKR5 712 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Sel1lQ9Z2G6 790 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Tmem2Q5FWI3 1383 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Cnksr1A2A9K7 700 aa12.74□□□□□ -0.37
Msh3-202ENSMUST00000185852 Ppfia1B2RXQ2 1266 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms