RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Anp32cQ64G17 123 aa13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Zscan22Q8BGS5 496 aa13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Adcy5P84309 1262 aa13.77□□□□□ -0.2
Vps54-202ENSMUST00000109578 Utp3Q9JI13 469 aaKnown RBP13.77□□□□□ -0.2
Vps54-202ENSMUST00000109578 Dlg5E9Q9R9 1921 aa13.77□□□□□ -0.21
Vps54-202ENSMUST00000109578 Rbm8a2A0A0N4SUH6 174 aa13.77□□□□□ -0.21
Vps54-202ENSMUST00000109578 Irf5P56477 497 aa13.77□□□□□ -0.21
Vps54-202ENSMUST00000109578 Bach2P97303 839 aa13.77□□□□□ -0.21
Vps54-202ENSMUST00000109578 Rad17Q6NXW6 688 aa13.77□□□□□ -0.21
Vps54-202ENSMUST00000109578 Rbm8aQ9CWZ3 174 aa13.77□□□□□ -0.21
Vps54-202ENSMUST00000109578 Zfp51Q3U4L8 781 aa13.77□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ccdc66Q6NS45 935 aa13.77□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ppp1r37Q8BKR5 712 aa13.77□□□□□ -0.21
Vps54-202ENSMUST00000109578 Abcc4E9Q236 1325 aa13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ube2hP62257 183 aa13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 Slc26a8Q8R0C3 999 aa13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 Wdr24Q8CFJ9 790 aa13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ak2Q9WTP6 239 aa13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 MyclP10166 368 aa13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 Lmbr1lQ9D1E5 489 aa13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ugt1a5B2RT14 529 aa13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 Tex2Q6ZPJ0 1128 aaKnown RBP13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 SympkQ80X82 1284 aa13.76□□□□□ -0.21
Vps54-202ENSMUST00000109578 Aox2Q5SGK3 1345 aa13.75□□□□□ -0.21
Vps54-202ENSMUST00000109578 CgnP59242 1191 aa13.75□□□□□ -0.21
Vps54-202ENSMUST00000109578 Sgsm2Q80U12 1005 aa13.75□□□□□ -0.21
Vps54-202ENSMUST00000109578 Polr3dQ91WD1 398 aa13.75□□□□□ -0.21
Vps54-202ENSMUST00000109578 Irf9Q61179 399 aa13.75□□□□□ -0.21
Vps54-202ENSMUST00000109578 PsapQ61207 557 aaKnown RBP13.75□□□□□ -0.21
Vps54-202ENSMUST00000109578 Nphp3Q7TNH6 1325 aa13.75□□□□□ -0.21
Vps54-202ENSMUST00000109578 Mdm2P23804 489 aa13.75□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ddx11Q6AXC6 880 aa13.75□□□□□ -0.21
Vps54-202ENSMUST00000109578 Gm10471E9Q1C7 252 aa13.74□□□□□ -0.21
Vps54-202ENSMUST00000109578 Grm8P47743 908 aa13.74□□□□□ -0.21
Vps54-202ENSMUST00000109578 Tbc1d30Q69ZT9 766 aa13.74□□□□□ -0.21
Vps54-202ENSMUST00000109578 Cfap73J3QPZ5 306 aa13.74□□□□□ -0.21
Vps54-202ENSMUST00000109578 MecomP14404 1042 aa13.74□□□□□ -0.21
Vps54-202ENSMUST00000109578 Snx13Q6PHS6 957 aa13.74□□□□□ -0.21
Vps54-202ENSMUST00000109578 Kcnb2A6H8H5 907 aa13.73□□□□□ -0.21
Vps54-202ENSMUST00000109578 Cnnm3Q32NY4 713 aa13.73□□□□□ -0.21
Vps54-202ENSMUST00000109578 Med4Q9CQA5 270 aa13.73□□□□□ -0.21
Vps54-202ENSMUST00000109578 Mx2Q9WVP9 655 aa13.73□□□□□ -0.21
Vps54-202ENSMUST00000109578 Fmnl2A2APV2 1086 aa13.73□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ttll7A4Q9F0 912 aa13.73□□□□□ -0.21
Vps54-202ENSMUST00000109578 Hoxa7P02830 229 aa13.73□□□□□ -0.21
Vps54-202ENSMUST00000109578 Polr3gQ6NXY9 223 aa13.73□□□□□ -0.21
Vps54-202ENSMUST00000109578 Cchcr1Q8K2I2 770 aa13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 Sf3a1Q8K4Z5 791 aaKnown RBP13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 TimelessQ9R1X4 1197 aa13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 Kdm6aO70546 1401 aa13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ncoa4Q5U4H9 625 aa13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 Bag3Q9JLV1 577 aaKnown RBP13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 Atp10bB1AWN4 1474 aa13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ccdc173A0JLY1 547 aa13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 Sp8Q8BMJ8 486 aa13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 Nup88Q8CEC0 753 aaKnown RBP13.72□□□□□ -0.21
Vps54-202ENSMUST00000109578 Fam184aE9PW83 1143 aa13.71□□□□□ -0.21
Vps54-202ENSMUST00000109578 AceP09470 1312 aa13.71□□□□□ -0.21
Vps54-202ENSMUST00000109578 Flt4P35917 1363 aa13.71□□□□□ -0.21
Vps54-202ENSMUST00000109578 Abcc12Q80WJ6 1366 aa13.71□□□□□ -0.21
Vps54-202ENSMUST00000109578 Neurod6P48986 337 aa13.71□□□□□ -0.21
Vps54-202ENSMUST00000109578 Gimap6Q8K349 305 aa13.71□□□□□ -0.21
Vps54-202ENSMUST00000109578 Pdia6Q922R8 440 aaKnown RBP13.71□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ndufa8Q9DCJ5 172 aa13.71□□□□□ -0.21
Vps54-202ENSMUST00000109578 C3P01027 1663 aa13.71□□□□□ -0.21
Vps54-202ENSMUST00000109578 Ubxn10Q8BG34 277 aa13.71□□□□□ -0.22
Vps54-202ENSMUST00000109578 Dmrt2Q8BG36 561 aa13.71□□□□□ -0.22
Vps54-202ENSMUST00000109578 Slc39a6Q8C145 765 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Kcnh5Q920E3 988 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Mmel1Q9JLI3 765 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 NcapgE9PWG6 1004 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Hvcn1Q3U2S8 269 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Mst1rQ62190 1378 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Serpina10Q8R121 448 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Taf7Q9R1C0 341 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Eef2kO08796 724 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Esyt1Q3U7R1 1092 aaKnown RBP13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Pdzd9Q9D9M4 266 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Spata31d1bE9QA57 1361 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Tmem2Q5FWI3 1383 aa13.7□□□□□ -0.22
Vps54-202ENSMUST00000109578 Nfat5Q9WV30 1534 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Prkab2Q6PAM0 271 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Dhx38Q80X98 1228 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 NaspQ99MD9 773 aaKnown RBP13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Brpf3B2KF05 1204 aaKnown RBP13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Ppfia3P60469 1194 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Adora1Q60612 326 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Me3Q8BMF3 604 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Tmem119Q8R138 280 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Kiaa0232Q80U59 1396 aaKnown RBP13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Evi5lH3BKQ3 813 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Cavin1O54724 392 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Zfp113Q8C689 439 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Nfe2l3Q9WTM4 660 aa13.69□□□□□ -0.22
Vps54-202ENSMUST00000109578 Eif3aP23116 1344 aaKnown RBP13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 HellsQ60848 821 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 Nap1l3Q794H2 544 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 LratQ9JI60 231 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 Leo1Q5XJE5 667 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 GphnQ8BUV3 769 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms