RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Spocd1B1ASB6 936 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Polr3aB2RXC6 1390 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Anapc15-psA0A140T8L6 141 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ankrd44B2RXR6 993 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Cdcp1Q5U462 833 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ankrd40Q5SUE8 363 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ccdc66Q6NS45 935 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Klhl10Q9D5V2 608 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Pmfbp1Q9WVQ0 1022 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Kdm5bQ80Y84 1544 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ufl1Q8CCJ3 793 aaKnown RBP10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Pik3ap1Q9EQ32 811 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Gm1043A0A140LJC2 1431 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Nfxl1E9Q8I7 918 aaKnown RBP10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 MybP06876 636 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Capn12Q9ER56 720 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ripk4Q9ERK0 786 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Mlh1Q9JK91 760 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Zeb2Q9R0G7 1215 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ptch1Q61115 1434 aa10.19□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Psmd1Q3TXS7 953 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Arglu1Q3UL36 271 aaKnown RBP10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Gnat3Q3V3I2 354 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Smc2Q8CG48 1191 aaKnown RBP10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Luc7lQ9CYI4 371 aaKnown RBP10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Glg1Q61543 1175 aaKnown RBP10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ddx58Q6Q899 926 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Pla2g4fQ50L41 855 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Cep55Q8BT07 462 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Phldb2Q8K1N2 1249 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Gm42641I6L9G2 585 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 AtripQ8BMG1 785 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Naip5Q9R016 1403 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Slc4a4O88343 1079 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Spag5Q7TME2 1165 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Tsr2Q8C8T8 191 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Bicc1Q99MQ1 977 aaKnown RBP10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Gapvd1Q6PAR5 1458 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Pde1cQ64338 706 aa10.18□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Cct4P80315 539 aaKnown RBP10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Trim27Q62158 513 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ccdc83Q9D4V3 305 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Fancd2Q80V62 1450 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ttc12Q8BW49 704 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 DymQ8CHY3 669 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Nol7Q9D7Z3 254 aaKnown RBP10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Znf518aB2RRF6 1478 aaKnown RBP10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Top2bQ64511 1612 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ddb1Q3U1J4 1140 aaKnown RBP10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 CenpqQ9CPQ5 267 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 DmtnQ9WV69 405 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Hoxc9P09633 260 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Bach1P97302 739 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Rhot2Q8JZN7 620 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Cnot6lQ8VEG6 555 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Cdk13Q69ZA1 1511 aaKnown RBP10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Timm10P62073 90 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Popdc2Q9ES82 367 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Gdpd2Q9ESM6 539 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Disp1Q3TDN0 1521 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Large2Q5XPT3 690 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Myl10Q62082 202 aa10.17□□□□□ -0.78
Ttc28-201ENSMUST00000040111 ImmtQ8CAQ8 757 aaKnown RBP10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Usp5P56399 858 aaKnown RBP10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Lamc3Q9R0B6 1581 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ca8P28651 291 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Frat2Q8K025 231 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 MicalclQ9D5U9 680 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Rbbp8nlA2ABX0 614 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Zscan29E9Q5B4 869 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Mdh1bQ5F204 500 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Islr2Q5RKR3 745 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Cep120Q7TSG1 988 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 PicalmQ7M6Y3 660 aaKnown RBP10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Slc35g1Q8BY79 368 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Cep57l1Q8VDS7 400 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Jdp2P97875 163 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Slx4ipQ9D7Y9 413 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Slc7a3P70423 618 aa10.16□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ncoa1P70365 1447 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Kcnj4P52189 445 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Map3k7clP58500 142 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Smc5Q8CG46 1101 aaKnown RBP10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Uba5Q8VE47 403 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Stim1P70302 685 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ttll12Q3UDE2 639 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Sgsm1Q8BPQ7 1093 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Tmx4Q8C0L0 335 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Pip4k2aO70172 405 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Fam135aQ6NS59 1506 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Prrc2bQ7TPM1 1486 aaKnown RBP10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Jakmip2D3YXK0 820 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Uspl1Q3ULM6 1089 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 TrhQ62361 256 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Sestd1Q80UK0 696 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 GlmnQ8BZM1 596 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 TxlnbQ8VBT1 685 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Tex19.1Q99MV2 351 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Map9Q3TRR0 646 aa10.15□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ift122Q6NWV3 1182 aa10.15□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms