RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 PLOD2O00469 737 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 CPSF4O95639 269 aaKnown RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 TBX6O95947 436 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 MT-ND1P03886 318 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 SEMG1P04279 462 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ALPLP05186 524 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ST6GAL1P15907 406 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 DDX5P17844 614 aaKnown RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 GSTM2P28161 218 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 RBMS1P29558 406 aaKnown RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 KDELR2P33947 212 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 PCGF2P35227 344 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 NR1H2P55055 460 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 PPP1CAP62136 330 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 GABREP78334 506 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 EPS8Q12929 822 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ELOAQ14241 798 aaKnown RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ZNF385BQ569K4 471 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 C3orf38Q5JPI3 329 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ZNF425Q6IV72 752 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ANKRD26P1Q6NSI1 321 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 BORAQ6PGQ7 559 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 FIGLAQ6QHK4 219 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 TBPL2Q6SJ96 375 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 CBLL1Q75N03 491 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 RNF44Q7L0R7 432 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 EIF3MQ7L2H7 374 aaKnown RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 PATL1Q86TB9 770 aaKnown RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 TBC1D19Q8N5T2 526 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 FAM47BQ8NA70 645 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ZNF740Q8NDX6 193 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 OR5K1Q8NHB7 308 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 CDC26Q8NHZ8 85 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 PPCDCQ96CD2 204 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 THAP11Q96EK4 314 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 RMND5BQ96G75 393 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ZNF578Q96N58 590 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 QRFPRQ96P65 431 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 SARGQ9BW04 601 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 FAM117AQ9C073 453 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 CLK4Q9HAZ1 481 aaKnown RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 MRPS30Q9NP92 439 aaKnown RBP9.7□□□□□ -0.86
PHGDH-224ENST00000641711 TMEM184CQ9NVA4 438 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 SH3BP4Q9P0V3 963 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 KLHL3Q9UH77 587 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 TAC3Q9UHF0 121 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ADAM29Q9UKF5 820 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 SNX7Q9UNH6 387 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 SATB2Q9UPW6 733 aa9.7□□□□□ -0.86
PHGDH-224ENST00000641711 ANKRD11Q6UB99 2663 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 MED19A0JLT2 244 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 ANKDD1BA6NHY2 528 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 SLC9B1P1A6NJY1 282 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 EFCAB7A8K855 629 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 CDRT15L2A8MXV6 281 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 KIF1CO43896 1103 aaKnown RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 CST1P01037 141 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 KLK1P06870 262 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 THRBP10828 461 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 FGF5P12034 268 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 MAGP20916 626 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 TPP2P29144 1249 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 ALDH3B2P48448 385 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 CLDN6P56747 220 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 PPP2R2BQ00005 443 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 MEF2AQ02078 507 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 RBBP4Q09028 425 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 C2orf80Q0P641 193 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 FADDQ13158 208 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 GAB1Q13480 694 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 RGNQ15493 299 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 SDK2Q58EX2 2172 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 TCTE1Q5JU00 501 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 SNAP47Q5SQN1 464 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 DCAF12Q5T6F0 453 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 YOD1Q5VVQ6 348 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 KHDRBS2Q5VWX1 349 aaKnown RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 TMEM214Q6NUQ4 689 aaKnown RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 PAGE2Q7Z2X7 111 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 PIWIL3Q7Z3Z3 882 aaKnown RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 PPP1R3BQ86XI6 285 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 HIPK1Q86Z02 1210 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 TRIML2Q8N7C3 387 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 RCBTB1Q8NDN9 531 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 TSPAN14Q8NG11 270 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 TTLQ8NG68 377 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 OR52N2Q8NGI0 321 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 OR4A15Q8NGL6 344 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 MAGEE2Q8TD90 523 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 ADAMTS16Q8TE57 1224 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 SDCCAG3Q96C92 435 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 SLC46A1Q96NT5 459 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 RBM4BQ9BQ04 359 aaKnown RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 RBM4Q9BWF3 364 aaKnown RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 ZNF717Q9BY31 904 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-224ENST00000641711 GABARAPL1Q9H0R8 117 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 RAD21L1Q9H4I0 556 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 IL1RAPQ9NPH3 570 aa9.69□□□□□ -0.86
PHGDH-224ENST00000641711 ASCL3Q9NQ33 180 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms