RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TTMPQ5BVD1 217 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 HDXQ7Z353 690 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 ZNF227Q86WZ6 799 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 FAM76AQ8TAV0 307 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 SIGLEC12Q96PQ1 595 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 SH3GL2Q99962 352 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 ILKAPQ9H0C8 392 aaPredicted RBP24.81■■□□□ 1.56
VEGFA-231ENST00000640499 CXorf21Q9HAI6 301 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 LRTM1Q9HBL6 345 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 SLAMF7Q9NQ25 335 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 C1orf109Q9NX04 203 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 SHANK1Q9Y566 2161 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 GOLGA6L10A6NI86 522 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 RGS14O43566 566 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 ZNF354AO60765 605 aaPredicted RBP24.8■■□□□ 1.56
VEGFA-231ENST00000640499 SEC22BO75396 215 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 ZFAND5O76080 213 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 JUNP05412 331 aaKnown RBP24.8■■□□□ 1.56
VEGFA-231ENST00000640499 PTGER1P34995 402 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 ALDH9A1P49189 494 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 MGAT2Q10469 447 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 ZNF267Q14586 743 aaPredicted RBP24.8■■□□□ 1.56
VEGFA-231ENST00000640499 INPP5JQ15735 1006 aaPredicted RBP24.8■■□□□ 1.56
VEGFA-231ENST00000640499 XKR7Q5GH72 579 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 FAM71E1Q6IPT2 247 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 CISD2Q8N5K1 135 aaKnown RBP24.8■■□□□ 1.56
VEGFA-231ENST00000640499 ZNF781Q8N8C0 355 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 MDS2Q8NDY4 140 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 PPP1R14CQ8TAE6 165 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 RIT1Q92963 219 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 SNRNP40Q96DI7 357 aaKnown RBP24.8■■□□□ 1.56
VEGFA-231ENST00000640499 FBXL20Q96IG2 436 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 METTL2AQ96IZ6 378 aaKnown RBP24.8■■□□□ 1.56
VEGFA-231ENST00000640499 EGLN2Q96KS0 407 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 PAIP2Q9BPZ3 127 aaKnown RBP24.8■■□□□ 1.56
VEGFA-231ENST00000640499 FAIM2Q9BWQ8 316 aa24.8■■□□□ 1.56
VEGFA-231ENST00000640499 CROCCQ5TZA2 2017 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 HELZ2Q9BYK8 2649 aaKnown RBP24.79■■□□□ 1.56
VEGFA-231ENST00000640499 OR10H2O60403 315 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 SASH3O75995 380 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 COX7A2P14406 83 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 DRD2P14416 443 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 PORP16435 677 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-231ENST00000640499 S1PR1P21453 382 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 FEN1P39748 380 aaKnown RBP24.79■■□□□ 1.56
VEGFA-231ENST00000640499 SLC1A6P48664 564 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 ERVK-8P63133 956 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 RNF4P78317 190 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 HHATQ5VTY9 493 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 HSDL2Q6YN16 418 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 C9orf40Q8IXQ3 194 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 DDIASQ8IXT1 998 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 MGARPQ8TDB4 240 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 MIB2Q96AX9 1013 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 PELOQ9BRX2 385 aaKnown RBP24.79■■□□□ 1.56
VEGFA-231ENST00000640499 TRIM45Q9H8W5 580 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-231ENST00000640499 HAO1Q9UJM8 370 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 ERVK-19Q9WJR5 959 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 NBASA2RRP1 2371 aa24.79■■□□□ 1.56
VEGFA-231ENST00000640499 ERAL1O75616 437 aaKnown RBP24.78■■□□□ 1.56
VEGFA-231ENST00000640499 NEURL1O76050 574 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 HSPA4LO95757 839 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 CHEK2O96017 543 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 TRHRP34981 398 aaPredicted RBP24.78■■□□□ 1.56
VEGFA-231ENST00000640499 HK2P52789 917 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 FOXK1P85037 733 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 ZNF763Q0D2J5 394 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 BST1Q10588 318 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 SPINK14Q6IE38 97 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 OR8K3Q8NH51 312 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 CPT1CQ8TCG5 803 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 KLHL29Q96CT2 875 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 BARD1Q99728 777 aaKnown RBP24.78■■□□□ 1.56
VEGFA-231ENST00000640499 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.78■■□□□ 1.563e-8■■□□□ 12.3
VEGFA-231ENST00000640499 VIPAS39Q9H9C1 493 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 MYNNQ9NPC7 610 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 ARGLU1Q9NWB6 273 aaPredicted RBP24.78■■□□□ 1.56
VEGFA-231ENST00000640499 MYOTQ9UBF9 498 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 UTS2RQ9UKP6 389 aa24.78■■□□□ 1.56
VEGFA-231ENST00000640499 TRAV17A0A0B4J275 112 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 ITGA10O75578 1167 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 NEFHP12036 1026 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 GRK2P25098 689 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 SSTR4P31391 388 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 C2orf80Q0P641 193 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 FUT7Q11130 342 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 STX3Q13277 289 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 NR6A1Q15406 480 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 FAM111BQ6SJ93 734 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 SIMC1Q8NDZ2 872 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 UTP23Q9BRU9 249 aaKnown RBP24.77■■□□□ 1.56
VEGFA-231ENST00000640499 CNPPD1Q9BV87 410 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 HES7Q9BYE0 225 aa24.77■■□□□ 1.56
VEGFA-231ENST00000640499 GCN1Q92616 2671 aaKnown RBP24.77■■□□□ 1.56
VEGFA-231ENST00000640499 ATP6AP2A0A1C7CYW4 349 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 SKAP2O75563 359 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-231ENST00000640499 ATP6AP2O75787 350 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 ATP1B1P05026 303 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 SDC1P18827 310 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 CSNK2A2P19784 350 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms