RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 MFGE8Q08431 387 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-216ENST00000640058 ISXQ2M1V0 245 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 ACER2Q5QJU3 275 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 ZNF530Q6P9A1 599 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-216ENST00000640058 GCNT7Q6ZNI0 430 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 Q6ZRG5 221 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 CYP4V2Q6ZWL3 525 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-216ENST00000640058 LAX1Q8IWV1 398 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 OR8H3Q8N146 312 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 SIX6OS1Q8N1H7 587 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 NHLRC2Q8NBF2 726 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 RELL2Q8NC24 303 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-216ENST00000640058 LINC01006Q8NI28 216 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 PNPLA2Q96AD5 504 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 MAGEB18Q96M61 343 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 MLPHQ9BV36 600 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-216ENST00000640058 ADGRL4Q9HBW9 690 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 TIGARQ9NQ88 270 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 SEC14L4Q9UDX3 406 aa3.25□□□□□ -1.89
CCDC7-216ENST00000640058 A0A087X0K7 114 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 IGHV3-35A0A0C4DH35 117 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 SH3PXD2BA1X283 911 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 TRABD2BA6NFA1 517 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 FRG2CA6NGY1 282 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 WDR46O15213 610 aaKnown RBP3.24□□□□□ -1.89
CCDC7-216ENST00000640058 SLC7A4O43246 635 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 PRAMEF12O95522 483 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 GSTA2P09210 222 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 SBK2P0C263 348 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 MAGEB1P43366 347 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 CCR4P51679 360 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 ARHGDIAP52565 204 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 RIPK4P57078 832 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 P2RY14Q15391 338 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 TGIF1Q15583 401 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 KHDRBS2Q5VWX1 349 aaKnown RBP3.24□□□□□ -1.89
CCDC7-216ENST00000640058 PET117Q6UWS5 81 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 TRPV3Q8NET8 790 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 GOT1L1Q8NHS2 421 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-216ENST00000640058 CITED2Q99967 270 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-216ENST00000640058 SRD5A3Q9H8P0 318 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 DNAJB9Q9UBS3 223 aa3.24□□□□□ -1.89
CCDC7-216ENST00000640058 NOL7Q9UMY1 257 aaKnown RBP3.24□□□□□ -1.89
CCDC7-216ENST00000640058 IGHV3OR16-12A0A075B7B8 117 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 WI2-2373I1.2A0A1W2PRP0 233 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 SLC30A4O14863 429 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 NME6O75414 186 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-216ENST00000640058 SCN1BQ07699 218 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 PTK6Q13882 451 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 TYSND1Q2T9J0 566 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 C11orf88Q6PI97 169 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 CRYGNQ8WXF5 182 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 FAF2Q96CS3 445 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 PIWIL1Q96J94 861 aaKnown RBP3.23□□□□□ -1.89
CCDC7-216ENST00000640058 CASD1Q96PB1 797 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 PARK7Q99497 189 aaKnown RBP3.23□□□□□ -1.89
CCDC7-216ENST00000640058 SSX3Q99909 188 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 AGPAT1Q99943 283 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 THUMPD3Q9BV44 507 aaKnown RBP3.23□□□□□ -1.89
CCDC7-216ENST00000640058 ALDH8A1Q9H2A2 487 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-216ENST00000640058 SLC25A19Q9HC21 320 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 NTNG1Q9Y2I2 539 aa3.23□□□□□ -1.89
CCDC7-216ENST00000640058 ZFP37Q9Y6Q3 630 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-216ENST00000640058 FAM170AA1A519 330 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 SLC15A5A6NIM6 579 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 ZFP92A6NM28 416 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 IFIT3O14879 490 aaKnown RBP3.22□□□□□ -1.89
CCDC7-216ENST00000640058 RAD51DO75771 328 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 MUTP22033 750 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 CTNNA1P35221 906 aaKnown RBP3.22□□□□□ -1.89
CCDC7-216ENST00000640058 KRTAP10-1P60331 282 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 MEF2DQ14814 521 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 C2orf66Q6UXQ4 117 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 ADGRD2Q7Z7M1 963 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 ITIH5Q86UX2 942 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 C17orf64Q86WR6 236 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 THEM5Q8N1Q8 247 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 OR2L5Q8NG80 312 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 ULK4Q96C45 1275 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 JAKMIP1Q96N16 626 aaKnown RBP3.22□□□□□ -1.89
CCDC7-216ENST00000640058 OR5M11Q96RB7 305 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 ST6GALNAC5Q9BVH7 336 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 GDF3Q9NR23 364 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 IMPAD1Q9NX62 359 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 KLRF1Q9NZS2 232 aa3.22□□□□□ -1.89
CCDC7-216ENST00000640058 COL4A4P53420 1690 aaPredicted RBP3.22□□□□□ -1.89
CCDC7-216ENST00000640058 EPOPA6NHQ4 379 aa3.21□□□□□ -1.9
CCDC7-216ENST00000640058 CCER2I3L3R5 266 aa3.21□□□□□ -1.9
CCDC7-216ENST00000640058 ATP9AO75110 1047 aa3.21□□□□□ -1.9
CCDC7-216ENST00000640058 DUSP14O95147 198 aaKnown RBP3.21□□□□□ -1.9
CCDC7-216ENST00000640058 SLU7O95391 586 aaKnown RBP3.21□□□□□ -1.9
CCDC7-216ENST00000640058 LAMP1P11279 417 aa3.21□□□□□ -1.9
CCDC7-216ENST00000640058 CKAP4Q07065 602 aaKnown RBP3.21□□□□□ -1.9
CCDC7-216ENST00000640058 OR1C1Q15619 314 aa3.21□□□□□ -1.9
CCDC7-216ENST00000640058 MEP1BQ16820 701 aa3.21□□□□□ -1.9
CCDC7-216ENST00000640058 MICAQ29983 383 aa3.21□□□□□ -1.9
CCDC7-216ENST00000640058 PAN3Q58A45 887 aaKnown RBP3.21□□□□□ -1.9
CCDC7-216ENST00000640058 TATDN1Q6P1N9 297 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms