RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ERVK-8P63133 956 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 ZNF227Q86WZ6 799 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 MIB2Q96AX9 1013 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 EML4Q9HC35 981 aaKnown RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 ASF1BQ9NVP2 202 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 ERVK-19Q9WJR5 959 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 SYNDIG1LA6NDD5 238 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 OR10H2O60403 315 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 ZNF354AO60765 605 aaPredicted RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 ERAL1O75616 437 aaKnown RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 CLPSP04118 112 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 CPMP14384 443 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 COX7A2P14406 83 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 TACR1P25103 407 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 RNF4P78317 190 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 FOXK1P85037 733 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 ZNF267Q14586 743 aaPredicted RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 LGI4Q8N135 537 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 MGARPQ8TDB4 240 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 RIT1Q92963 219 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 CNRIP1Q96F85 164 aaPredicted RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 C3orf30Q96M34 536 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 PAIP2Q9BPZ3 127 aaKnown RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 EXO1Q9UQ84 846 aaKnown RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 GUCY1B2O75343 617 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 SEC22BO75396 215 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 ITGA10O75578 1167 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 NEURL1O76050 574 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 ZFAND5O76080 213 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 SERPINE1P05121 402 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 PRPH2P23942 346 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 SERPINB5P36952 375 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 BIKQ13323 160 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 RFTN2Q52LD8 501 aaPredicted RBP20.23■□□□□ 0.83
SCN1B-206ENST00000638536 NOXRED1Q6NXP6 359 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 HSDL2Q6YN16 418 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 C9orf40Q8IXQ3 194 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 MDS2Q8NDY4 140 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 PPP1R14CQ8TAE6 165 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 EGLN2Q96KS0 407 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 ZNF681Q96N22 645 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 CNPPD1Q9BV87 410 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 CXorf21Q9HAI6 301 aa20.23■□□□□ 0.83
SCN1B-206ENST00000638536 NPIPB8E9PQR5 432 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 WWP2O00308 870 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 SLC28A1O00337 649 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 LSM1O15116 133 aaKnown RBP20.22■□□□□ 0.83
SCN1B-206ENST00000638536 JUNP05412 331 aaKnown RBP20.22■□□□□ 0.83
SCN1B-206ENST00000638536 SSTR4P31391 388 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 HK2P52789 917 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 OR1C1Q15619 314 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 SPRED3Q2MJR0 410 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 RNF165Q6ZSG1 346 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 DDIASQ8IXT1 998 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 ZNF781Q8N8C0 355 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 SIMC1Q8NDZ2 872 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 CDC26Q8NHZ8 85 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 KLHL29Q96CT2 875 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 FBXL20Q96IG2 436 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 TAAR6Q96RI8 345 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 SORT1Q99523 831 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 UTP23Q9BRU9 249 aaKnown RBP20.22■□□□□ 0.83
SCN1B-206ENST00000638536 FAIM2Q9BWQ8 316 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 STMN4Q9H169 189 aaPredicted RBP20.22■□□□□ 0.83
SCN1B-206ENST00000638536 LRTM1Q9HBL6 345 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 MAP10Q9P2G4 905 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 UTS2RQ9UKP6 389 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 HIVEP3Q5T1R4 2406 aa20.22■□□□□ 0.83
SCN1B-206ENST00000638536 TRAV17A0A0B4J275 112 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 GOLGA6L10A6NI86 522 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 RGS14O43566 566 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 SKAP2O75563 359 aaPredicted RBP20.21■□□□□ 0.83
SCN1B-206ENST00000638536 OR2J2O76002 312 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 PORP16435 677 aaPredicted RBP20.21■□□□□ 0.83
SCN1B-206ENST00000638536 ABCE1P61221 599 aaKnown RBP20.21■□□□□ 0.83
SCN1B-206ENST00000638536 OC90Q02509 493 aaPredicted RBP20.21■□□□□ 0.83
SCN1B-206ENST00000638536 ZNF763Q0D2J5 394 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 NR6A1Q15406 480 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 FAM111BQ6SJ93 734 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 ADCY4Q8NFM4 1077 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 KLHL1Q9NR64 748 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 C1orf109Q9NX04 203 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 LRFN1Q9P244 771 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 MYOTQ9UBF9 498 aa20.21■□□□□ 0.83
SCN1B-206ENST00000638536 ATP6AP2A0A1C7CYW4 349 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 PRAMEF2O60811 474 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 ATP6AP2O75787 350 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 CHEK2O96017 543 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 S1PR1P21453 382 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 NT5EP21589 574 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 GALNSP34059 522 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 SLC37A1P57057 533 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 C2orf80Q0P641 193 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 MGAT2Q10469 447 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 LTB4RQ15722 352 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 GALNTL6Q49A17 601 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 TTMPQ5BVD1 217 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 XKR7Q5GH72 579 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 FAM71E1Q6IPT2 247 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms