RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 RHOXF1Q8NHV9 184 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 BMFQ96LC9 184 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 ZNF624Q9P2J8 865 aaPredicted RBP20.34■□□□□ 0.85
CLN6-224ENST00000638076 SEC14L3Q9UDX4 400 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 SNX7Q9UNH6 387 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 EYSQ5T1H1 3165 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 GOLGA4Q13439 2230 aaKnown RBP20.33■□□□□ 0.85
CLN6-224ENST00000638076 TRBV23OR9-2A0A075B6M9 112 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 GUCY1B2O75343 617 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 AIFM1O95831 613 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 KCNJ5P48544 419 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 PRKAG1P54619 331 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 MVKQ03426 396 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 GPR19Q15760 415 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 TMEM31Q5JXX7 168 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 C18orf63Q68DL7 685 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 VANGL1Q8TAA9 524 aaPredicted RBP20.33■□□□□ 0.85
CLN6-224ENST00000638076 CNRIP1Q96F85 164 aaPredicted RBP20.33■□□□□ 0.85
CLN6-224ENST00000638076 OTUB1Q96FW1 271 aaPredicted RBP20.33■□□□□ 0.85
CLN6-224ENST00000638076 ZNF354BQ96LW1 612 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 WDR92Q96MX6 357 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 SIGLEC11Q96RL6 698 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 NMNAT1Q9HAN9 279 aaPredicted RBP20.33■□□□□ 0.85
CLN6-224ENST00000638076 CCDC88CQ9P219 2028 aa20.33■□□□□ 0.85
CLN6-224ENST00000638076 FAM227AF5H4B4 570 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 SEMA7AO75326 666 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 NR2F1P10589 423 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 ACTR1BP42025 376 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 ACTR1AP61163 376 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 TJAP1Q5JTD0 557 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 TCTN3Q6NUS6 607 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 CCDC116Q8IYX3 515 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 SRFBP1Q8NEF9 429 aaKnown RBP20.33■□□□□ 0.84
CLN6-224ENST00000638076 SUN3Q8TAQ9 357 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 FCRL4Q96PJ5 515 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 AMBNQ9NP70 447 aa20.33■□□□□ 0.84
CLN6-224ENST00000638076 TRBV4-1A0A0J9YWV2 114 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 ARRDC5A6NEK1 342 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 BTN3A3O00478 584 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 ASGR2P07307 311 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 C8orf89P0DMQ9 161 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 NDUFS1P28331 727 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 DUSP2Q05923 314 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 DEF8Q6ZN54 512 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 RBM45Q8IUH3 476 aaKnown RBP20.32■□□□□ 0.84
CLN6-224ENST00000638076 PARP8Q8N3A8 854 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 DENND6BQ8NEG7 585 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 RASSF5Q8WWW0 418 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 WFDC6Q9BQY6 131 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 YIPF4Q9BSR8 244 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 COPS4Q9BT78 406 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 TMEM168Q9H0V1 697 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 ZNF226Q9NYT6 803 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 KLF15Q9UIH9 416 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 SERPINB7O75635 380 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 GABARAPO95166 117 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 NDUFV2P19404 249 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 ARFIP1P53367 373 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 ZNF770Q6IQ21 691 aaPredicted RBP20.32■□□□□ 0.84
CLN6-224ENST00000638076 KLHL17Q6TDP4 642 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 TMEM92Q6UXU6 159 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 ARHGAP22Q7Z5H3 698 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 OR4D11Q8NGI4 311 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 YIPF6Q96EC8 236 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 SRMSQ9H3Y6 488 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 KCNK12Q9HB15 430 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 SEMA3GQ9NS98 782 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 PLCXD1Q9NUJ7 323 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 PSORS1C1Q9UIG5 152 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 ENTPD4Q9Y227 616 aa20.32■□□□□ 0.84
CLN6-224ENST00000638076 A0A1W2PS29 197 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 DRD1P21728 446 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 PPP2R1BP30154 601 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 FEN1P39748 380 aaKnown RBP20.31■□□□□ 0.84
CLN6-224ENST00000638076 ST13P50502 369 aaKnown RBP20.31■□□□□ 0.84
CLN6-224ENST00000638076 STXBP1P61764 594 aaKnown RBP20.31■□□□□ 0.84
CLN6-224ENST00000638076 PTGES3Q15185 160 aaKnown RBP20.31■□□□□ 0.84
CLN6-224ENST00000638076 SLC48A1Q6P1K1 146 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 OLIG3Q7RTU3 272 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 PAQR7Q86WK9 346 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 DEPDC4Q8N2C3 294 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 CES1P1Q9UKY3 287 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 GPC6Q9Y625 555 aaPredicted RBP20.31■□□□□ 0.84
CLN6-224ENST00000638076 DNAH14Q0VDD8 3507 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 ZW10O43264 779 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 RASGRP1O95267 797 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 GABRB1P18505 474 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 HNRNPA2B1P22626 353 aaKnown RBP20.31■□□□□ 0.84
CLN6-224ENST00000638076 TSFMP43897 325 aaKnown RBP20.31■□□□□ 0.84
CLN6-224ENST00000638076 KHKP50053 298 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 TFF2Q03403 129 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 MLIPQ5VWP3 458 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 TMEM64Q6YI46 380 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 LACC1Q8IV20 430 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 DNAJC22Q8N4W6 341 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 KCT2Q8NC54 265 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 RPLP0P6Q8NHW5 317 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 IMPAD1Q9NX62 359 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 ENOPH1Q9UHY7 261 aa20.31■□□□□ 0.84
CLN6-224ENST00000638076 TMCC3Q9ULS5 477 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms