RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	TSN	Q15631	228 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	HACD4	Q5VWC8	232 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	MEDAG	Q5VYS4	303 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	STX12	Q86Y82	276 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	STK40	Q8N2I9	435 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	STPG2	Q8N412	459 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	PLA2G15	Q8NCC3	412 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	ATP6V1C2	Q8NEY4	427 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	OR11H7	Q8NGC8	314 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	ZFPM2	Q8WW38	1151 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	GBF1	Q92538	1859 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	OTULIN	Q96BN8	352 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	AARSD1	Q9BTE6	412 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	SLC29A3	Q9BZD2	475 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	DNTTIP1	Q9H147	329 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	OR51J1	Q9H342	316 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	FN3K	Q9H479	309 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	GSN-AS1	Q9NRJ2	163 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	NDUFB11	Q9NX14	153 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	TAS2R13	Q9NYV9	303 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	EDAR	Q9UNE0	448 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	LSM2	Q9Y333	95 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	NPTN	Q9Y639	398 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	LOC102723532	A0A0G2JNH3	316 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306		A0A1B0GW55	424 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306		A8MVJ9	347 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	EIF1B	O60739	113 aa	Known RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	TBL1X	O60907	577 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	SOX30	O94993	753 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	FGF19	O95750	216 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	LRG1	P02750	347 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	ESR1	P03372	595 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DUX4L2	P0CJ85	424 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DUX4L3	P0CJ86	424 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DUX4L4	P0CJ87	422 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DUX4L5	P0CJ88	424 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DUX4L6	P0CJ89	424 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DUX4L7	P0CJ90	424 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	S100P	P25815	95 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	APEX1	P27695	318 aa	Known RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	EIF1	P41567	113 aa	Known RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	ARSD	P51689	593 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	RAG2	P55895	527 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	RHOA	P61586	193 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	REL	Q04864	619 aa	Predicted RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	MAP4K2	Q12851	820 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	HNRNPA0	Q13151	305 aa	Known RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	ZNF124	Q15973	351 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	SNAPC1	Q16533	368 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	SWI5	Q1ZZU3	235 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	MICB	Q29980	383 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	AP5B1	Q2VPB7	878 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	TTLL9	Q3SXZ7	439 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	C3orf38	Q5JPI3	329 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	CXorf57	Q6NSI4	855 aa	Known RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	GCNT7	Q6ZNI0	430 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	C12orf40	Q86WS4	652 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	SLC44A2	Q8IWA5	706 aa	Predicted RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	MSRB3	Q8IXL7	192 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	FAM9C	Q8IZT9	166 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	CPXM2	Q8N436	756 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	NKAP	Q8N5F7	415 aa	Known RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	B3GNT7	Q8NFL0	401 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	OR2T11	Q8NH01	316 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	GANC	Q8TET4	914 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	PCNP	Q8WW12	178 aa	Known RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	MYEOV	Q96EZ4	313 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	OTUB1	Q96FW1	271 aa	Predicted RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	ATOH8	Q96SQ7	321 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	PIP5K1A	Q99755	562 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	GAL3ST1	Q99999	423 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	CPPED1	Q9BRF8	314 aa	Predicted RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DPH7	Q9BTV6	452 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	ABCG4	Q9H172	646 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	THUMPD1	Q9NXG2	353 aa	Known RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DUX4	Q9UBX2	424 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	DUSP12	Q9UNI6	340 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	POFUT2	Q9Y2G5	429 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	RAI2	Q9Y5P3	530 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	NUBP2	Q9Y5Y2	271 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	AP1M2	Q9Y6Q5	423 aa		10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	HELZ	P42694	1942 aa	Known RBP	10.25	□□□□□ -0.77
CHD2-223	ENST00000636306	TRABD2B	A6NFA1	517 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306		H3BM21	787 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	WWP2	O00308	870 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	PER2	O15055	1255 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	TSPAN3	O60637	253 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	SIX3	O95343	332 aa	Predicted RBP	10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	PLAT	P00750	562 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	KLKB1	P03952	638 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	IL6	P05231	212 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	NMB	P08949	121 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	SULT1A3	P0DMM9	295 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	SULT1A4	P0DMN0	295 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	PEPD	P12955	493 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	ANXA8	P13928	327 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	MTHFD2	P13995	350 aa		10.24	□□□□□ -0.77
CHD2-223	ENST00000636306	JUP	P14923	745 aa		10.24	□□□□□ -0.77

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