RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, human

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00339-208	ENST00000634934	MRPL19	P49406	292 aa	Known RBP	13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	NUDT2	P50583	147 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	FOXL2	P58012	376 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	SLC13A2	Q13183	592 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	MAP7	Q14244	749 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	TRIP10	Q15642	601 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	ADRM1	Q16186	407 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	AGK	Q53H12	422 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	RNF220	Q5VTB9	566 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	OR7A2P	Q8NGA2	310 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	OR9I1	Q8NGQ6	314 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	CT55	Q8WUE5	264 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	EXOSC8	Q96B26	276 aa	Known RBP	13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	PPCDC	Q96CD2	204 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	ASB9	Q96DX5	294 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	TEX37	Q96LM6	180 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	SOX17	Q9H6I2	414 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZNF696	Q9H7X3	374 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	VCX3A	Q9NNX9	186 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	C14orf105	Q9NVL8	296 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	SH3BP4	Q9P0V3	963 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	EXO1	Q9UQ84	846 aa	Known RBP	13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	DTNA	Q9Y4J8	743 aa		13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	MAP1B	P46821	2468 aa	Known RBP	13.58	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZZEF1	O43149	2961 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	IGLV3-12	A0A075B6K2	115 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	LOC100653049	A0A140TA62	436 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	PRMT3	O60678	531 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	CNOT3	O75175	753 aa	Known RBP	13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	ERAL1	O75616	437 aa	Known RBP	13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	KRT34	O76011	436 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	PDE5A	O76074	875 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	FURIN	P09958	794 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZGLP1	P0C6A0	271 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	IL12A	P29459	219 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	RPL3	P39023	403 aa	Known RBP	13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	ID2	Q02363	134 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	FLOT2	Q14254	428 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	NCF4	Q15080	339 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	PDK3	Q15120	406 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	NKG7	Q16617	165 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	PGS1	Q32NB8	556 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	MMEL1	Q495T6	779 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	CPTP	Q5TA50	214 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	SLC48A1	Q6P1K1	146 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	MRPL14	Q6P1L8	145 aa	Known RBP	13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	BORA	Q6PGQ7	559 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	OR4N5	Q8IXE1	308 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	RIMKLA	Q8IXN7	391 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZNF595	Q8IYB9	648 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	STARD8	Q92502	1023 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	TANK	Q92844	425 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZNF578	Q96N58	590 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	PRPF18	Q99633	342 aa	Known RBP	13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	TGIF2	Q9GZN2	237 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	SLC26A1	Q9H2B4	701 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	CCDC86	Q9H6F5	360 aa	Known RBP	13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	PRTFDC1	Q9NRG1	225 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	LANCL2	Q9NS86	450 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	TMEM45A	Q9NWC5	275 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	CCDC167	Q9P0B6	97 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	CROT	Q9UKG9	612 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	UTS2R	Q9UKP6	389 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	PSME2	Q9UL46	239 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	MKL2	Q9ULH7	1088 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	MAPRE3	Q9UPY8	281 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	FER1L5	A0AVI2	2057 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	SDK2	Q58EX2	2172 aa		13.57	□□□□□ -0.24
LINC00339-208	ENST00000634934	MYOCOS	A0A1B0GUC4	107 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	BLACE	A4D250	179 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	ENO4	A6NNW6	628 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	GABRR3	A8MPY1	467 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	LDB3	O75112	727 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	HEXB	P07686	556 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	MAOA	P21397	527 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	STAT5A	P42229	794 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	AQP4	P55087	323 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	BTG2	P78543	158 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	UGT8	Q16880	541 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	TBC1D25	Q3MII6	688 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	FAM180B	Q6P0A1	224 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	LAPTM4B	Q86VI4	370 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	IL22RA1	Q8N6P7	574 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	DNAJB14	Q8TBM8	379 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	NKD1	Q969G9	470 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	MTERF3	Q96E29	417 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	DTNBP1	Q96EV8	351 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	PTCHD1	Q96NR3	888 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	CLMP	Q9H6B4	373 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	EHD3	Q9NZN3	535 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	ATP6V1H	Q9UI12	483 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	NXT1	Q9UKK6	140 aa	Known RBP	13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	ACSL6	Q9UKU0	697 aa		13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	PTRH2	Q9Y3E5	179 aa	Known RBP	13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	AHCTF1	Q8WYP5	2266 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms