RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 EPOP01588 193 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 FESP07332 822 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 UBTFL6P0CB48 400 aaPredicted RBP4.58□□□□□ -1.68
LINC00550-201ENST00000629293 CCDC166P0CW27 439 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 TNFSF4P23510 183 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 PDHA2P29803 388 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 GRIA3P42263 894 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 SLC12A2P55011 1212 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 MS4A2Q01362 244 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 TRIP10Q15642 601 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 TYSND1Q2T9J0 566 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 UGT3A2Q3SY77 523 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 DCAF10Q5QP82 559 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF678Q5SXM1 525 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 FAM45BPQ6NSW5 357 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF549Q6P9A3 640 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 FAM198BQ6UWH4 519 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 WASH2PQ6VEQ5 465 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 MED25Q71SY5 747 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 ISCA2Q86U28 154 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 WFDC3Q8IUB2 231 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 SLC22A9Q8IVM8 553 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 OR13C4Q8NGS5 318 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 DNAJB14Q8TBM8 379 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 FAM45AQ8TCE6 357 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 UBE2FQ969M7 185 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 PTERQ96BW5 349 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 CDRT15Q96T59 188 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 CD180Q99467 661 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 YIPF2Q9BWQ6 316 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 SPRTNQ9H040 489 aaPredicted RBP4.58□□□□□ -1.68
LINC00550-201ENST00000629293 KIR3DX1Q9H7L2 352 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 EML4Q9HC35 981 aaKnown RBP4.58□□□□□ -1.68
LINC00550-201ENST00000629293 IL17CQ9P0M4 197 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 VWA7Q9Y334 891 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 PDZD2O15018 2839 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 A0A087WV62 115 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 C2orf81A6NN90 581 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 ISM1B1AKI9 464 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 BTN3A1O00481 513 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 FBP2O00757 339 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 AHCYL1O43865 530 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 C8BP07358 591 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 PRSS56P0CW18 603 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 PRF1P14222 555 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 IMPDH1P20839 514 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 ME2P23368 584 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 KCNC1P48547 511 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 CLCN2P51788 898 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 BOP1Q14137 746 aaKnown RBP4.58□□□□□ -1.68
LINC00550-201ENST00000629293 FLOT2Q14254 428 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 SEMA3AQ14563 771 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 UNC50Q53HI1 259 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 METRNLQ641Q3 311 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 KLC3Q6P597 504 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 UGT2A3Q6UWM9 527 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 HACD2Q6Y1H2 254 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 TTLL10Q6ZVT0 673 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 LILRA2Q8N149 483 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 MARVELD2Q8N4S9 558 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 TM9SF4Q92544 642 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 HDAC10Q969S8 669 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 FER1L6-AS2Q96M78 137 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 YIPF3Q9GZM5 350 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 EFCAB1Q9HAE3 211 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 FAM60AQ9NP50 221 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 PACSIN3Q9UKS6 424 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 POMT2Q9UKY4 750 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 ASF1AQ9Y294 204 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 ATP23Q9Y6H3 246 aa4.58□□□□□ -1.68
LINC00550-201ENST00000629293 OR51F1A6NGY5 319 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 STX16-NPEPL1H3BU86 382 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 DENRO43583 198 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 HCRTR1O43613 425 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 SMIM18P0DKX4 95 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 GLI4P10075 376 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 MTHFD2P13995 350 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 CD1DP15813 335 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 OGNP20774 298 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 PKNOX1P55347 436 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 LGALS4P56470 323 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 NKX6-1P78426 367 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 MRPS22P82650 360 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 TSTA3Q13630 321 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 LAMB3Q13751 1172 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 PPP1R3AQ16821 1122 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 C1QL3Q5VWW1 255 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 REP15Q6BDI9 236 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 LARP4Q71RC2 724 aaKnown RBP eCLIP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 SDCCAG8Q86SQ7 713 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 KMT5CQ86Y97 462 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 HIPK4Q8NE63 616 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 OR52E1Q8NGJ3 308 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ADAMTS17Q8TE56 1095 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 GRHL3Q8TE85 626 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 TFGQ92734 400 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ASB9Q96DX5 294 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 DUS3LQ96G46 650 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 FCRL4Q96PJ5 515 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms