RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 POLR3HQ9Y535 204 aaPredicted RBP12.72□□□□□ -0.37
PFDN5-220ENST00000628881 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
PFDN5-220ENST00000628881 A0A1W2PS29 197 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 FCHO1O14526 889 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 LSM1O15116 133 aaKnown RBP12.71□□□□□ -0.37
PFDN5-220ENST00000628881 PRKNO60260 465 aaPredicted RBP12.71□□□□□ -0.37
PFDN5-220ENST00000628881 SEC22BO75396 215 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 ERAL1O75616 437 aaKnown RBP12.71□□□□□ -0.37
PFDN5-220ENST00000628881 PORP16435 677 aaPredicted RBP12.71□□□□□ -0.37
PFDN5-220ENST00000628881 CSNK2A2P19784 350 aaPredicted RBP12.71□□□□□ -0.37
PFDN5-220ENST00000628881 SLC1A6P48664 564 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 MLLT10P55197 1068 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 ERVK-8P63133 956 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 STX3Q13277 289 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 TUBA3CQ13748 450 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 XKR7Q5GH72 579 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 TUBA3EQ6PEY2 450 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 SUN3Q8TAQ9 357 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 MGARPQ8TDB4 240 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 THAP3Q8WTV1 239 aaPredicted RBP12.71□□□□□ -0.37
PFDN5-220ENST00000628881 FCRL1Q96LA6 429 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 CCT7Q99832 543 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 SH3GL2Q99962 352 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 UTP23Q9BRU9 249 aaKnown RBP12.71□□□□□ -0.37
PFDN5-220ENST00000628881 CNPPD1Q9BV87 410 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 CXorf21Q9HAI6 301 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 MYNNQ9NPC7 610 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 EHD3Q9NZN3 535 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 UTS2RQ9UKP6 389 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 ERVK-19Q9WJR5 959 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.71□□□□□ -0.37
PFDN5-220ENST00000628881 TMED5Q9Y3A6 229 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 RAP2CQ9Y3L5 183 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 ZNF780BQ9Y6R6 833 aa12.71□□□□□ -0.37
PFDN5-220ENST00000628881 TMEM200CA6NKL6 621 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 HRKO00198 91 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 DDCP20711 480 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 TRHRP34981 398 aaPredicted RBP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 FEN1P39748 380 aaKnown RBP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 CD96P40200 585 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 RPL38P63173 70 aaKnown RBP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 RNF4P78317 190 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 C2orf80Q0P641 193 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 BST1Q10588 318 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 ZNF267Q14586 743 aaPredicted RBP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 ZNF750Q32MQ0 723 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 C6orf163Q5TEZ5 329 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 FAM71E1Q6IPT2 247 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 RPUSD3Q6P087 351 aaKnown RBP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 IKBIPQ70UQ0 350 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 GALNT12Q8IXK2 581 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 SAMD14Q8IZD0 417 aaPredicted RBP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 KIRREL3Q8IZU9 778 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 ZNF781Q8N8C0 355 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 CDC26Q8NHZ8 85 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 CPT1CQ8TCG5 803 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 CNRIP1Q96F85 164 aaPredicted RBP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 ATP6V1G3Q96LB4 118 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 PPP3R2Q96LZ3 170 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 SORT1Q99523 831 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 TRIM4Q9C037 500 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 C20orf27Q9GZN8 174 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 ZNF395Q9H8N7 513 aaPredicted RBP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 PFDN4Q9NQP4 134 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.7□□□□□ -0.38
PFDN5-220ENST00000628881 HAO1Q9UJM8 370 aa12.7□□□□□ -0.38
PFDN5-220ENST00000628881 J3QKU1 62 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 PRAMEF2O60811 474 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 SKAP2O75563 359 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-220ENST00000628881 ITGA10O75578 1167 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 ATP1B1P05026 303 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 CT62P0C5K7 136 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 NT5EP21589 574 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 HK2P52789 917 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 OC90Q02509 493 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-220ENST00000628881 DUSP2Q05923 314 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 OR1C1Q15619 314 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 INPP5JQ15735 1006 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-220ENST00000628881 INAQ16352 499 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 GALNTL6Q49A17 601 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 RFTN2Q52LD8 501 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-220ENST00000628881 PRR30Q53SZ7 412 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-220ENST00000628881 TTMPQ5BVD1 217 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 RNF111Q6ZNA4 994 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 C9orf40Q8IXQ3 194 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 LRRC25Q8N386 305 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-220ENST00000628881 HORMAD2Q8N7B1 307 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 GOLGA6L1Q8N7Z2 621 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 MDS2Q8NDY4 140 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 OR5L2Q8NGL0 311 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 NUBPLQ8TB37 319 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 RAB3IL1Q8TBN0 382 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 DOK4Q8TEW6 326 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 EXOSC8Q96B26 276 aaKnown RBP12.69□□□□□ -0.38
PFDN5-220ENST00000628881 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 ZNF681Q96N22 645 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 SIGLEC12Q96PQ1 595 aa12.69□□□□□ -0.38
PFDN5-220ENST00000628881 TRIM45Q9H8W5 580 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-220ENST00000628881 GIMAP4Q9NUV9 329 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms