RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-213ENST00000622183 TMEM37Q8WXS4 190 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 PNPLA2Q96AD5 504 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 AGAP4Q96P64 663 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 ACCSQ96QU6 501 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 FGFBP2Q9BYJ0 223 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 EGLN1Q9GZT9 426 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 FAM124BQ9H5Z6 455 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-213ENST00000622183 ECT2Q9H8V3 914 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 ROPN1Q9HAT0 212 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-213ENST00000622183 SLC25A19Q9HC21 320 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 ANKMY1Q9P2S6 941 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 SLC6A5Q9Y345 797 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 ATP6V0A2Q9Y487 856 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 LOC390937A0A1W2PQ73 354 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF724A8MTY0 619 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 F8WDY8 70 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 K7EPI3 171 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 BUB1O43683 1085 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 AKR7A3O95154 331 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 TMOD1P28289 359 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 PTPN4P29074 926 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 PPP2R1AP30153 589 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 PRDX2P32119 198 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF131P52739 623 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 RPS27AP62979 156 aaKnown RBP4.1□□□□□ -1.75
CPNE3-213ENST00000622183 PMP22Q01453 160 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 CALCOCO2Q13137 446 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 SCGB2A2Q13296 93 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 ITPK1Q13572 414 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 HAGHQ16775 308 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 ZSWIM7Q19AV6 140 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 LDLRAP1Q5SW96 308 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 LIPKQ5VXJ0 399 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 RHBDD2Q6NTF9 364 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 GDPGP1Q6ZNW5 385 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 KCNMB4Q86W47 210 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 LINC00518Q8N0U6 118 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 AQP11Q8NBQ7 271 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 ICA1LQ8NDH6 482 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 DEFB118Q96PH6 123 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 NDUFAF3Q9BU61 184 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 CCSER1Q9C0I3 900 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 WDR41Q9HAD4 459 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 MIOXQ9UGB7 285 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 NIP7Q9Y221 180 aaKnown RBP eCLIP4.1□□□□□ -1.75
CPNE3-213ENST00000622183 PTPRUQ92729 1446 aa4.1□□□□□ -1.75
CPNE3-213ENST00000622183 IGHV4-30-2A0A087WSY4 118 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 TRBV5-4A0A0C4DH59 114 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 FBP2O00757 339 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ARHGEF9O43307 516 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ZG16O60844 167 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 GP9P14770 177 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 CD1DP15813 335 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 MAT2AP31153 395 aaKnown RBP4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ID1P41134 155 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ATP12AP54707 1039 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 PEX3P56589 373 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 RPS4XP62701 263 aaKnown RBP4.09□□□□□ -1.75
CPNE3-213ENST00000622183 PRKCEQ02156 737 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 BTG3Q14201 252 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-213ENST00000622183 NECTIN1Q15223 517 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ECSCRQ19T08 205 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 HKDC1Q2TB90 917 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 HSP90AA5PQ58FG0 334 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 STEAP1BQ6NZ63 245 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 MCM10Q7L590 875 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 LRRTM1Q86UE6 522 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 AMZ2Q86W34 360 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 CERS5Q8N5B7 392 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 MLKLQ8NB16 471 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 RELL2Q8NC24 303 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-213ENST00000622183 CHDHQ8NE62 594 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-213ENST00000622183 PCNPQ8WW12 178 aaKnown RBP4.09□□□□□ -1.75
CPNE3-213ENST00000622183 FCGR1BQ92637 280 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 NCLNQ969V3 563 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 TSGA13Q96PP4 275 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 TNFRSF13CQ96RJ3 184 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 OPRPNQ99935 248 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-213ENST00000622183 NLNQ9BYT8 704 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 UPF3AQ9H1J1 476 aaKnown RBP4.09□□□□□ -1.75
CPNE3-213ENST00000622183 DCTPP1Q9H773 170 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ZDHHC18Q9NUE0 388 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 THYN1Q9P016 225 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 THEGQ9P2T0 379 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 TUBGCP4Q9UGJ1 667 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ASIC3Q9UHC3 531 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 BCAP29Q9UHQ4 241 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF490Q9ULM2 529 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-213ENST00000622183 KLHDC2Q9Y2U9 406 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF175Q9Y473 711 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 ATG4BQ9Y4P1 393 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 U3KQV3 271 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 RAD54L2Q9Y4B4 1467 aa4.09□□□□□ -1.75
CPNE3-213ENST00000622183 WDR81Q562E7 1941 aa4.09□□□□□ -1.76
CPNE3-213ENST00000622183 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 NEDD8-MDP1E9PL57 170 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 SMPD2O60906 423 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 GUCA1CO95843 209 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 IFNB1P01574 187 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms