RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 HTR3EA5X5Y0 456 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 CETN3O15182 167 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 OGTO15294 1046 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 POLR2DO15514 142 aaKnown RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 BUB1O43683 1085 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 CACNG3O60359 315 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 DIRAS3O95661 229 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 S100A9P06702 114 aaKnown RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 MYL6BP14649 208 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 GALP22466 123 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 GLRA2P23416 452 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 ACAT1P24752 427 aaKnown RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 RPA1P27694 616 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 CCND2P30279 289 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 PKLRP30613 574 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 ADARP55265 1226 aaKnown RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 ABCE1P61221 599 aaKnown RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 HAND2P61296 217 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 ACY1Q03154 408 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 RIPPLY2Q5TAB7 128 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 METTL11BQ5VVY1 283 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 FAM166AQ6J272 317 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 ENPP7Q6UWV6 458 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 VITQ6UXI7 678 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 CATSPER3Q86XQ3 398 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 LRRC49Q8IUZ0 686 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 ELMOD2Q8IZ81 293 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 APCDD1Q8J025 514 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 KDM8Q8N371 416 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 ZCCHC7Q8N3Z6 543 aaKnown RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 C4orf32Q8N8J7 132 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 FAM184AQ8NB25 1140 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 KLHL30-AS1Q8NEE0 82 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 RAPGEF5Q92565 580 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 C11orf24Q96F05 449 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 PIWIL1Q96J94 861 aaKnown RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 TCEANC2Q96MN5 208 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 CCDC77Q9BR77 488 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 KATNB1Q9BVA0 655 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 SNX25Q9H3E2 840 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 COQ10BQ9H8M1 238 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 PRMT8Q9NR22 394 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 IARS2Q9NSE4 1012 aaKnown RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 TMOD3Q9NYL9 352 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 ARMCX3Q9UH62 379 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-229ENST00000621897 LIPGQ9Y5X9 500 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 COLEC10Q9Y6Z7 277 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 KIF7Q2M1P5 1343 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 ANXA2P2A6NMY6 339 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 E9PBE3 544 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 K7EQG2 157 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 SLC30A4O14863 429 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 CASC3O15234 703 aaKnown RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 SIGLEC5O15389 551 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 GMFGO60234 142 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 PRAF2O60831 178 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 ZNF254O75437 659 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 KRT8P05787 483 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 CCDC192P0DO97 292 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 AHCYP23526 432 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 LMO2P25791 158 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 SOAT1P35610 550 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 MAGEA8P43361 318 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 GSK3BP49841 420 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 VCPP55072 806 aaKnown RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 HADHBP55084 474 aaKnown RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 CTAG1AP78358 180 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 SPAG1Q07617 926 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 ITPK1Q13572 414 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 MLF2Q15773 248 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 TAZQ16635 292 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 HADHQ16836 314 aaKnown RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 KRTAP13-3Q3SY46 172 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 AARDQ4LEZ3 155 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 FBXO48Q5FWF7 155 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 METAP1DQ6UB28 335 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 AFTPHQ6ULP2 937 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 DHRS11Q6UWP2 260 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 TAS2R42Q7RTR8 314 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 AMIGO1Q86WK6 493 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 CARM1Q86X55 608 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 DND1Q8IYX4 353 aaKnown RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 GPD1LQ8N335 351 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 BBS5Q8N3I7 341 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 NHLRC2Q8NBF2 726 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 CAMKVQ8NCB2 501 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 CSNK1G2-AS1Q8NCQ2 148 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 BBOF1Q8ND07 529 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 LPCAT1Q8NF37 534 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 NEK11Q8NG66 645 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 OR13C2Q8NGS9 318 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 OR4Q3Q8NH05 313 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 GANCQ8TET4 914 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 THRSPQ92748 146 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 BCL2L2Q92843 193 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 C19orf60Q96EN9 201 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 PARK7Q99497 189 aaKnown RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 THUMPD2Q9BTF0 503 aaKnown RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 GTPBP2Q9BX10 602 aaKnown RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 ZNF350Q9GZX5 532 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms