RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 UPK1AO00322 258 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 FABP3P05413 133 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 MC3RP41968 323 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 MAGEA2P43356 314 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 GABRA4P48169 554 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 CRYBA2P53672 197 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 RAB38P57729 211 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 SKP1P63208 163 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 GPLD1P80108 840 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 LTB4RQ15722 352 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 ARHGEF39Q8N4T4 335 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 COL26A1Q96A83 441 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 TBC1D20Q96BZ9 403 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 SDCCAG3Q96C92 435 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 SERHL2Q9H4I8 314 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 IL1RAPQ9NPH3 570 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 THUMPD1Q9NXG2 353 aaKnown RBP20.19■□□□□ 0.82
SPAST-204ENST00000621856 A0A0A6YYC8 382 aaPredicted RBP20.19■□□□□ 0.82
SPAST-204ENST00000621856 I3L1I5 382 aaPredicted RBP20.19■□□□□ 0.82
SPAST-204ENST00000621856 hCG_2039718K7EN88 272 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 HMGN4O00479 90 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 EI24O14681 340 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 SEMG1P04279 462 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 OR12D1P0DN82 309 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 SEPHS1P49903 392 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 ID2Q02363 134 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 ELOAQ14241 798 aaKnown RBP20.19■□□□□ 0.82
SPAST-204ENST00000621856 NR1D2Q14995 579 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 SNAP47Q5SQN1 464 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 USP53Q70EK8 1073 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 KANSL1Q7Z3B3 1105 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 PATL1Q86TB9 770 aaKnown RBP20.19■□□□□ 0.82
SPAST-204ENST00000621856 LZICQ8WZA0 190 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 KAT2AQ92830 837 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 CCDC74AQ96AQ1 378 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 TAMM41Q96BW9 452 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 ELP4Q96EB1 424 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 ZC3H10Q96K80 434 aaKnown RBP20.19■□□□□ 0.82
SPAST-204ENST00000621856 DOHHQ9BU89 302 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 CHRNA10Q9GZZ6 450 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 HYKKA2RU49 373 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 FAM227AF5H4B4 570 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 M0QX08 132 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 CYR61O00622 381 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 CPMP14384 443 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 SELENOWP63302 87 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 LASP1Q14847 261 aaKnown RBP20.18■□□□□ 0.82
SPAST-204ENST00000621856 CRB2Q5IJ48 1285 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 TCTE1Q5JU00 501 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 CARFQ8N187 725 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 NUP43Q8NFH3 380 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 OR5D16Q8NGK9 328 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 SLC38A5Q8WUX1 472 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 TMEM19Q96HH6 336 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 ZNF285Q96NJ3 590 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 YIPF4Q9BSR8 244 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 OSBPL11Q9BXB4 747 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 P2RX2Q9UBL9 471 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 ZNF639Q9UID6 485 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 RAB23Q9ULC3 237 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 DNAH14Q0VDD8 3507 aa20.18■□□□□ 0.82
SPAST-204ENST00000621856 CABIN1Q9Y6J0 2220 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 CHST10O43529 356 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 DENRO43583 198 aaKnown RBP20.17■□□□□ 0.82
SPAST-204ENST00000621856 SLC28A2O43868 658 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 LDB3O75112 727 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 E2F6O75461 281 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 HMGN2P05204 90 aaKnown RBP20.17■□□□□ 0.82
SPAST-204ENST00000621856 PORP16435 677 aaPredicted RBP20.17■□□□□ 0.82
SPAST-204ENST00000621856 MAGEA8P43361 318 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 PCBP3P57721 371 aaKnown RBP20.17■□□□□ 0.82
SPAST-204ENST00000621856 MYBPC3Q14896 1274 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 NR0B2Q15466 257 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 RPS26P11Q5JNZ5 115 aaPredicted RBP20.17■□□□□ 0.82
SPAST-204ENST00000621856 OTUD3Q5T2D3 398 aaPredicted RBP20.17■□□□□ 0.82
SPAST-204ENST00000621856 PEAR1Q5VY43 1037 aaPredicted RBP20.17■□□□□ 0.82
SPAST-204ENST00000621856 NIPAL1Q6NVV3 410 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 STK32CQ86UX6 486 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 ZDHHC13Q8IUH4 622 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 TMEM52Q8NDY8 209 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 SAP25Q8TEE9 199 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 XAGE5Q8WWM1 108 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 TANKQ92844 425 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 NR1H4Q96RI1 486 aaPredicted RBP20.17■□□□□ 0.82
SPAST-204ENST00000621856 GAREM1Q9H706 876 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 ABCG2Q9UNQ0 655 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 ADAMTS9Q9P2N4 1935 aa20.17■□□□□ 0.82
SPAST-204ENST00000621856 G3V2T6 193 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 YKT6O15498 198 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 MED26O95402 600 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 TFPTP0C1Z6 253 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 CD1CP29017 333 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 CSF2RBP32927 897 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 CLCN2P51788 898 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 IST1P53990 364 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 KCNJ10P78508 379 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 HSD11B2P80365 405 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 VLDLRP98155 873 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 CFHR1Q03591 330 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 KCNAB1Q14722 419 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms